Entry: PS01011

General information about the entry
Entry name FOLYLPOLYGLU_SYNT_1
Accession number PS01011
Entry type PATTERN
Date JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00773
Name and characterization of the entry
DescriptionFolylpolyglutamate synthase signature 1.
Pattern [LIVMFY]-x-[LIVM]-[STAG]-G-T-[NK]-G-K-x-[STG]-x(4)-{A}-x-{EAD}-[LIVM](2)- x(3,4)-[GSKQT].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 115 hits in 115 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 29 hits in 29 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 86 hits in 86 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 25.22 %
  • Recall (true hits / (true hits + false negatives)): 93.55 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
FOLC_BACSU  (Q05865), FOLC_BOVIN  (A6H751), FOLC_BUCAI  (P57265), 
FOLC_BUCAP  (Q8K9X3), FOLC_BUCBP  (Q89AT2), FOLC_CAEEL  (Q09509), 
FOLC_CRIGR  (Q924L9), FOLC_DICDI  (Q54CY5), FOLC_ECOLI  (P08192), 
FOLC_HAEIN  (P43775), FOLC_HUMAN  (Q05932), FOLC_LACCA  (P15925), 
FOLC_MOUSE  (P48760), FOLC_YEAST  (P36001), FOLD_YEAST  (Q12676), 
FOLE_CANAX  (Q9Y893), FOLE_NEUCR  (O13492), FOLE_SCHPO  (O74742), 
FOLE_YEAS1  (B3LJR0), FOLE_YEAS6  (B5VSC3), FOLE_YEAS7  (A6ZP80), 
FOLE_YEAS8  (C8ZGZ3), FOLE_YEASA  (E7KIA3), FOLE_YEASB  (E7Q9C7), 
FOLE_YEASL  (E7KUJ4), FOLE_YEASO  (E7NMM0), FOLE_YEAST  (Q08645), 
FOLE_YEASZ  (E7QKX4), FPGS1_ARATH (F4K2A1)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
FPGS2_ARATH (F4J2K2), FPGS3_ARATH (Q8W035)
False positive hits (sequences which do not belong to the set under consideration):
MURD_AGRT5  (Q8UDM6), MURD_ANAMM  (Q5PBH9), MURD_BARHE  (Q6G2Q3), 
MURD_BARQU  (Q6G122), MURD_BORA1  (Q2KVF5), MURD_BORBR  (Q7WFS0), 
MURD_BORPA  (Q7W4B2), MURD_BORPE  (Q7VUQ1), MURD_BRUA2  (Q2YM69), 
MURD_BRUAB  (Q57C76), MURD_BRUME  (Q8YI68), MURD_BRUSU  (Q8FZP2), 
MURD_CORJK  (Q4JW97), MURD_CUPPJ  (Q46WZ2), MURD_ENTFA  (O07108), 
MURD_GLOVI  (Q7NEZ5), MURD_HELPH  (Q1CU35), MURD_HELPJ  (Q9ZLY0), 
MURD_HELPY  (O25236), MURD_LACPL  (Q88V80), MURD_LACS1  (Q1WT99), 
MURD_LEIXX  (Q6AE62), MURD_LISIN  (Q929Y1), MURD_LISMF  (Q71XX7), 
MURD_LISMO  (Q8Y5M1), MURD_MAGSA  (Q2W0H5), MURD_MESSB  (Q11GS3), 
MURD_MOOTA  (Q2RK81), MURD_NITHX  (Q1QNU5), MURD_NITWN  (Q3STT0), 
MURD_PARUW  (Q6MBS4), MURD_POLSJ  (Q12EL7), MURD_PROAC  (Q6A9Q4), 
MURD_PROM9  (Q319C4), MURD_PROMM  (Q7V5V5), MURD_RALME  (Q1LIM4), 
MURD_RHIEC  (Q2K6B9), MURD_RHIL3  (Q1ME31), MURD_RHILO  (Q98KB1), 
MURD_RHIME  (Q52953), MURD_RHOFD  (Q21SW7), MURD_RHOP2  (Q2IYL0), 
MURD_RHOPA  (Q6N409), MURD_RHOPB  (Q216E0), MURD_RICBR  (Q1RI52), 
MURD_RICCN  (Q92I60), MURD_RICFE  (Q4ULT8), MURD_RICPR  (Q9ZDC2), 
MURD_RICTY  (Q68WW9), MURD_SPHAL  (Q1GRX7), MURD_STRAW  (Q82AD8), 
MURD_STRCO  (Q9S2W9), MURD_SYNPX  (Q7U8T1), MURD_SYNS9  (Q3AZI5), 
MURD_SYNSC  (Q3AHP0), MURD_TROW8  (Q83HK0), MURD_TROWT  (Q83GN2), 
MURD_WOLPM  (Q73GT3), MURD_WOLTR  (Q5GSC8), MURD_XANAC  (Q8PII9), 
MURD_XANC5  (Q3BR29), MURD_XANC8  (Q4UWX9), MURD_XANCP  (Q8P775), 
MURD_XANOM  (Q2P5V2), MURD_XANOR  (Q5H2Y1), MURD_XYLFA  (Q9PEB0), 
MURD_XYLFT  (Q87EA7), MURD_ZYMMO  (Q5NPA7), MURE1_CLOAB (Q97H84), 
MURE_AQUAE  (O67631), MURE_BACHD  (Q9K9S4), MURE_CAMJE  (O69290), 
MURE_CHLTE  (Q8KGC9), MURE_CLOPE  (Q8XJ99), MURE_CLOTE  (Q894B7), 
MURE_HELHP  (Q7VF14), MURE_HELPJ  (Q9ZJC6), MURE_HELPY  (O26027), 
MURE_LISIN  (Q929X9), MURE_LISMF  (Q71XX5), MURE_LISMO  (Q8Y5L9), 
MURE_PROMP  (Q7V2Q8), MURE_SHEON  (Q8E9P3), MURE_THEEB  (Q8DJI4), 
MURE_THEMA  (Q9WY79), MURE_WOLSU  (Q7M8F9)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1FGS; 1JBV; 1JBW; 1W78; 1W7K; 2GC5; 2GC6; 2GCA; 2GCB;

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