PROSITE logo

PROSITE entry PS01023


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] PTR2_2
Accession [info] PS01023
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00784

Name and characterization of the entry

Description [info] PTR2 family proton/oligopeptide symporters signature 2.
Pattern [info] 
[FYT]-x(2)-[LMFY]-[FYV]-[LIVMFYWA]-x-[IVG]-N-[LIVMAG]-G-[GSA]-[LIMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 80 in 80 different sequences
Number of true positive hits 77 in 77 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 49
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.25 %
Recall (true positives / (true positives + false negatives)) 61.11 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 77 sequences 

DTPA_CHRVO  (Q7NRM5), DTPA_CITK8  (A8AH15), DTPA_CROTZ  (C9Y3M8), 

DTPA_ECO57  (Q8X651), DTPA_ECOL6  (Q8FH91), DTPA_ECOLI  (P77304), 
DTPA_EDWTE  (D0Z7W2), DTPA_ENT38  (A4W9W3), DTPA_ERWP6  (D2TBH1), 
DTPA_KLEP3  (B5XWP3), DTPA_PECCP  (C6DH09), DTPA_PROMH  (B4EY98), 
DTPA_SALTI  (Q8Z6Q5), DTPA_SALTY  (Q8ZPM6), DTPA_SERP5  (A8GDZ4), 
DTPA_YERPE  (Q0WEG0), DTPB_AERHH  (A0KMY1), DTPB_ALIFM  (B5FDK5), 
DTPB_ECOLI  (P36837), DTPB_EDWTE  (D0ZGL2), DTPB_PHOAA  (B6VMU9), 
DTPB_PHOLU  (Q8GFA2), DTPB_SALTY  (Q8ZLD6), DTPB_SHIDS  (Q32AW5), 
DTPB_XENBS  (D3V3D1), DTPB_YERE8  (A1JRI8), DTPC_ECOLI  (P39276), 
DTPD_CITK8  (A8AJB3), DTPD_CITRI  (D2TNL4), DTPD_ECO57  (Q8X9D3), 
DTPD_ECOLI  (P75742), DTPD_KLEP3  (B5XZE5), DTPD_KLEP7  (A6T6E2), 
DTPD_SALCH  (Q57RM6), DTPD_SALPC  (C0PWD2), DTPD_SALT1  (D0ZQC5), 
DTPD_SALTY  (Q7CQY0), DTPD_SHIFL  (Q83S84), DTPT_LACHE  (O07380), 
DTPT_LACLA  (P0C2U2), DTPT_LACLC  (P0C2U3), DTPT_LACLM  (A2RMA8), 
IMQJ_ASPFN  (B8NI27), PEPT1_CAEEL (Q21219), PEPT1_DROME (P91679), 
PEPT2_CAEEL (Q17758), PEPT3_CAEEL (O01840), PEPT_YERP4  (A0A2R9TD79), 
PTR17_ARATH (Q93Z20), PTR1_ARATH  (Q9M390), PTR26_ARATH (Q84WG0), 
PTR2_ARATH  (P46032), PTR2_CANAX  (P46030), PTR2_SCHPO  (Q9P380), 
PTR2_YEAST  (P32901), PTR5_ARATH  (Q9LFB8), PTR7_ARATH  (Q05085), 
PTRA_CANAR  (A0A2H0ZJA8), PTRB_CANAR  (A0A2H0ZNJ6), PTRC_CANAR  (A0A2H0ZCS5), 
S15A1_CANLF (Q8WMX5), S15A1_HUMAN (P46059), S15A1_MOUSE (Q9JIP7), 
S15A1_RABIT (P36836), S15A1_RAT   (P51574), S15A2_HUMAN (Q16348), 
S15A2_MOUSE (Q9ES07), S15A2_RABIT (P46029), S15A2_RAT   (Q63424), 
S15A3_MOUSE (Q8BPX9), S15A3_RAT   (Q924V4), S15A4_BOVIN (A6QQL0), 
S15A4_HUMAN (Q8N697), S15A4_MOUSE (Q91W98), S15A4_RAT   (O09014), 
S15A4_XENLA (Q68F72), YCLF_BACSU  (P94408)
» more

UniProtKB/Swiss-Prot
False negative sequences		 49 sequences 

PTR10_ARATH (Q9SK96), PTR11_ARATH (Q9SK99), PTR12_ARATH (Q8VYE4), 

PTR13_ARATH (Q9LFX9), PTR14_ARATH (Q9LQL2), PTR15_ARATH (Q56XQ6), 
PTR16_ARATH (Q93VV5), PTR18_ARATH (Q9SX20), PTR19_ARATH (Q8H157), 
PTR20_ARATH (Q9CAR9), PTR21_ARATH (Q8RX77), PTR22_ARATH (Q8VZE2), 
PTR23_ARATH (Q0WSZ6), PTR24_ARATH (Q8RX67), PTR25_ARATH (Q9C7U1), 
PTR27_ARATH (Q9SZY4), PTR28_ARATH (P0CI03), PTR29_ARATH (O80436), 
PTR30_ARATH (Q8VZR7), PTR31_ARATH (Q9SRI2), PTR32_ARATH (Q8LPL2), 
PTR33_ARATH (Q9LVE0), PTR34_ARATH (Q9LSF0), PTR35_ARATH (Q9LSE8), 
PTR36_ARATH (Q3EAQ5), PTR37_ARATH (Q9M1E2), PTR38_ARATH (Q9M1E1), 
PTR39_ARATH (Q9M175), PTR3_ARATH  (Q9FNL7), PTR40_ARATH (Q9M174), 
PTR41_ARATH (Q9M173), PTR42_ARATH (Q9M172), PTR43_ARATH (Q9M171), 
PTR44_ARATH (Q944G5), PTR45_ARATH (Q9M331), PTR46_ARATH (Q9M1I2), 
PTR47_ARATH (Q8GXN2), PTR48_ARATH (Q9LYD5), PTR49_ARATH (Q9LYR6), 
PTR4_ARATH  (Q9FNL8), PTR50_ARATH (Q9LFR1), PTR51_ARATH (Q3E9B5), 
PTR52_ARATH (Q3E8X3), PTR53_ARATH (Q9LV10), PTR54_ARATH (Q9FM20), 
PTR6_ARATH  (Q9M817), PTR8_ARATH  (Q9M9V7), PTR9_ARATH  (Q0WP01), 
S15A3_HUMAN (Q8IY34)
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

NUON2_STRGG (B1W4V1), NUON_MOOTA  (Q2RJT7), PURL_THEMA  (Q9X0X3)


				
	

	

		PDB
[Detailed view]		
		
			42 PDB
			


			4OH3; 4Q65; 4W6V; 5A2N; 5A2O; 6GS1; 6GS4; 6GS7; 7NQK; 7PMW; 7PMX; 7PMY; 
			
				7PN1; 7Q0L; 7Q0M; 7ZC2; 8B17; 8B18; 8B19; 8B1A; 8B1B; 8B1C; 8B1D; 8B1E; 
				8B1F; 8B1G; 8B1H; 8B1I; 8B1J; 8B1K; 8JZR; 8JZS; 8JZU; 8JZX; 8P6A; 8QSK; 
				8QSL; 8QSM; 8QSN; 8WX3; 8WX4; 8WX5
			
			

			» more