Entry: PS01053

General information about the entry
Entry name ARGINASE_1
Accession number PS01053
Entry type PATTERN
Date NOV-1995 (CREATED); NOV-1995 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00135
Name and characterization of the entry
DescriptionArginase family signature.
Pattern [ST]-[LIVMFY]-D-[LIVM]-D-x(3)-[PAQ]-x(3)-P-[GSA]-x(7)-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 143 hits in 143 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 143 hits in 143 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 71
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 66.82 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 3,manganese
  • `Interesting' site in the pattern: 5,manganese
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ARGI1_ARATH (P46637), ARGI1_BOVIN (Q2KJ64), ARGI1_HUMAN (P05089), 
ARGI1_MOUSE (Q61176), ARGI1_PIG   (Q95JC8), ARGI1_RABIT (Q95KM0), 
ARGI1_RAT   (P07824), ARGI1_SCHPO (P37818), ARGI1_XENLA (P30759), 
ARGI2_BOVIN (Q58DL1), ARGI2_HUMAN (P78540), ARGI2_MOUSE (O08691), 
ARGI2_RABIT (Q4VK78), ARGI2_RAT   (O08701), ARGI2_SCHPO (Q10066), 
ARGI_AGRT5  (P14012), ARGI_ASHGO  (Q74ZW4), ARGI_BACCD  (P53608), 
ARGI_BACSU  (P39138), ARGI_BREBE  (Q7M0Z3), ARGI_BRUAB  (P0A2Y1), 
ARGI_BRUME  (P0A2X9), ARGI_BRUSU  (P0A2Y0), ARGI_COCIM  (Q1E180), 
ARGI_COCP7  (P40906), ARGI_EMENI  (Q12611), ARGI_LITCT  (P49900), 
ARGI_NEUCR  (P33280), ARGI_STAAC  (P60086), ARGI_STAAM  (P60087), 
ARGI_STAAN  (P60088), ARGI_STAAR  (Q6GER3), ARGI_STAAS  (Q6G7E9), 
ARGI_STAAW  (Q8NVE3), ARGI_YEAST  (P00812), ARGN1_XENLA (Q91553), 
ARGN2_XENLA (Q91554), ARGN3_XENLA (Q91555), GBH_ARTS8   (Q8KZT5), 
HUTG_AERHH  (A0KF85), HUTG_BACHD  (Q9KBE3), HUTG_BACSU  (P42068), 
HUTG_BORBR  (Q7WJ55), HUTG_BURPP  (B2TFB8), HUTG_BURXL  (Q13PQ0), 
HUTG_CHRVO  (P60109), HUTG_CITK8  (A8AJ18), HUTG_CUPNH  (Q0KFM5), 
HUTG_CUPPJ  (Q471H6), HUTG_ENT38  (A4W8B2), HUTG_ENTAE  (P19452), 
HUTG_HAHCH  (Q2SEP7), HUTG_KLEP3  (B5XZ82), HUTG_KLEP7  (A6T6K8), 
HUTG_NOCFA  (Q5Z0G1), HUTG_PHOLL  (P60110), HUTG_PHOPR  (Q6LQ58), 
