Entry: PS01002

General information about the entry
Entry name TCTP_1
Accession number PS01002
Entry type PATTERN
Date JUN-1994 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00768
Name and characterization of the entry
DescriptionTranslationally controlled tumor protein signature 1.
Pattern [IFAED]-[GA]-[GASF]-N-[PAK]-S-[GTA]-E-[GDEVCF]-[PAGEQV]-[DEQGAV].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 64 hits in 64 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 64 hits in 64 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 15
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 2
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 81.01 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
TCTP_AEDAE  (Q1HR79), TCTP_AEDAL  (Q5MIP6), TCTP_ANOGA  (Q7QCK2), 
TCTP_ARATH  (P31265), TCTP_ASPFU  (Q4WRB8), TCTP_ASPOR  (Q2UR29), 
TCTP_BOMMO  (Q75VN3), TCTP_BOVIN  (Q5E984), TCTP_BRABE  (Q95VY2), 
TCTP_BRAOL  (Q944W6), TCTP_BRUMA  (P90697), TCTP_CAEBR  (Q622B7), 
TCTP_CAEEL  (Q93573), TCTP_CANAL  (Q5A860), TCTP_CANGA  (Q6FKB6), 
TCTP_CHICK  (P43347), TCTP_CRYNB  (P0CR83), TCTP_CRYNJ  (P0CR82), 
TCTP_CUCME  (Q9M5I8), TCTP_DANRE  (Q9DGK4), TCTP_DEBHA  (Q6BP09), 
TCTP_DROME  (Q9VGS2), TCTP_DROPS  (Q293Y0), TCTP_DROYA  (Q6XIN1), 
TCTP_ELAGV  (Q5J907), TCTP_EMENI  (Q5BFN9), TCTP_FRAAN  (O03992), 
TCTP_GIBZE  (Q4IJT5), TCTP_HEVBR  (Q9ZSW9), TCTP_HORVU  (Q9M5G3), 
TCTP_HUMAN  (P13693), TCTP_HYDVU  (Q94587), TCTP_IXOSC  (Q4PLZ3), 
TCTP_KLULA  (Q6CTH3), TCTP_LABRO  (Q98SJ7), TCTP_LONON  (Q5MGM6), 
TCTP_LUMRU  (O18477), TCTP_MAIZE  (Q8H6A5), TCTP_MEDSA  (P28014), 
TCTP_MOUSE  (P63028), TCTP_NEUCR  (Q7RYV5), TCTP_ORYSJ  (P35681), 
TCTP_PANTR  (A5A6K2), TCTP_PEA    (P50906), TCTP_PIG    (P61288), 
TCTP_PLUXY  (Q60FS1), TCTP_PSEMZ  (Q9ZRX0), TCTP_RABIT  (P43348), 
TCTP_RAT    (P63029), TCTP_SCHHA  (Q8I8A2), TCTP_SCHJA  (P91800), 
TCTP_SCHMA  (Q95WA2), TCTP_SCHPO  (Q10344), TCTP_SOLTU  (P43349), 
TCTP_SOYBN  (Q944T2), TCTP_TOBAC  (Q9XHL7), TCTP_USTMA  (Q4PF30), 
TCTP_WHEAT  (Q8LRM8), TCTP_WUCBA  (Q962A2), TCTP_XENLA  (Q7ZYF2), 
TCTP_XENTR  (Q66JC5), TCTP_YARLI  (Q6C4G1), TCTP_YEAST  (P35691), 
TPT1L_HUMAN (Q56UQ5)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
FKSG2_HUMAN (Q9HAU6), TCTP1_DICDI (Q54RX6), TCTP2_DICDI (Q54RX1), 
TCTP_CUCMA  (Q2PS27), TCTP_LATJA  (Q6XSH4), TCTP_PLABA  (Q4YZC6), 
TCTP_PLACH  (Q4XFJ8), TCTP_PLAF7  (Q8I3Z5), TCTP_PLAKN  (P84152), 
TCTP_PLAYO  (Q9XYU2), TCTP_PSEMX  (Q202I6), TCTP_SOLLC  (Q6DUX3), 
TCTP_THEAN  (Q4UGL5), TCTP_THEPA  (Q4N938), TCTP_TRIPS  (Q2L875)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
TCTP2_PSEMZ (P85905), TCTP_TRYBB  (P35758)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1H6Q; 1H7Y; 2HR9; 2KWB; 2LOY;

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View entry in raw text format (no links)
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