Entry: PS01022

General information about the entry

Entry name [info] PTR2_1
Accession [info] PS01022
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1997 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00784

Name and characterization of the entry

Description [info] PTR2 family proton/oligopeptide symporters signature 1.
Pattern [info]
[GA]-[GAS]-[LIVMFYWA]-[LIVM]-[GAS]-D-x-[LIVMFYWT]-[LIVMFYW]-G-x(3)-[TAV]-
[IV]-x(3)-[GSTAV]-x-[LIVMF]-x(3)-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 76 in 76 different sequences
Number of true positive hits 76 in 76 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 39
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 66.09 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
76 sequences

DTPA_CHRVO  (Q7NRM5    ), DTPA_CITK8  (A8AH15    ), DTPA_CROTZ  (C9Y3M8    ), 
DTPA_ECO57  (Q8X651    ), DTPA_ECOL6  (Q8FH91    ), DTPA_ECOLI  (P77304    ), 
DTPA_EDWTE  (D0Z7W2    ), DTPA_ENT38  (A4W9W3    ), DTPA_ERWP6  (D2TBH1    ), 
DTPA_KLEP3  (B5XWP3    ), DTPA_PECCP  (C6DH09    ), DTPA_PROMH  (B4EY98    ), 
DTPA_SALTI  (Q8Z6Q5    ), DTPA_SALTY  (Q8ZPM6    ), DTPA_SERP5  (A8GDZ4    ), 
DTPB_ECOLI  (P36837    ), DTPB_PHOAA  (B6VMU9    ), DTPB_PHOLU  (Q8GFA2    ), 
DTPB_SHIDS  (Q32AW5    ), DTPB_XENBS  (D3V3D1    ), DTPC_ECOLI  (P39276    ), 
DTPD_CITK8  (A8AJB3    ), DTPD_CITRI  (D2TNL4    ), DTPD_ECO57  (Q8X9D3    ), 
DTPD_ECOLI  (P75742    ), DTPD_KLEP3  (B5XZE5    ), DTPD_KLEP7  (A6T6E2    ), 
DTPD_SALCH  (Q57RM6    ), DTPD_SALPC  (C0PWD2    ), DTPD_SALT1  (D0ZQC5    ), 
DTPD_SALTY  (Q7CQY0    ), DTPD_SHIFL  (Q83S84    ), DTPT_LACHE  (O07380    ), 
DTPT_LACLA  (P0C2U2    ), DTPT_LACLC  (P0C2U3    ), DTPT_LACLM  (A2RMA8    ), 
PEPT1_CAEEL (Q21219    ), PEPT1_DROME (P91679    ), PEPT2_CAEEL (Q17758    ), 
PEPT3_CAEEL (O01840    ), PTR10_ARATH (Q9SK96    ), PTR11_ARATH (Q9SK99    ), 
PTR13_ARATH (Q9LFX9    ), PTR16_ARATH (Q93VV5    ), PTR17_ARATH (Q93Z20    ), 
PTR1_ARATH  (Q9M390    ), PTR22_ARATH (Q8VZE2    ), PTR23_ARATH (Q0WSZ6    ), 
PTR24_ARATH (Q8RX67    ), PTR26_ARATH (Q84WG0    ), PTR27_ARATH (Q9SZY4    ), 
PTR28_ARATH (P0CI03    ), PTR2_ARATH  (P46032    ), PTR2_CANAX  (P46030    ), 
PTR2_SCHPO  (Q9P380    ), PTR2_YEAST  (P32901    ), PTR39_ARATH (Q9M175    ), 
PTR40_ARATH (Q9M174    ), PTR41_ARATH (Q9M173    ), PTR42_ARATH (Q9M172    ), 
PTR45_ARATH (Q9M331    ), PTR46_ARATH (Q9M1I2    ), PTR49_ARATH (Q9LYR6    ), 
PTR5_ARATH  (Q9LFB8    ), PTR7_ARATH  (Q05085    ), PTR9_ARATH  (Q0WP01    ), 
S15A1_CANLF (Q8WMX5    ), S15A1_HUMAN (P46059    ), S15A1_MOUSE (Q9JIP7    ), 
S15A1_RABIT (P36836    ), S15A1_RAT   (P51574    ), S15A2_HUMAN (Q16348    ), 
S15A2_MOUSE (Q9ES07    ), S15A2_RABIT (P46029    ), S15A2_RAT   (Q63424    ), 
YCLF_BACSU  (P94408    )
» more

UniProtKB/Swiss-Prot
False negative sequences
39 sequences

DTPA_YERPE  (Q0WEG0    ), DTPB_AERHH  (A0KMY1    ), DTPB_EDWTE  (D0ZGL2    ), 
DTPB_SALTY  (Q8ZLD6    ), DTPB_VIBFM  (B5FDK5    ), DTPB_YERE8  (A1JRI8    ), 
PTR12_ARATH (Q8VYE4    ), PTR14_ARATH (Q9LQL2    ), PTR15_ARATH (Q56XQ6    ), 
PTR18_ARATH (Q9SX20    ), PTR19_ARATH (Q8H157    ), PTR20_ARATH (Q9CAR9    ), 
PTR21_ARATH (Q8RX77    ), PTR25_ARATH (Q9C7U1    ), PTR29_ARATH (O80436    ), 
PTR30_ARATH (Q8VZR7    ), PTR31_ARATH (Q9SRI2    ), PTR32_ARATH (Q8LPL2    ), 
PTR33_ARATH (Q9LVE0    ), PTR34_ARATH (Q9LSF0    ), PTR35_ARATH (Q9LSE8    ), 
PTR36_ARATH (Q3EAQ5    ), PTR37_ARATH (Q9M1E2    ), PTR38_ARATH (Q9M1E1    ), 
PTR3_ARATH  (Q9FNL7    ), PTR43_ARATH (Q9M171    ), PTR44_ARATH (Q944G5    ), 
PTR47_ARATH (Q8GXN2    ), PTR48_ARATH (Q9LYD5    ), PTR4_ARATH  (Q9FNL8    ), 
PTR50_ARATH (Q9LFR1    ), PTR51_ARATH (Q3E9B5    ), PTR52_ARATH (Q3E8X3    ), 
PTR53_ARATH (Q9LV10    ), PTR54_ARATH (Q9FM20    ), PTR6_ARATH  (Q9M817    ), 
S15A3_HUMAN (Q8IY34    ), S15A3_MOUSE (Q8BPX9    ), S15A3_RAT   (Q924V4    )
» more

PDB
[Detailed view]
4 PDB

4OH3; 4Q65; 5A2N; 5A2O

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission