Entry: PS01079

General information about the entry
Entry name MOCF_BIOSYNTHESIS_2
Accession number PS01079
Entry type PATTERN
Date NOV-1995 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00828
Name and characterization of the entry
DescriptionMolybdenum cofactor biosynthesis proteins signature 2.
Pattern S-x-[GS]-x(2)-D-x(5)-[LIVW]-x(10,12)-[LIV]-x(2)-[KR]-P-G-[KRL]-P-x(2)- [LIVMF]-[GA].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 13 hits in 13 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 13 hits in 13 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 5
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 72.22 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CIN_DROME   (P39205), CNX1_ARATH  (Q39054), GEPH_HUMAN  (Q9NQX3), 
GEPH_MOUSE  (Q8BUV3), GEPH_RAT    (Q03555), MOEA_ECOLI  (P12281), 
MOEA_HAEIN  (P45210), MOEA_NOSS1  (Q44243), MOEA_SALTY  (Q56066), 
MOEA_SYNE7  (Q56207), MOEA_SYNY3  (Q55368), Y666_METJA  (Q58080), 
Y886_METJA  (Q58296)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
GEPH_CHICK  (Q9PW38), GEPH_DICDI  (Q54KM0), MOEA1_MYCTU (O05577), 
MOEA2_MYCTU (O53725), MOEA_BACSU  (O31703)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1FC5; 1G8L; 1G8R; 1T3E; 2FTS; 2FU3; 2NQK; 2NQM; 2NQN; 2NQQ; 2NQR; 2NQS; 2NQU; 2NQV; 2NRP; 2NRS;

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