Entry: PS01026

General information about the entry
Entry name PHOTOSYSTEM_I_PSAGK
Accession number PS01026
Entry type PATTERN
Date JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00786
Name and characterization of the entry
DescriptionPhotosystem I psaG and psaK proteins signature.
Pattern [GTND]-[FPMI]-x-[LIVMH]-x-[DEAT]-x(2)-[GA]-x-[GTAM]-[STA]-x-G-H-x-[LIVM]- [GAS].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 25 hits in 25 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 25 hits in 25 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 6
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
PSAG_ARATH  (Q9S7N7), PSAG_CHLRE  (P14224), PSAG_HORVU  (Q00327), 
PSAG_SPIOL  (P12357), PSAG_TORRU  (Q9SPM4), PSAK1_SYNY3 (P72712), 
PSAK2_NOSS1 (Q8YLK8), PSAK2_SYNY3 (P74564), PSAK_ARATH  (Q9SUI5), 
PSAK_CHLRE  (P14225), PSAK_CYACA  (O19902), PSAK_GALSU  (P31567), 
PSAK_GRATL  (Q6B8M4), PSAK_GUITH  (O78444), PSAK_HORVU  (P36886), 
PSAK_MASLA  (Q9S3W9), PSAK_MEDSA  (Q9ZT05), PSAK_NOSP7  (B2IWT4), 
PSAK_PORPU  (P51370), PSAK_PORYE  (Q1XDB7), PSAK_SYNEL  (P0A426), 
PSAK_SYNPW  (A5GL35), PSAK_SYNPX  (Q7U6P8), PSAK_THEEB  (P0A425), 
PSAK_THEVL  (P23318)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
PSAG_CUCSA  (P42049), PSAG_PEA    (P20120), PSAK_ANAVT  (P23317), 
PSAK_CUCSA  (P42051), PSAK_PEA    (P17226), PSAK_SPIOL  (P14627)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1YO9; 2O01; 2WSC; 2WSE; 2WSF; 3LW5;

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