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Entry: PS01023

General information about the entry

Entry name [info] PTR2_2
Accession [info] PS01023
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED; 01-NOV-1997 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00784

Name and characterization of the entry

Description [info] PTR2 family proton/oligopeptide symporters signature 2.
Pattern [info]
[FYT]-x(2)-[LMFY]-[FYV]-[LIVMFYWA]-x-[IVG]-N-[LIVMAG]-G-[GSA]-[LIMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 75 in 75 different sequences
Number of true positive hits 72 in 72 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 49
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.00 %
Recall (true positives / (true positives + false negatives)) 59.50 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
72 sequences

DTPA_CHRVO  (Q7NRM5    ), DTPA_CITK8  (A8AH15    ), DTPA_CROTZ  (C9Y3M8    ), 
DTPA_ECO57  (Q8X651    ), DTPA_ECOL6  (Q8FH91    ), DTPA_ECOLI  (P77304    ), 
DTPA_EDWTE  (D0Z7W2    ), DTPA_ENT38  (A4W9W3    ), DTPA_ERWP6  (D2TBH1    ), 
DTPA_KLEP3  (B5XWP3    ), DTPA_PECCP  (C6DH09    ), DTPA_PROMH  (B4EY98    ), 
DTPA_SALTI  (Q8Z6Q5    ), DTPA_SALTY  (Q8ZPM6    ), DTPA_SERP5  (A8GDZ4    ), 
DTPA_YERPE  (Q0WEG0    ), DTPB_AERHH  (A0KMY1    ), DTPB_ECOLI  (P36837    ), 
DTPB_EDWTE  (D0ZGL2    ), DTPB_PHOAA  (B6VMU9    ), DTPB_PHOLU  (Q8GFA2    ), 
DTPB_SALTY  (Q8ZLD6    ), DTPB_SHIDS  (Q32AW5    ), DTPB_VIBFM  (B5FDK5    ), 
DTPB_XENBS  (D3V3D1    ), DTPB_YERE8  (A1JRI8    ), DTPC_ECOLI  (P39276    ), 
DTPD_CITK8  (A8AJB3    ), DTPD_CITRI  (D2TNL4    ), DTPD_ECO57  (Q8X9D3    ), 
DTPD_ECOLI  (P75742    ), DTPD_KLEP3  (B5XZE5    ), DTPD_KLEP7  (A6T6E2    ), 
DTPD_SALCH  (Q57RM6    ), DTPD_SALPC  (C0PWD2    ), DTPD_SALT1  (D0ZQC5    ), 
DTPD_SALTY  (Q7CQY0    ), DTPD_SHIFL  (Q83S84    ), DTPT_LACHE  (O07380    ), 
DTPT_LACLA  (P0C2U2    ), DTPT_LACLC  (P0C2U3    ), DTPT_LACLM  (A2RMA8    ), 
PEPT1_CAEEL (Q21219    ), PEPT1_DROME (P91679    ), PEPT2_CAEEL (Q17758    ), 
PEPT3_CAEEL (O01840    ), PTR17_ARATH (Q93Z20    ), PTR1_ARATH  (Q9M390    ), 
PTR26_ARATH (Q84WG0    ), PTR2_ARATH  (P46032    ), PTR2_CANAX  (P46030    ), 
PTR2_SCHPO  (Q9P380    ), PTR2_YEAST  (P32901    ), PTR5_ARATH  (Q9LFB8    ), 
PTR7_ARATH  (Q05085    ), S15A1_CANLF (Q8WMX5    ), S15A1_HUMAN (P46059    ), 
S15A1_MOUSE (Q9JIP7    ), S15A1_RABIT (P36836    ), S15A1_RAT   (P51574    ), 
S15A2_HUMAN (Q16348    ), S15A2_MOUSE (Q9ES07    ), S15A2_RABIT (P46029    ), 
S15A2_RAT   (Q63424    ), S15A3_MOUSE (Q8BPX9    ), S15A3_RAT   (Q924V4    ), 
S15A4_BOVIN (A6QQL0    ), S15A4_HUMAN (Q8N697    ), S15A4_MOUSE (Q91W98    ), 
S15A4_RAT   (O09014    ), S15A4_XENLA (Q68F72    ), YCLF_BACSU  (P94408    )
» more

UniProtKB/Swiss-Prot
False negative sequences
49 sequences

PTR10_ARATH (Q9SK96    ), PTR11_ARATH (Q9SK99    ), PTR12_ARATH (Q8VYE4    ), 
PTR13_ARATH (Q9LFX9    ), PTR14_ARATH (Q9LQL2    ), PTR15_ARATH (Q56XQ6    ), 
PTR16_ARATH (Q93VV5    ), PTR18_ARATH (Q9SX20    ), PTR19_ARATH (Q8H157    ), 
PTR20_ARATH (Q9CAR9    ), PTR21_ARATH (Q8RX77    ), PTR22_ARATH (Q8VZE2    ), 
PTR23_ARATH (Q0WSZ6    ), PTR24_ARATH (Q8RX67    ), PTR25_ARATH (Q9C7U1    ), 
PTR27_ARATH (Q9SZY4    ), PTR28_ARATH (P0CI03    ), PTR29_ARATH (O80436    ), 
PTR30_ARATH (Q8VZR7    ), PTR31_ARATH (Q9SRI2    ), PTR32_ARATH (Q8LPL2    ), 
PTR33_ARATH (Q9LVE0    ), PTR34_ARATH (Q9LSF0    ), PTR35_ARATH (Q9LSE8    ), 
PTR36_ARATH (Q3EAQ5    ), PTR37_ARATH (Q9M1E2    ), PTR38_ARATH (Q9M1E1    ), 
PTR39_ARATH (Q9M175    ), PTR3_ARATH  (Q9FNL7    ), PTR40_ARATH (Q9M174    ), 
PTR41_ARATH (Q9M173    ), PTR42_ARATH (Q9M172    ), PTR43_ARATH (Q9M171    ), 
PTR44_ARATH (Q944G5    ), PTR45_ARATH (Q9M331    ), PTR46_ARATH (Q9M1I2    ), 
PTR47_ARATH (Q8GXN2    ), PTR48_ARATH (Q9LYD5    ), PTR49_ARATH (Q9LYR6    ), 
PTR4_ARATH  (Q9FNL8    ), PTR50_ARATH (Q9LFR1    ), PTR51_ARATH (Q3E9B5    ), 
PTR52_ARATH (Q3E8X3    ), PTR53_ARATH (Q9LV10    ), PTR54_ARATH (Q9FM20    ), 
PTR6_ARATH  (Q9M817    ), PTR8_ARATH  (Q9M9V7    ), PTR9_ARATH  (Q0WP01    ), 
S15A3_HUMAN (Q8IY34    )
» more

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

NUON2_STRGG (B1W4V1    ), NUON_MOOTA  (Q2RJT7    ), PURL_THEMA  (Q9X0X3    )

		
PDB
[Detailed view]
4 PDB

4OH3; 4Q65; 5A2N; 5A2O

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