HUTG_RHOOB  (C1BBD1), HUTG_RHOSR  (Q0S7R0), HUTG_STRGC  (A8AZ72), 
HUTG_VIBC3  (A5F1X7), HUTG_VIBCH  (Q9KSQ2), HUTG_VIBCM  (C3LLQ0), 
HUTG_VIBF1  (Q5E0C4), HUTG_VIBPA  (Q87Q75), HUTG_VIBVU  (Q8DA19), 
HUTG_VIBVY  (P60111), PAH_STRC2   (P0DJQ4), PAH_STRCL   (P0DJQ3), 
SPEB1_SCHPO (Q10088), SPEB1_SYNY3 (P72703), SPEB2_SCHPO (O42887), 
SPEB2_SYNY3 (P73270), SPEB3_SCHPO (Q9C0Y9), SPEB_BACAN  (Q81JT1), 
SPEB_BACCR  (Q814Q2), SPEB_BACHD  (Q9K6B9), SPEB_BACSU  (P70999), 
SPEB_BLOFL  (Q7VRG4), SPEB_CHICK  (Q90XD2), SPEB_CHRVO  (Q7P0S6), 
SPEB_CITK8  (A8APF8), SPEB_CROS8  (A7MJQ1), SPEB_ECO24  (A7ZR59), 
SPEB_ECO27  (B7UHY3), SPEB_ECO45  (B7MMC5), SPEB_ECO55  (B7LFJ6), 
SPEB_ECO57  (P60652), SPEB_ECO5E  (B5YQD4), SPEB_ECO7I  (B7NI01), 
SPEB_ECO81  (B7MZN5), SPEB_ECO8A  (B7LYW6), SPEB_ECOBW  (C5A0K6), 
SPEB_ECODH  (B1XF99), SPEB_ECOHS  (A8A477), SPEB_ECOK1  (A1AFC5), 
SPEB_ECOL5  (Q0TDR4), SPEB_ECOL6  (Q8FE36), SPEB_ECOLC  (B1IT67), 
SPEB_ECOLI  (P60651), SPEB_ECOLU  (B7N7I9), SPEB_ECOSE  (B6I775), 
SPEB_ECOSM  (B1LDE6), SPEB_ECOUT  (Q1R791), SPEB_EDWI9  (C5BAV1), 
SPEB_ENT38  (A4WE75), SPEB_ESCF3  (B7LPE7), SPEB_HUMAN  (Q9BSE5), 
SPEB_KLEP3  (B5XUB2), SPEB_KLEP7  (A6TDU9), SPEB_NEIG1  (Q5F6R3), 
SPEB_NEIG2  (B4RP98), SPEB_NEIM0  (A9M254), SPEB_NEIMA  (P60653), 
SPEB_NEIMB  (P60654), SPEB_NEIMF  (A1KVF9), SPEB_PHOLL  (Q7N122), 
SPEB_PROMH  (B4F1A3), SPEB_PROMI  (Q7X3P1), SPEB_SALA4  (B5F5K3), 
SPEB_SALCH  (Q57K36), SPEB_SALDC  (B5FUJ0), SPEB_SALEP  (B5QXK5), 
SPEB_SALG2  (B5RE39), SPEB_SALHS  (B4THG3), SPEB_SALNS  (B4T5I5), 
SPEB_SALPA  (Q5PJH7), SPEB_SALPB  (A9N3R6), SPEB_SALPC  (C0PY54), 
SPEB_SALPK  (B5BFP3), SPEB_SALSV  (B4TV53), SPEB_SALTI  (P60655), 
SPEB_SALTY  (P60656), SPEB_SERP5  (A8GIX7), SPEB_SHIB3  (B2U0V8), 
SPEB_SHIBS  (Q31WK0), SPEB_SHIDS  (Q32C02), SPEB_SHIF8  (Q0T0V7), 
SPEB_SHIFL  (P60657), SPEB_SHISS  (Q3YXT4), SPEB_SODGM  (Q2NRD3), 
Y309_METJA  (Q57757), YHMF_METFE  (P19268)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
ARGI2_ARATH (Q9ZPF5), ARGI_SOYBN  (O49046), HUTG_AERS4  (A4SSN4), 
