Entry: PS01009

General information about the entry
Entry name CRISP_1
Accession number PS01009
Entry type PATTERN
Date JUN-1994 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00772
Name and characterization of the entry
DescriptionCRISP family signature 1.
Pattern [GDER]-[HR]-[FYWH]-[TVS]-[QA]-[LIVM]-[LIVMA]-W-x(2)-[STN].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 117 hits in 117 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 116 hits in 116 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 1 hits in 1 different sequences
  • Number of known missed hits: 18
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 28
  • Precision (true hits / (true hits + false positives)): 99.15 %
  • Recall (true hits / (true hits + false negatives)): 86.57 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ASP_ANCCA   (Q16937), CRIS1_HUMAN (P54107), CRIS1_MACMU (Q9XSD3), 
CRIS1_MOUSE (Q03401), CRIS1_RAT   (P12020), CRIS2_CAVPO (Q60477), 
CRIS2_HUMAN (P16562), CRIS2_MOUSE (P16563), CRIS3_HORSE (O19010), 
CRIS3_HUMAN (P54108), CRIS3_MOUSE (Q03402), CRIS_PROFL  (P0CB15), 
CRVP1_DISTY (Q2XXQ6), CRVP1_ENHPO (Q2XXQ3), CRVP1_LAPHA (Q8UW25), 
CRVP1_NAJAT (Q7T1K6), CRVP1_NAJKA (P84805), CRVP2_DISTY (Q2XXQ5), 
CRVP2_ENHPO (Q2XXQ2), CRVP2_LAPHA (Q8UW11), CRVP2_NAJAT (Q7ZZN8), 
CRVP2_NAJKA (P84808), CRVP3_DISTY (Q2XXQ4), CRVP3_VARAC (Q2XXR2), 
CRVP4_VARAC (Q2XXR1), CRVP5_VARAC (Q2XXR0), CRVP7_VARAC (Q2XXQ8), 
CRVP8_VARAC (Q2XXQ7), CRVPA_VARVA (Q2XXP2), CRVPB_VARVA (Q2XXP1), 
CRVP_AGKPI  (Q7ZTA0), CRVP_AUSSU  (A8S6B6), CRVP_CAURH  (A7X4T8), 
CRVP_CERRY  (D8VNS1), CRVP_CROAT  (Q7ZT99), CRVP_DEMVE  (A6MFK9), 
CRVP_GLOBL  (Q8JI40), CRVP_HELHO  (Q91055), CRVP_HOPST  (Q3SB03), 
CRVP_LEIMD  (Q2XXQ1), CRVP_LIOPO  (Q2XXQ0), CRVP_NOTSC  (Q3SB04), 
CRVP_OPHHA  (Q7ZT98), CRVP_OXYMI  (Q3SB06), CRVP_OXYSC  (Q3SB07), 
CRVP_PHIOL  (Q09GJ9), CRVP_PROFL  (Q8JI39), CRVP_PROJR  (Q7ZZN9), 
CRVP_PROMU  (P79845), CRVP_PSEAU  (Q8AVA4), CRVP_PSEPO  (Q8AVA3), 
CRVP_PSETE  (Q3SB05), CRVP_PSSEM  (Q8JI38), CRVP_RHATT  (Q8JGT9), 
CRVP_SISCA  (B0VXV6), CRVP_TELDH  (Q2XXP5), CRVP_TRIBI  (Q2XXP4), 
CRVP_TRIST  (P60623), CRVP_VIPBE  (B7FDI1), CRVP_VIPNI  (B7FDI0), 
GAPR1_HUMAN (Q9H4G4), GAPR1_MOUSE (Q9CYL5), GLIP1_HUMAN (P48060), 
GLIP1_MOUSE (Q9CWG1), GPRL1_BOVIN (Q32LB5), GPRL1_HUMAN (Q6UWM5), 
LON1_CAEEL  (Q09566), PI16_BOVIN  (Q58D34), PI16_HUMAN  (Q6UXB8), 
PI16_MOUSE  (Q9ET66), PR04_SOLLC  (Q04108), PR06_SOLLC  (P04284), 
PR12_HORVU  (P35792), PR13_HORVU  (P35793), PR1A_SOLLC  (Q08697), 
