Entry: PS01005

General information about the entry

Entry name [info] FORMATE_NITRITE_TP_1
Accession [info] PS01005
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); JUL-1998 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00769

Name and characterization of the entry

Description [info] Formate and nitrite transporters signature 1.
Pattern [info]
[LIVMA]-[LIVMY]-x-G-[GSTA]-[DES]-L-[FI]-[TN]-[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 17 in 17 different sequences
Number of true positive hits 13 in 13 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 76.47 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
13 sequences

FDHC_METFO  (P35839), FDHC_METTF  (Q50568), FOCA_ECO57  (P0AC25), 
FOCA_ECOL6  (P0AC24), FOCA_ECOLI  (P0AC23), FOCA_HAEIN  (P43756), 
FOCB_ECOLI  (P77733), NIRC_ECOLI  (P0AC26), NIRC_SALTY  (P25926), 
NIRC_SHIFL  (P0AC27), YHA8_YEAST  (P38750), YRHG_BACSU  (O05399), 
YWCJ_BACSU  (P39608)
» More

UniProtKB/Swiss-Prot
False positive sequences
4 sequences

SEM3E_CHICK (O42237), THADA_CANFA (A8C750), THADA_CHLAE (A8C752), 
THADA_HUMAN (Q6YHU6)
» More

PDB
[Detailed view]
2 PDB

3KCU; 3KCV

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission