Entry: PS01002

General information about the entry

Entry name [info] TCTP_1
Accession [info] PS01002
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); APR-2006 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00768

Name and characterization of the entry

Description [info] Translationally controlled tumor protein signature 1.
Pattern [info]
[IFAED]-[GA]-[GASF]-N-[PAK]-S-[GTA]-E-[GDEVCF]-[PAGEQV]-[DEQGAV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 66 in 66 different sequences
Number of true positive hits 66 in 66 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 18
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 78.57 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
66 sequences

TCTP1_ARATH (P31265    ), TCTP_AEDAE  (Q1HR79    ), TCTP_AEDAL  (Q5MIP6    ), 
TCTP_ANOGA  (Q7QCK2    ), TCTP_ASPFU  (Q4WRB8    ), TCTP_ASPOR  (Q2UR29    ), 
TCTP_BOMMO  (Q75VN3    ), TCTP_BOVIN  (Q5E984    ), TCTP_BRABE  (Q95VY2    ), 
TCTP_BRAOL  (Q944W6    ), TCTP_BRUMA  (P90697    ), TCTP_CAEBR  (Q622B7    ), 
TCTP_CAEEL  (Q93573    ), TCTP_CANAL  (Q5A860    ), TCTP_CANGA  (Q6FKB6    ), 
TCTP_CHICK  (P43347    ), TCTP_CROAD  (J3SFJ3    ), TCTP_CROHD  (T1DKS4    ), 
TCTP_CRYNB  (P0CR83    ), TCTP_CRYNJ  (P0CR82    ), TCTP_CUCME  (Q9M5I8    ), 
TCTP_DANRE  (Q9DGK4    ), TCTP_DEBHA  (Q6BP09    ), TCTP_DROME  (Q9VGS2    ), 
TCTP_DROPS  (Q293Y0    ), TCTP_DROYA  (Q6XIN1    ), TCTP_ELAGV  (Q5J907    ), 
TCTP_EMENI  (Q5BFN9    ), TCTP_FRAAN  (O03992    ), TCTP_GIBZE  (Q4IJT5    ), 
TCTP_HEVBR  (Q9ZSW9    ), TCTP_HORVU  (Q9M5G3    ), TCTP_HUMAN  (P13693    ), 
TCTP_HYDVU  (Q94587    ), TCTP_IXOSC  (Q4PLZ3    ), TCTP_KLULA  (Q6CTH3    ), 
TCTP_LABRO  (Q98SJ7    ), TCTP_LONON  (Q5MGM6    ), TCTP_LUMRU  (O18477    ), 
TCTP_MAIZE  (Q8H6A5    ), TCTP_MEDSA  (P28014    ), TCTP_MOUSE  (P63028    ), 
TCTP_NEUCR  (Q7RYV5    ), TCTP_ORYSJ  (P35681    ), TCTP_PANTR  (A5A6K2    ), 
TCTP_PEA    (P50906    ), TCTP_PIG    (P61288    ), TCTP_PLUXY  (Q60FS1    ), 
TCTP_PSEMZ  (Q9ZRX0    ), TCTP_RABIT  (P43348    ), TCTP_RAT    (P63029    ), 
TCTP_SCHHA  (Q8I8A2    ), TCTP_SCHJA  (P91800    ), TCTP_SCHMA  (Q95WA2    ), 
TCTP_SCHPO  (Q10344    ), TCTP_SOLTU  (P43349    ), TCTP_SOYBN  (Q944T2    ), 
TCTP_TOBAC  (Q9XHL7    ), TCTP_USTMA  (Q4PF30    ), TCTP_WHEAT  (Q8LRM8    ), 
TCTP_WUCBA  (Q962A2    ), TCTP_XENLA  (Q7ZYF2    ), TCTP_XENTR  (Q66JC5    ), 
TCTP_YARLI  (Q6C4G1    ), TCTP_YEAST  (P35691    ), TPT1L_HUMAN (Q56UQ5    )
» more

UniProtKB/Swiss-Prot
False negative sequences
18 sequences

TCTP1_DICDI (Q54RX6    ), TCTP2_DICDI (Q54RX1    ), TCTP8_HUMAN (Q9HAU6    ), 
TCTP_CUCMA  (Q2PS27    ), TCTP_GRARO  (M5B4R7    ), TCTP_LATJA  (Q6XSH4    ), 
TCTP_LOXIN  (G3LU44    ), TCTP_MICFL  (U3EQ60    ), TCTP_PLABA  (Q4YZC6    ), 
TCTP_PLACH  (Q4XFJ8    ), TCTP_PLAF7  (Q8I3Z5    ), TCTP_PLAKN  (P84152    ), 
TCTP_PLAYO  (Q9XYU2    ), TCTP_SCOMX  (Q202I6    ), TCTP_SOLLC  (Q6DUX3    ), 
TCTP_THEAN  (Q4UGL5    ), TCTP_THEPA  (Q4N938    ), TCTP_TRIPS  (Q2L875    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

TCTP2_PSEMZ (P85905    ), TCTP_TRYBB  (P35758    )

		
PDB
[Detailed view]
5 PDB

1H6Q; 1H7Y; 2HR9; 2KWB; 2LOY

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