Entry: PS01030

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General information about the entry

Entry name [info] RNA_POL_M_15KD
Accession [info] PS01030
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00790

Name and characterization of the entry

Description [info] RNA polymerases M / 15 Kd subunits signature.
Pattern [info]
[FY]-C-x-[DEKSTG]-C-[GNK]-[DNSA]-[LIVMHG]-[LIVM]-x(8,14)-C-x(1,2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 31 in 31 different sequences
Number of true positive hits 30 in 30 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.77 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
30 sequences

RPA12_BOVIN (Q1RMP0), RPA12_HUMAN (Q9P1U0), RPA12_MACMU (Q5TM50), 
RPA12_MOUSE (Q791N7), RPA12_PANTR (Q1XHV8), RPA12_RAT   (Q6MFY5), 
RPA12_SCHPO (O94703), RPA12_YEAST (P32529), RPB9A_ARATH (Q6NLH0), 
RPB9B_ARATH (Q8L5V0), RPB9_ASHGO  (Q755B3), RPB9_BOVIN  (Q32P73), 
RPB9_CANGA  (Q6FS48), RPB9_DROME  (P36958), RPB9_ENCCU  (Q8SQU1), 
RPB9_HUMAN  (P36954), RPB9_MOUSE  (P60898), RPB9_PIG    (P60899), 
RPB9_SCHPO  (O74635), RPB9_YEAST  (P27999), RPC10_BOVIN (Q2M2S7), 
RPC10_HUMAN (Q9Y2Y1), RPC10_MOUSE (Q9CQZ7), RPC10_SCHPO (O13896), 
RPC10_YEAST (Q04307), RPOM_ARCFU  (O29033), RPOM_METJA  (Q58548), 
RPOM_METTH  (O27369), RPOM_SULAC  (Q07271), RPOM_THECE  (Q56254)
» More

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

SEC23_ENCCU (Q8SQX2)

		
PDB
[Detailed view]
103 PDB

1I3Q; 1I50; 1I6H; 1K83; 1NIK; 1NT9; 1PQV; 1R5U; 1R9S; 1R9T; 1SFO; 1TWA; 1TWC; 1TWF; 1TWG; 1TWH; 1WCM; 1Y1V; 1Y1W; 1Y1Y; 1Y77; 2B63; 2B8K; 2E2H; 2E2I; 2E2J; 2JA5; 2JA6; 2JA7; 2JA8; 2NVQ; 2NVT; 2NVX; 2NVY; 2NVZ; 2R7Z; 2R92; 2R93; 2VUM; 2YU9; 3CQZ; 3FKI; 3GTG; 3GTJ; 3GTK; 3GTL; 3GTM; 3GTO; 3GTP; 3GTQ; 3H0G; 3H3V; 3HOU; 3HOV; 3HOW; 3HOX; 3HOY; 3HOZ; 3I4M; 3I4N; 3J0K; 3J1N; 3K1F; 3K7A; 3M3Y; 3M4O; 3PO2; 3PO3; 3QT1; 3RZD; 3RZO; 3S14; 3S15; 3S16; 3S17; 3S1M; 3S1N; 3S1Q; 3S1R; 3S2D; 3S2H; 4A3B; 4A3C; 4A3D; 4A3E; 4A3F; 4A3G; 4A3I; 4A3J; 4A3K; 4A3L; 4A3M; 4A93; 4BBR; 4BBS; 4BXX; 4BXZ; 4BY1; 4BY7; 4C2M; 4C3H; 4C3I; 4C3J
» More

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