Entry: PS01011

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General information about the entry

Entry name [info] FOLYLPOLYGLU_SYNT_1
Accession [info] PS01011
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00773

Name and characterization of the entry

Description [info] Folylpolyglutamate synthase signature 1.
Pattern [info]
[LIVMFY]-x-[LIVM]-[STAG]-G-T-[NK]-G-K-x-[STG]-x(4)-{A}-x-{EAD}-[LIVM](2)-
x(3,4)-[GSKQT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 115 in 115 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits
Number of false positive hits 86 in 86 different sequences
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 25.22 %
Recall (true positives / (true positives + false negatives)) 87.88 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
29 sequences

FOLC_BACSU  (Q05865), FOLC_BOVIN  (A6H751), FOLC_BUCAI  (P57265), 
FOLC_BUCAP  (Q8K9X3), FOLC_BUCBP  (Q89AT2), FOLC_CAEEL  (Q09509), 
FOLC_CRIGR  (Q924L9), FOLC_DICDI  (Q54CY5), FOLC_ECOLI  (P08192), 
FOLC_HAEIN  (P43775), FOLC_HUMAN  (Q05932), FOLC_LACCA  (P15925), 
FOLC_MOUSE  (P48760), FOLC_YEAST  (P36001), FOLD_YEAST  (Q12676), 
FOLE_CANAX  (Q9Y893), FOLE_NEUCR  (O13492), FOLE_SCHPO  (O74742), 
FOLE_YEAS1  (B3LJR0), FOLE_YEAS6  (B5VSC3), FOLE_YEAS7  (A6ZP80), 
FOLE_YEAS8  (C8ZGZ3), FOLE_YEASA  (E7KIA3), FOLE_YEASB  (E7Q9C7), 
FOLE_YEASL  (E7KUJ4), FOLE_YEASO  (E7NMM0), FOLE_YEAST  (Q08645), 
FOLE_YEASZ  (E7QKX4), FPGS1_ARATH (F4K2A1)
» More

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

FOLCP_HALSA (Q9HS44), FOLCP_HALVD (D4GW05), FPGS2_ARATH (F4J2K2), 
FPGS3_ARATH (Q8W035)
» More

UniProtKB/Swiss-Prot
False positive sequences
86 sequences

MURD_AGRT5  (Q8UDM6), MURD_ANAMM  (Q5PBH9), MURD_BARHE  (Q6G2Q3), 
MURD_BARQU  (Q6G122), MURD_BORA1  (Q2KVF5), MURD_BORBR  (Q7WFS0), 
MURD_BORPA  (Q7W4B2), MURD_BORPE  (Q7VUQ1), MURD_BRUA2  (Q2YM69), 
MURD_BRUAB  (Q57C76), MURD_BRUME  (Q8YI68), MURD_BRUSU  (Q8FZP2), 
MURD_CHESB  (Q11GS3), MURD_CORJK  (Q4JW97), MURD_CUPPJ  (Q46WZ2), 
MURD_ENTFA  (O07108), MURD_GLOVI  (Q7NEZ5), MURD_HELPH  (Q1CU35), 
MURD_HELPJ  (Q9ZLY0), MURD_HELPY  (O25236), MURD_LACPL  (Q88V80), 
MURD_LACS1  (Q1WT99), MURD_LEIXX  (Q6AE62), MURD_LISIN  (Q929Y1), 
MURD_LISMF  (Q71XX7), MURD_LISMO  (Q8Y5M1), MURD_MAGSA  (Q2W0H5), 
MURD_MOOTA  (Q2RK81), MURD_NITHX  (Q1QNU5), MURD_NITWN  (Q3STT0), 
MURD_PARUW  (Q6MBS4), MURD_POLSJ  (Q12EL7), MURD_PROAC  (Q6A9Q4), 
MURD_PROM9  (Q319C4), MURD_PROMM  (Q7V5V5), MURD_RALME  (Q1LIM4), 
MURD_RHIEC  (Q2K6B9), MURD_RHIL3  (Q1ME31), MURD_RHILO  (Q98KB1), 
MURD_RHIME  (Q52953), MURD_RHOFT  (Q21SW7), MURD_RHOP2  (Q2IYL0), 
MURD_RHOPA  (Q6N409), MURD_RHOPB  (Q216E0), MURD_RICBR  (Q1RI52), 
MURD_RICCN  (Q92I60), MURD_RICFE  (Q4ULT8), MURD_RICPR  (Q9ZDC2), 
MURD_RICTY  (Q68WW9), MURD_SPHAL  (Q1GRX7), MURD_STRAW  (Q82AD8), 
MURD_STRCO  (Q9S2W9), MURD_SYNPX  (Q7U8T1), MURD_SYNS9  (Q3AZI5), 
MURD_SYNSC  (Q3AHP0), MURD_TROW8  (Q83HK0), MURD_TROWT  (Q83GN2), 
MURD_WOLPM  (Q73GT3), MURD_WOLTR  (Q5GSC8), MURD_XANAC  (Q8PII9), 
MURD_XANC5  (Q3BR29), MURD_XANC8  (Q4UWX9), MURD_XANCP  (Q8P775), 
MURD_XANOM  (Q2P5V2), MURD_XANOR  (Q5H2Y1), MURD_XYLFA  (Q9PEB0), 
MURD_XYLFT  (Q87EA7), MURD_ZYMMO  (Q5NPA7), MURE1_CLOAB (Q97H84), 
MURE_AQUAE  (O67631), MURE_BACHD  (Q9K9S4), MURE_CAMJE  (O69290), 
MURE_CHLTE  (Q8KGC9), MURE_CLOPE  (Q8XJ99), MURE_CLOTE  (Q894B7), 
MURE_HELHP  (Q7VF14), MURE_HELPJ  (Q9ZJC6), MURE_HELPY  (O26027), 
MURE_LISIN  (Q929X9), MURE_LISMF  (Q71XX5), MURE_LISMO  (Q8Y5L9), 
MURE_PROMP  (Q7V2Q8), MURE_SHEON  (Q8E9P3), MURE_THEEB  (Q8DJI4), 
MURE_THEMA  (Q9WY79), MURE_WOLSU  (Q7M8F9)
» More

PDB
[Detailed view]
9 PDB

1FGS; 1JBV; 1JBW; 1W78; 1W7K; 2GC5; 2GC6; 2GCA; 2GCB

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