Entry: PS01023

General information about the entry

Entry name [info] PTR2_2
Accession [info] PS01023
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1997 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00784

Name and characterization of the entry

Description [info] PTR2 family proton/oligopeptide symporters signature 2.
Pattern [info]
[FYT]-x(2)-[LMFY]-[FYV]-[LIVMFYWA]-x-[IVG]-N-[LIVMAG]-G-[GSA]-[LIMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 75 in 75 different sequences
Number of true positive hits 72 in 72 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 49
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.00 %
Recall (true positives / (true positives + false negatives)) 59.50 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
72 sequences

DTPA_CHRVO  (Q7NRM5), DTPA_CITK8  (A8AH15), DTPA_ECO57  (Q8X651), 
DTPA_ECOL6  (Q8FH91), DTPA_ECOLI  (P77304), DTPA_EDWTE  (D0Z7W2), 
DTPA_ENT38  (A4W9W3), DTPA_ERWP6  (D2TBH1), DTPA_KLEP3  (B5XWP3), 
DTPA_PECCP  (C6DH09), DTPA_PROMH  (B4EY98), DTPA_SALTI  (Q8Z6Q5), 
DTPA_SALTY  (Q8ZPM6), DTPA_SERP5  (A8GDZ4), DTPA_SICTZ  (C9Y3M8), 
DTPA_YERPE  (Q0WEG0), DTPB_AERHH  (A0KMY1), DTPB_ECOLI  (P36837), 
DTPB_EDWTE  (D0ZGL2), DTPB_PHOAA  (B6VMU9), DTPB_PHOLU  (Q8GFA2), 
DTPB_SALTY  (Q8ZLD6), DTPB_SHIDS  (Q32AW5), DTPB_VIBFM  (B5FDK5), 
DTPB_XENBS  (D3V3D1), DTPB_YERE8  (A1JRI8), DTPC_ECOLI  (P39276), 
DTPD_CITK8  (A8AJB3), DTPD_CITRI  (D2TNL4), DTPD_ECO57  (Q8X9D3), 
DTPD_ECOLI  (P75742), DTPD_KLEP3  (B5XZE5), DTPD_KLEP7  (A6T6E2), 
DTPD_SALCH  (Q57RM6), DTPD_SALPC  (C0PWD2), DTPD_SALT1  (D0ZQC5), 
DTPD_SALTY  (Q7CQY0), DTPD_SHIFL  (Q83S84), DTPT_LACHE  (O07380), 
DTPT_LACLA  (P0C2U2), DTPT_LACLC  (P0C2U3), DTPT_LACLM  (A2RMA8), 
PEPT1_CAEEL (Q21219), PEPT1_DROME (P91679), PEPT2_CAEEL (Q17758), 
PEPT3_CAEEL (O01840), PTR17_ARATH (Q93Z20), PTR1_ARATH  (Q9M390), 
PTR26_ARATH (Q84WG0), PTR2_ARATH  (P46032), PTR2_CANAX  (P46030), 
PTR2_SCHPO  (Q9P380), PTR2_YEAST  (P32901), PTR5_ARATH  (Q9LFB8), 
PTR7_ARATH  (Q05085), S15A1_CANFA (Q8WMX5), S15A1_HUMAN (P46059), 
S15A1_MOUSE (Q9JIP7), S15A1_RABIT (P36836), S15A1_RAT   (P51574), 
S15A2_HUMAN (Q16348), S15A2_MOUSE (Q9ES07), S15A2_RABIT (P46029), 
S15A2_RAT   (Q63424), S15A3_MOUSE (Q8BPX9), S15A3_RAT   (Q924V4), 
S15A4_BOVIN (A6QQL0), S15A4_HUMAN (Q8N697), S15A4_MOUSE (Q91W98), 
S15A4_RAT   (O09014), S15A4_XENLA (Q68F72), YCLF_BACSU  (P94408)
» More

UniProtKB/Swiss-Prot
False negative sequences
49 sequences

PTR10_ARATH (Q9SK96), PTR11_ARATH (Q9SK99), PTR12_ARATH (Q8VYE4), 
PTR13_ARATH (Q9LFX9), PTR14_ARATH (Q9LQL2), PTR15_ARATH (Q56XQ6), 
PTR16_ARATH (Q93VV5), PTR18_ARATH (Q9SX20), PTR19_ARATH (Q8H157), 
PTR20_ARATH (Q9CAR9), PTR21_ARATH (Q8RX77), PTR22_ARATH (Q8VZE2), 
PTR23_ARATH (Q0WSZ6), PTR24_ARATH (Q8RX67), PTR25_ARATH (Q9C7U1), 
PTR27_ARATH (Q9SZY4), PTR28_ARATH (P0CI03), PTR29_ARATH (O80436), 
PTR30_ARATH (Q8VZR7), PTR31_ARATH (Q9SRI2), PTR32_ARATH (Q8LPL2), 
PTR33_ARATH (Q9LVE0), PTR34_ARATH (Q9LSF0), PTR35_ARATH (Q9LSE8), 
PTR36_ARATH (Q3EAQ5), PTR37_ARATH (Q9M1E2), PTR38_ARATH (Q9M1E1), 
PTR39_ARATH (Q9M175), PTR3_ARATH  (Q9FNL7), PTR40_ARATH (Q9M174), 
PTR41_ARATH (Q9M173), PTR42_ARATH (Q9M172), PTR43_ARATH (Q9M171), 
PTR44_ARATH (Q944G5), PTR45_ARATH (Q9M331), PTR46_ARATH (Q9M1I2), 
PTR47_ARATH (Q8GXN2), PTR48_ARATH (Q9LYD5), PTR49_ARATH (Q9LYR6), 
PTR4_ARATH  (Q9FNL8), PTR50_ARATH (Q9LFR1), PTR51_ARATH (Q3E9B5), 
PTR52_ARATH (Q3E8X3), PTR53_ARATH (Q9LV10), PTR54_ARATH (Q9FM20), 
PTR6_ARATH  (Q9M817), PTR8_ARATH  (Q9M9V7), PTR9_ARATH  (Q0WP01), 
S15A3_HUMAN (Q8IY34)
» More

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

NUON2_STRGG (B1W4V1), NUON_MOOTA  (Q2RJT7), PURL_THEMA  (Q9X0X3)

		
PDB
[Detailed view]
4 PDB

4CL4; 4CL5; 4OH3; 4Q65

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