Entry: PS01002

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General information about the entry

Entry name [info] TCTP_1
Accession [info] PS01002
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); APR-2006 (DATA UPDATE); FEB-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00768

Name and characterization of the entry

Description [info] Translationally controlled tumor protein signature 1.
Pattern [info]
[IFAED]-[GA]-[GASF]-N-[PAK]-S-[GTA]-E-[GDEVCF]-[PAGEQV]-[DEQGAV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_03 which contains 542'782 sequence entries.


Total number of hits 64 in 64 different sequences
Number of true positive hits 64 in 64 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 16
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 80.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
64 sequences

TCTP_AEDAE  (Q1HR79), TCTP_AEDAL  (Q5MIP6), TCTP_ANOGA  (Q7QCK2), 
TCTP_ARATH  (P31265), TCTP_ASPFU  (Q4WRB8), TCTP_ASPOR  (Q2UR29), 
TCTP_BOMMO  (Q75VN3), TCTP_BOVIN  (Q5E984), TCTP_BRABE  (Q95VY2), 
TCTP_BRAOL  (Q944W6), TCTP_BRUMA  (P90697), TCTP_CAEBR  (Q622B7), 
TCTP_CAEEL  (Q93573), TCTP_CANAL  (Q5A860), TCTP_CANGA  (Q6FKB6), 
TCTP_CHICK  (P43347), TCTP_CRYNB  (P0CR83), TCTP_CRYNJ  (P0CR82), 
TCTP_CUCME  (Q9M5I8), TCTP_DANRE  (Q9DGK4), TCTP_DEBHA  (Q6BP09), 
TCTP_DROME  (Q9VGS2), TCTP_DROPS  (Q293Y0), TCTP_DROYA  (Q6XIN1), 
TCTP_ELAGV  (Q5J907), TCTP_EMENI  (Q5BFN9), TCTP_FRAAN  (O03992), 
TCTP_GIBZE  (Q4IJT5), TCTP_HEVBR  (Q9ZSW9), TCTP_HORVU  (Q9M5G3), 
TCTP_HUMAN  (P13693), TCTP_HYDVU  (Q94587), TCTP_IXOSC  (Q4PLZ3), 
TCTP_KLULA  (Q6CTH3), TCTP_LABRO  (Q98SJ7), TCTP_LONON  (Q5MGM6), 
TCTP_LUMRU  (O18477), TCTP_MAIZE  (Q8H6A5), TCTP_MEDSA  (P28014), 
TCTP_MOUSE  (P63028), TCTP_NEUCR  (Q7RYV5), TCTP_ORYSJ  (P35681), 
TCTP_PANTR  (A5A6K2), TCTP_PEA    (P50906), TCTP_PIG    (P61288), 
TCTP_PLUXY  (Q60FS1), TCTP_PSEMZ  (Q9ZRX0), TCTP_RABIT  (P43348), 
TCTP_RAT    (P63029), TCTP_SCHHA  (Q8I8A2), TCTP_SCHJA  (P91800), 
TCTP_SCHMA  (Q95WA2), TCTP_SCHPO  (Q10344), TCTP_SOLTU  (P43349), 
TCTP_SOYBN  (Q944T2), TCTP_TOBAC  (Q9XHL7), TCTP_USTMA  (Q4PF30), 
TCTP_WHEAT  (Q8LRM8), TCTP_WUCBA  (Q962A2), TCTP_XENLA  (Q7ZYF2), 
TCTP_XENTR  (Q66JC5), TCTP_YARLI  (Q6C4G1), TCTP_YEAST  (P35691), 
TPT1L_HUMAN (Q56UQ5)
» More

UniProtKB/Swiss-Prot
False negative sequences
16 sequences

TCTP1_DICDI (Q54RX6), TCTP2_DICDI (Q54RX1), TCTP8_HUMAN (Q9HAU6), 
TCTP_CUCMA  (Q2PS27), TCTP_LATJA  (Q6XSH4), TCTP_LOXIN  (G3LU44), 
TCTP_PLABA  (Q4YZC6), TCTP_PLACH  (Q4XFJ8), TCTP_PLAF7  (Q8I3Z5), 
TCTP_PLAKN  (P84152), TCTP_PLAYO  (Q9XYU2), TCTP_PSEMX  (Q202I6), 
TCTP_SOLLC  (Q6DUX3), TCTP_THEAN  (Q4UGL5), TCTP_THEPA  (Q4N938), 
TCTP_TRIPS  (Q2L875)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

TCTP2_PSEMZ (P85905), TCTP_TRYBB  (P35758)

		
PDB
[Detailed view]
5 PDB

1H6Q; 1H7Y; 2HR9; 2KWB; 2LOY

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