To improve security and privacy, we are moving our web pages and services from HTTP to HTTPS.
To give users of web services time to transition to HTTPS, we will support separate HTTP and HTTPS services until the end of 2017.
From January 2018 most HTTP traffic will be automatically redirected to HTTPS. [more...]
View this page in https
Entry: PS01022

General information about the entry

Entry name [info] PTR2_1
Accession [info] PS01022
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED; 01-NOV-1997 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00784

Name and characterization of the entry

Description [info] PTR2 family proton/oligopeptide symporters signature 1.
Pattern [info]
[GA]-[GAS]-[LIVMFYWA]-[LIVM]-[GAS]-D-x-[LIVMFYWT]-[LIVMFYW]-G-x(3)-[TAV]-
[IV]-x(3)-[GSTAV]-x-[LIVMF]-x(3)-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 76 in 76 different sequences
Number of true positive hits 76 in 76 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 39
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 66.09 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
76 sequences

DTPA_CHRVO  (Q7NRM5    ), DTPA_CITK8  (A8AH15    ), DTPA_CROTZ  (C9Y3M8    ), 
DTPA_ECO57  (Q8X651    ), DTPA_ECOL6  (Q8FH91    ), DTPA_ECOLI  (P77304    ), 
DTPA_EDWTE  (D0Z7W2    ), DTPA_ENT38  (A4W9W3    ), DTPA_ERWP6  (D2TBH1    ), 
DTPA_KLEP3  (B5XWP3    ), DTPA_PECCP  (C6DH09    ), DTPA_PROMH  (B4EY98    ), 
DTPA_SALTI  (Q8Z6Q5    ), DTPA_SALTY  (Q8ZPM6    ), DTPA_SERP5  (A8GDZ4    ), 
DTPB_ECOLI  (P36837    ), DTPB_PHOAA  (B6VMU9    ), DTPB_PHOLU  (Q8GFA2    ), 
DTPB_SHIDS  (Q32AW5    ), DTPB_XENBS  (D3V3D1    ), DTPC_ECOLI  (P39276    ), 
DTPD_CITK8  (A8AJB3    ), DTPD_CITRI  (D2TNL4    ), DTPD_ECO57  (Q8X9D3    ), 
DTPD_ECOLI  (P75742    ), DTPD_KLEP3  (B5XZE5    ), DTPD_KLEP7  (A6T6E2    ), 
DTPD_SALCH  (Q57RM6    ), DTPD_SALPC  (C0PWD2    ), DTPD_SALT1  (D0ZQC5    ), 
DTPD_SALTY  (Q7CQY0    ), DTPD_SHIFL  (Q83S84    ), DTPT_LACHE  (O07380    ), 
DTPT_LACLA  (P0C2U2    ), DTPT_LACLC  (P0C2U3    ), DTPT_LACLM  (A2RMA8    ), 
PEPT1_CAEEL (Q21219    ), PEPT1_DROME (P91679    ), PEPT2_CAEEL (Q17758    ), 
PEPT3_CAEEL (O01840    ), PTR10_ARATH (Q9SK96    ), PTR11_ARATH (Q9SK99    ), 
PTR13_ARATH (Q9LFX9    ), PTR16_ARATH (Q93VV5    ), PTR17_ARATH (Q93Z20    ), 
PTR1_ARATH  (Q9M390    ), PTR22_ARATH (Q8VZE2    ), PTR23_ARATH (Q0WSZ6    ), 
PTR24_ARATH (Q8RX67    ), PTR26_ARATH (Q84WG0    ), PTR27_ARATH (Q9SZY4    ), 
PTR28_ARATH (P0CI03    ), PTR2_ARATH  (P46032    ), PTR2_CANAX  (P46030    ), 
PTR2_SCHPO  (Q9P380    ), PTR2_YEAST  (P32901    ), PTR39_ARATH (Q9M175    ), 
PTR40_ARATH (Q9M174    ), PTR41_ARATH (Q9M173    ), PTR42_ARATH (Q9M172    ), 
PTR45_ARATH (Q9M331    ), PTR46_ARATH (Q9M1I2    ), PTR49_ARATH (Q9LYR6    ), 
PTR5_ARATH  (Q9LFB8    ), PTR7_ARATH  (Q05085    ), PTR9_ARATH  (Q0WP01    ), 
S15A1_CANLF (Q8WMX5    ), S15A1_HUMAN (P46059    ), S15A1_MOUSE (Q9JIP7    ), 
S15A1_RABIT (P36836    ), S15A1_RAT   (P51574    ), S15A2_HUMAN (Q16348    ), 
S15A2_MOUSE (Q9ES07    ), S15A2_RABIT (P46029    ), S15A2_RAT   (Q63424    ), 
YCLF_BACSU  (P94408    )
» more

UniProtKB/Swiss-Prot
False negative sequences
39 sequences

DTPA_YERPE  (Q0WEG0    ), DTPB_AERHH  (A0KMY1    ), DTPB_EDWTE  (D0ZGL2    ), 
DTPB_SALTY  (Q8ZLD6    ), DTPB_VIBFM  (B5FDK5    ), DTPB_YERE8  (A1JRI8    ), 
PTR12_ARATH (Q8VYE4    ), PTR14_ARATH (Q9LQL2    ), PTR15_ARATH (Q56XQ6    ), 
PTR18_ARATH (Q9SX20    ), PTR19_ARATH (Q8H157    ), PTR20_ARATH (Q9CAR9    ), 
PTR21_ARATH (Q8RX77    ), PTR25_ARATH (Q9C7U1    ), PTR29_ARATH (O80436    ), 
PTR30_ARATH (Q8VZR7    ), PTR31_ARATH (Q9SRI2    ), PTR32_ARATH (Q8LPL2    ), 
PTR33_ARATH (Q9LVE0    ), PTR34_ARATH (Q9LSF0    ), PTR35_ARATH (Q9LSE8    ), 
PTR36_ARATH (Q3EAQ5    ), PTR37_ARATH (Q9M1E2    ), PTR38_ARATH (Q9M1E1    ), 
PTR3_ARATH  (Q9FNL7    ), PTR43_ARATH (Q9M171    ), PTR44_ARATH (Q944G5    ), 
PTR47_ARATH (Q8GXN2    ), PTR48_ARATH (Q9LYD5    ), PTR4_ARATH  (Q9FNL8    ), 
PTR50_ARATH (Q9LFR1    ), PTR51_ARATH (Q3E9B5    ), PTR52_ARATH (Q3E8X3    ), 
PTR53_ARATH (Q9LV10    ), PTR54_ARATH (Q9FM20    ), PTR6_ARATH  (Q9M817    ), 
S15A3_HUMAN (Q8IY34    ), S15A3_MOUSE (Q8BPX9    ), S15A3_RAT   (Q924V4    )
» more

PDB
[Detailed view]
4 PDB

4OH3; 4Q65; 5A2N; 5A2O

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission