Entry: PS01041

General information about the entry
Entry name STATHMIN_2
Accession number PS01041
Entry type PATTERN
Date NOV-1995 (CREATED); DEC-2001 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00487
Name and characterization of the entry
DescriptionStathmin family signature 2.
Pattern A-E-[KR]-R-E-H-E-[KR]-E-V.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 27 hits in 27 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 27 hits in 27 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 93.10 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
STM1A_XENLA (Q09006), STM2A_XENLA (Q09001), STM2B_XENLA (Q09002), 
STMN1_BOVIN (Q3T0C7), STMN1_CHICK (P31395), STMN1_GECJA (A9YWH3), 
STMN1_HUMAN (P16949), STMN1_MACFA (Q4R712), STMN1_MOUSE (P54227), 
STMN1_PIG   (Q6DUB7), STMN1_RAT   (P13668), STMN2_CHICK (Q90987), 
STMN2_HUMAN (Q93045), STMN2_MOUSE (P55821), STMN2_RAT   (P21818), 
STMN3_BOVIN (A4IFK9), STMN3_CHICK (O93388), STMN3_HUMAN (Q9NZ72), 
STMN3_MACFA (Q4R4N5), STMN3_MOUSE (O70166), STMN3_PONAB (Q5R8C6), 
STMN3_RAT   (Q9JHU6), STMN4_HUMAN (Q9H169), STMN4_MOUSE (P63042), 
STMN4_PONAB (Q5R4C5), STMN4_RAT   (P63043), STMN4_XENLA (Q09004)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
STMD1_HUMAN (H3BQB6), STMD1_MOUSE (Q6P3A1)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
STM1B_XENLA (Q09005)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1SA0; 1SA1; 1Z2B; 3DU7; 3E22; 3HKB; 3HKC; 3HKD; 3HKE; 3N2G; 3N2K; 3RYC; 3RYF; 3RYH; 3RYI; 3UT5; 4EB6; 4I4T; 4I50; 4I55; 4IHJ; 4IIJ;

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