PR1A_TOBAC  (P08299), PR1B_TOBAC  (P07053), PR1C_TOBAC  (P09042), 
PR1_ARATH   (P33154), PR1_HORVU   (Q05968), PR1_MEDTR   (Q40374), 
PR1_SAMNI   (Q41359), PRB1_TOBAC  (P11670), PRMS_MAIZE  (Q00008), 
PRY1_YEAST  (P47032), PRY2_YEAST  (P36110), PRY3_YEAST  (P47033), 
SC14_SCHCO  (P35795), SC7_SCHCO   (P35794), VA3_SOLIN   (P35778), 
VA3_SOLRI   (P35779), VA51_VESCR  (P35781), VA52_DOLMA  (P10736), 
VA52_VESCR  (P35782), VA53_DOLMA  (P10737), VA5_DOLAR   (Q05108), 
VA5_MICHY   (A9YME1), VA5_PACCH   (C0ITL3), VA5_POLAN   (Q05109), 
VA5_POLDO   (P81656), VA5_POLEX   (P35759), VA5_POLFU   (P35780), 
VA5_POLGA   (P83377), VA5_POLPI   (P86686), VA5_POLSR   (Q7Z156), 
VA5_RHYBR   (B2MVK7), VA5_VESFL   (P35783), VA5_VESGE   (P35784), 
VA5_VESMA   (P81657), VA5_VESMC   (P35760), VA5_VESMG   (P86870), 
VA5_VESPE   (P35785), VA5_VESSQ   (P35786), VA5_VESVI   (P35787), 
VA5_VESVU   (Q05110), VAL5_VESMC  (Q2L6Z1)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
CRLD1_CHICK (Q98ST5), CRLD1_HUMAN (Q9H336), CRLD1_MOUSE (Q8CGD2), 
CRLD2_HUMAN (Q9H0B8), CRLD2_XENTR (Q4V9Y5), CRSPL_HUMAN (Q9H3Y0), 
CRSPL_MOUSE (A2A5I3), CRVP6_VARAC (Q2XXQ9), MR30_CONMR  (A1BQQ5), 
PI15A_DANRE (Q7T141), PI15_CHICK  (Q98ST6), PI15_HUMAN  (O43692), 
PI15_MOUSE  (Q8BS03), PI15_XENLA  (Q3KPV7), ST14_SOLTU  (Q41495), 
TX31_CONTE  (Q7YT83), VA5_LYCSI   (A9QQ26), VA5_TITSE   (P85840)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
CRVP1_AUSSU (P81991), CRVP1_NAJNA (P86543), CRVP1_VARAC (Q2XXR4), 
CRVP2_AUSSU (P81992), CRVP2_VARAC (Q2XXR3), CRVP9_VARVA (Q2XXP3), 
CRVPA_NAJHA (P0DL14), CRVPA_NAJHH (P84807), CRVPA_NOTSC (P0DL19), 
CRVPA_PSECT (P0DL21), CRVPA_PSEGT (P0DL20), CRVPB_NAJHA (P0DL15), 
CRVPN_NAJHH (P84804), CRVPO_NAJKA (P84803), CRVPP_NAJHH (P84806), 
CRVP_ASPSC  (P81990), CRVP_BUNCA  (P81993), CRVP_CRYPP  (P81995), 
CRVP_DABRR  (P86537), CRVP_HELAG  (P0DJG8), CRVP_HEMHA  (P0DL17), 
CRVP_NAJMO  (P0DL16), CRVP_OVOOK  (P0DL18), CRVP_PHIPA  (P85099), 
CRVP_TROCA  (P81994), HYAL_TITST  (P0C8X3), PR1_CUCME   (P83834), 
VA_PHOKE    (P85860)
False positive hits (sequences which do not belong to the set under consideration):
ASA1_PICPG  (C4R970)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1CFE; 1QNX; 1RC9; 1SMB; 1WVR; 1XTA; 1XX5; 2DDA; 2DDB; 2EPF; 2GIZ; 2VZN; 3MZ8; 3Q2R; 3Q2U; 4AIW;

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission


If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)

File name:

Format: Swiss-Prot Fasta

or