HUTG_AROAE  (Q5NZY1), HUTG_CLOTE  (Q893K6), HUTG_COREF  (Q8FQ76), 
HUTG_FUSNN  (Q8RFN0), HUTG_GEOKA  (Q5L086), HUTG_GEOSW  (C5DA16), 
HUTG_GEOTN  (A4IMP1), HUTG_HALS3  (B0R542), HUTG_HALSA  (Q9HQD7), 
HUTG_LEGPA  (Q5X741), HUTG_LEGPH  (Q5ZXM2), HUTG_LEGPL  (Q5WYJ0), 
HUTG_LYSSC  (B1HQK2), HUTG_MACCJ  (B9E7J8), HUTG_PSEA7  (A6V2Q0), 
HUTG_PSEA8  (B7V9J1), HUTG_PSEAB  (Q02PY1), HUTG_PSEAE  (Q9HZ59), 
HUTG_PSEF5  (Q4KJT9), HUTG_PSYCK  (Q1Q9E3), HUTG_RALSO  (Q8XW30), 
HUTG_SALA4  (B5F066), HUTG_SALAR  (A9MJF2), HUTG_SALCH  (Q57RG9), 
HUTG_SALDC  (B5FP55), HUTG_SALEP  (B5QX59), HUTG_SALG2  (B5R755), 
HUTG_SALHS  (B4TC42), HUTG_SALNS  (B4SZJ1), HUTG_SALPA  (Q5PG59), 
HUTG_SALPB  (A9MTJ4), HUTG_SALPC  (C0PWX6), HUTG_SALPK  (B5BC36), 
HUTG_SALSV  (B4TQT3), HUTG_SALTI  (Q8Z899), HUTG_SALTY  (Q8ZQR1), 
HUTG_STAA1  (A7X5U0), HUTG_STAA2  (A6U459), HUTG_STAA3  (Q2FEG2), 
HUTG_STAA8  (Q2FVT2), HUTG_STAA9  (A5IVB6), HUTG_STAAB  (Q2YYV4), 
HUTG_STAAC  (Q5HDM3), HUTG_STAAE  (A6QJH5), HUTG_STAAM  (P63570), 
HUTG_STAAN  (P99158), HUTG_STAAR  (Q6GEA1), HUTG_STAAS  (Q6G6Y7), 
HUTG_STAAT  (A8Z523), HUTG_STAAW  (Q8NV63), HUTG_STACT  (B9DLS6), 
HUTG_STAEQ  (Q5HLR4), HUTG_STAES  (Q8CNA3), HUTG_STAHJ  (Q4L8J3), 
HUTG_STRP1  (Q99XQ9), HUTG_STRP3  (P0CZ66), HUTG_STRP6  (Q5X9K2), 
HUTG_STRP8  (Q8NZ45), HUTG_STRPB  (Q1J9E8), HUTG_STRPC  (Q1JJJ7), 
HUTG_STRPD  (Q1JEK0), HUTG_STRPF  (Q1J4B6), HUTG_STRPG  (A2RGS6), 
HUTG_STRPM  (Q48QY8), HUTG_STRPQ  (P0CZ67), HUTG_STRPZ  (B5XIY3), 
SPEB_MOUSE  (A2AS89), SPEB_RAT    (Q0D2L3)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1CEV; 1D3V; 1GQ6; 1GQ7; 1HQ5; 1HQF; 1HQG; 1HQH; 1HQX; 1P8M; 1P8O; 1P8P; 1P8R; 1PQ3; 1R1O; 1RLA; 1T4P; 1T4R; 1T4S; 1T4T; 1T5F; 1T5G; 1TA1; 1TBH; 1TBJ; 1TBL; 1WVA; 1WVB; 1XFK; 1ZPE; 1ZPG; 2AEB; 2CEV; 2PHA; 2PHO; 2PLL; 2RLA; 2ZAV; 3CEV; 3DJ8; 3E6K; 3E6V; 3E8Q; 3E8Z; 3E9B; 3F80; 3GMZ; 3GN0; 3KV2; 3LP4; 3LP7; 3MFV; 3MFW; 3MJL; 3RLA; 3SJT; 3SKK; 3TF3; 3TH7; 3THE; 3THH; 3THJ; 4CEV; 4FCI; 4FCK; 4GSM; 4GSV; 4GSZ; 4GWC; 4GWD; 4RLA; 5CEV; 5RLA;

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