Entry: PS01003

General information about the entry

Entry name [info] TCTP_2
Accession [info] PS01003
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); JAN-2002 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00768

Name and characterization of the entry

Description [info] Translationally controlled tumor protein signature 2.
Pattern [info]
[FLIV]-x(4)-[FLVH]-[FY]-[MIVCT]-G-E-x(4,7)-[DENP]-[GAST]-x-[LIVM]-[GAVI]-
x(3)-[FYWQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.


Total number of hits 71 in 71 different sequences
Number of true positive hits 71 in 71 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 14
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 83.53 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
71 sequences

TCTP1_ARATH (P31265), TCTP1_DICDI (Q54RX6), TCTP2_ARATH (Q9M9V9), 
TCTP_AEDAE  (Q1HR79), TCTP_AEDAL  (Q5MIP6), TCTP_ANOGA  (Q7QCK2), 
TCTP_BOMMO  (Q75VN3), TCTP_BOVIN  (Q5E984), TCTP_BRABE  (Q95VY2), 
TCTP_BRAOL  (Q944W6), TCTP_BRUMA  (P90697), TCTP_CAEBR  (Q622B7), 
TCTP_CAEEL  (Q93573), TCTP_CANAL  (Q5A860), TCTP_CANGA  (Q6FKB6), 
TCTP_CHICK  (P43347), TCTP_CROAD  (J3SFJ3), TCTP_CROHD  (T1DKS4), 
TCTP_CUCMA  (Q2PS27), TCTP_CUCME  (Q9M5I8), TCTP_DANRE  (Q9DGK4), 
TCTP_DEBHA  (Q6BP09), TCTP_DROME  (Q9VGS2), TCTP_DROPS  (Q293Y0), 
TCTP_DROYA  (Q6XIN1), TCTP_ELAGV  (Q5J907), TCTP_FRAAN  (O03992), 
TCTP_GIBZE  (Q4IJT5), TCTP_GRARO  (M5B4R7), TCTP_HEVBR  (Q9ZSW9), 
TCTP_HORVU  (Q9M5G3), TCTP_HUMAN  (P13693), TCTP_KLULA  (Q6CTH3), 
TCTP_LABRO  (Q98SJ7), TCTP_LATJA  (Q6XSH4), TCTP_LONON  (Q5MGM6), 
TCTP_LOXIN  (G3LU44), TCTP_LUMRU  (O18477), TCTP_MAIZE  (Q8H6A5), 
TCTP_MEDSA  (P28014), TCTP_MICFL  (U3EQ60), TCTP_MOUSE  (P63028), 
TCTP_NEUCR  (Q7RYV5), TCTP_ORYSJ  (P35681), TCTP_PANTR  (A5A6K2), 
TCTP_PEA    (P50906), TCTP_PIG    (P61288), TCTP_PLABA  (Q4YZC6), 
TCTP_PLACH  (Q4XFJ8), TCTP_PLAF7  (Q8I3Z5), TCTP_PLAYO  (Q9XYU2), 
TCTP_PLUXY  (Q60FS1), TCTP_PSEMZ  (Q9ZRX0), TCTP_RABIT  (P43348), 
TCTP_RAT    (P63029), TCTP_SCHJA  (P91800), TCTP_SCHPO  (Q10344), 
TCTP_SCOMX  (Q202I6), TCTP_SOLLC  (Q6DUX3), TCTP_SOLTU  (P43349), 
TCTP_SOYBN  (Q944T2), TCTP_THEAN  (Q4UGL5), TCTP_THEPA  (Q4N938), 
TCTP_TOBAC  (Q9XHL7), TCTP_USTMA  (Q4PF30), TCTP_WHEAT  (Q8LRM8), 
TCTP_WUCBA  (Q962A2), TCTP_XENLA  (Q7ZYF2), TCTP_XENTR  (Q66JC5), 
TCTP_YARLI  (Q6C4G1), TCTP_YEAST  (P35691)
» more

UniProtKB/Swiss-Prot
False negative sequences
14 sequences

TCTP2_DICDI (Q54RX1), TCTP8_HUMAN (Q9HAU6), TCTP_ASPFU  (Q4WRB8), 
TCTP_ASPOR  (Q2UR29), TCTP_CRYNB  (P0CR83), TCTP_CRYNJ  (P0CR82), 
TCTP_EMENI  (Q5BFN9), TCTP_HYDVU  (Q94587), TCTP_IXOSC  (Q4PLZ3), 
TCTP_PLAKN  (P84152), TCTP_SCHHA  (Q8I8A2), TCTP_SCHMA  (Q95WA2), 
TCTP_TRIPS  (Q2L875), TPT1L_HUMAN (Q56UQ5)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

TCTP2_PSEMZ (P85905), TCTP_TRYBB  (P35758)

		
PDB
[Detailed view]
8 PDB

1H6Q; 1H7Y; 1YZ1; 2HR9; 2KWB; 2LOY; 3EBM; 3P3K

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