Entry: PS01023

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General information about the entry

Entry name [info] PTR2_2
Accession [info] PS01023
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1997 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00784

Name and characterization of the entry

Description [info] PTR2 family proton/oligopeptide symporters signature 2.
Pattern [info]
[FYT]-x(2)-[LMFY]-[FYV]-[LIVMFYWA]-x-[IVG]-N-[LIVMAG]-G-[GSA]-[LIMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 75 in 75 different sequences
Number of true positive hits 72 in 72 different sequences
Number of 'unknown' hits
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 49
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.00 %
Recall (true positives / (true positives + false negatives)) 59.50 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
72 sequences

DTPA_CHRVO  (Q7NRM5), DTPA_CITK8  (A8AH15), DTPA_CROTZ  (C9Y3M8), 
DTPA_ECO57  (Q8X651), DTPA_ECOL6  (Q8FH91), DTPA_ECOLI  (P77304), 
DTPA_EDWTE  (D0Z7W2), DTPA_ENT38  (A4W9W3), DTPA_ERWP6  (D2TBH1), 
DTPA_KLEP3  (B5XWP3), DTPA_PECCP  (C6DH09), DTPA_PROMH  (B4EY98), 
DTPA_SALTI  (Q8Z6Q5), DTPA_SALTY  (Q8ZPM6), DTPA_SERP5  (A8GDZ4), 
DTPA_YERPE  (Q0WEG0), DTPB_AERHH  (A0KMY1), DTPB_ECOLI  (P36837), 
DTPB_EDWTE  (D0ZGL2), DTPB_PHOAA  (B6VMU9), DTPB_PHOLU  (Q8GFA2), 
DTPB_SALTY  (Q8ZLD6), DTPB_SHIDS  (Q32AW5), DTPB_VIBFM  (B5FDK5), 
DTPB_XENBS  (D3V3D1), DTPB_YERE8  (A1JRI8), DTPD_CITK8  (A8AJB3), 
DTPD_CITRI  (D2TNL4), DTPD_ECO57  (Q8X9D3), DTPD_ECOLI  (P75742), 
DTPD_KLEP3  (B5XZE5), DTPD_KLEP7  (A6T6E2), DTPD_SALCH  (Q57RM6), 
DTPD_SALPC  (C0PWD2), DTPD_SALT1  (D0ZQC5), DTPD_SALTY  (Q7CQY0), 
DTPD_SHIFL  (Q83S84), DTPT_LACHE  (O07380), DTPT_LACLA  (P0C2U2), 
DTPT_LACLC  (P0C2U3), DTPT_LACLM  (A2RMA8), PEPT1_CAEEL (Q21219), 
PEPT1_DROME (P91679), PEPT2_CAEEL (Q17758), PEPT3_CAEEL (O01840), 
PTR17_ARATH (Q93Z20), PTR1_ARATH  (Q9M390), PTR26_ARATH (Q84WG0), 
PTR2_ARATH  (P46032), PTR2_CANAX  (P46030), PTR2_SCHPO  (Q9P380), 
PTR2_YEAST  (P32901), PTR5_ARATH  (Q9LFB8), PTR7_ARATH  (Q05085), 
S15A1_CANFA (Q8WMX5), S15A1_HUMAN (P46059), S15A1_MOUSE (Q9JIP7), 
S15A1_RABIT (P36836), S15A1_RAT   (P51574), S15A2_HUMAN (Q16348), 
S15A2_MOUSE (Q9ES07), S15A2_RABIT (P46029), S15A2_RAT   (Q63424), 
S15A3_MOUSE (Q8BPX9), S15A3_RAT   (Q924V4), S15A4_BOVIN (A6QQL0), 
S15A4_HUMAN (Q8N697), S15A4_MOUSE (Q91W98), S15A4_RAT   (O09014), 
S15A4_XENLA (Q68F72), YCLF_BACSU  (P94408), YJDL_ECOLI  (P39276)
» More

UniProtKB/Swiss-Prot
False negative sequences
49 sequences

PTR10_ARATH (Q9SK96), PTR11_ARATH (Q9SK99), PTR12_ARATH (Q8VYE4), 
PTR13_ARATH (Q9LFX9), PTR14_ARATH (Q9LQL2), PTR15_ARATH (Q56XQ6), 
PTR16_ARATH (Q93VV5), PTR18_ARATH (Q9SX20), PTR19_ARATH (Q8H157), 
PTR20_ARATH (Q9CAR9), PTR21_ARATH (Q8RX77), PTR22_ARATH (Q8VZE2), 
PTR23_ARATH (Q0WSZ6), PTR24_ARATH (Q8RX67), PTR25_ARATH (Q9C7U1), 
PTR27_ARATH (Q9SZY4), PTR28_ARATH (P0CI03), PTR29_ARATH (O80436), 
PTR30_ARATH (Q8VZR7), PTR31_ARATH (Q9SRI2), PTR32_ARATH (Q8LPL2), 
PTR33_ARATH (Q9LVE0), PTR34_ARATH (Q9LSF0), PTR35_ARATH (Q9LSE8), 
PTR36_ARATH (Q3EAQ5), PTR37_ARATH (Q9M1E2), PTR38_ARATH (Q9M1E1), 
PTR39_ARATH (Q9M175), PTR3_ARATH  (Q9FNL7), PTR40_ARATH (Q9M174), 
PTR41_ARATH (Q9M173), PTR42_ARATH (Q9M172), PTR43_ARATH (Q9M171), 
PTR44_ARATH (Q944G5), PTR45_ARATH (Q9M331), PTR46_ARATH (Q9M1I2), 
PTR47_ARATH (Q8GXN2), PTR48_ARATH (Q9LYD5), PTR49_ARATH (Q9LYR6), 
PTR4_ARATH  (Q9FNL8), PTR50_ARATH (Q9LFR1), PTR51_ARATH (Q3E9B5), 
PTR52_ARATH (Q3E8X3), PTR53_ARATH (Q9LV10), PTR54_ARATH (Q9FM20), 
PTR6_ARATH  (Q9M817), PTR8_ARATH  (Q9M9V7), PTR9_ARATH  (Q0WP01), 
S15A3_HUMAN (Q8IY34)
» More

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

NUON2_STRGG (B1W4V1), NUON_MOOTA  (Q2RJT7), PURL_THEMA  (Q9X0X3)

		
PDB
[Detailed view]
3 PDB

4CL4; 4CL5; 4OH3

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