Entry: PS01080

General information about the entry
Entry name BH1
Accession number PS01080
Entry type PATTERN
Date NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00829
Name and characterization of the entry
DescriptionApoptosis regulator, Bcl-2 family BH1 motif signature.
Pattern [LVMENQ]-[FTLS]-x-[GSDECQ]-[GLPCKH]-x(1,2)-[NST]-[YW]-G-[RK]-[LIV]- [LIVC]-[GAT]-[LIVMF](2)-x-F-[GSAEC]-[GSARY].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 44 hits in 44 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 44 hits in 44 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 14
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 75.86 %
Comments
  • Taxonomic range: Eukaryotes, Eukaryotic viruses
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AR11_XENLA  (Q91828), AR1_XENLA   (Q91827), ARBH_ASFB7  (P42485), 
ARBH_ASFE4  (Q07818), ARBH_ASFK5  (P0C8H4), ARBH_ASFM2  (Q07819), 
ARBH_ASFP4  (P0C8H5), ARBH_ASFWA  (P0C8H6), B2CL1_CHICK (Q07816), 
B2CL1_HUMAN (Q07817), B2CL1_MOUSE (Q64373), B2CL1_PIG   (O77737), 
B2CL1_RAT   (P53563), B2CL2_BOVIN (Q1RMX3), B2CL2_CANFA (Q45T69), 
B2CL2_HUMAN (Q92843), B2CL2_MOUSE (P70345), B2L10_HUMAN (Q9HD36), 
B2LA1_BOVIN (Q3C2I0), B2LA1_HUMAN (Q16548), B2LA1_MOUSE (Q07440), 
BAK_HUMAN   (Q16611), BAK_MOUSE   (O08734), BAX_BOVIN   (O02703), 
BAX_HUMAN   (Q07812), BAX_MOUSE   (Q07813), BAX_RAT     (Q63690), 
BCL2_BOVIN  (O02718), BCL2_CANFA  (Q6R755), BCL2_CHICK  (Q00709), 
BCL2_CRIGR  (Q9JJV8), BCL2_HUMAN  (P10415), BCL2_MOUSE  (P10417), 
BCL2_RAT    (P49950), CED9_CAEBR  (P41957), CED9_CAEEL  (P41958), 
MCL1_CANFA  (Q8HYS5), MCL1_FELCA  (Q7YRZ9), MCL1_HUMAN  (Q07820), 
MCL1_MOUSE  (P97287), MCL1_RAT    (Q9Z1P3), NR13_COTJA  (Q90343), 
V039_FOWPN  (Q9J5G4), VG16_SHV21  (Q01001)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
B2L10_MOUSE (Q9Z0F3), B2L10_RAT   (Q99M66), B2L13_HUMAN (Q9BXK5), 
B2L13_MOUSE (P59017), BOKA_DANRE  (Q6DC66), BOKB_DANRE  (Q7T381), 
BOK_CHICK   (Q9I8I2), BOK_HUMAN   (Q9UMX3), BOK_MOUSE   (O35425), 
BOK_RAT     (Q792S6), EAR_EBVA8   (P0C6Z1), EAR_EBVB9   (P03182), 
EAR_EBVG    (P0C736), NR13_CHICK  (Q90ZN1)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1AF3; 1BXL; 1F16; 1G5J; 1G5M; 1GJH; 1LXL; 1MAZ; 1MK3; 1O0L; 1PQ0; 1PQ1; 1R2D; 1R2E; 1R2G; 1TY4; 1WSX; 1YSG; 1YSI; 1YSN; 1YSW; 1ZY3; 2B48; 2BZW; 2IMS; 2IMT; 2JCN; 2JM6; 2K7W; 2KBW; 2LP8; 2LPC; 2LR1; 2M03; 2M04; 2NL9; 2NLA; 2O1Y; 2O21; 2O22; 2O2F; 2O2M; 2O2N; 2P1L; 2PON; 2PQK; 2ROC; 2ROD; 2VM6; 2VOF; 2VOG; 2VOH; 2VOI; 2W3L; 2XA0; 2Y6W; 2YJ1; 2YQ6; 2YQ7; 2YV6; 2YXJ; 3D7V; 3FDL; 3FDM; 3I1H; 3IHC; 3IHD; 3IHE; 3IIG; 3IIH; 3ILC; 3INQ; 3IO8; 3IO9; 3KJ0; 3KJ1; 3KJ2; 3KZ0; 3MK8; 3MQP; 3PK1; 3PL7; 3QKD; 3R85; 3SP7; 3SPF; 4A1U; 4A1W; 4AQ3; 4B4S; 4BD2; 4BD6; 4BD7; 4BD8; 4BDU; 4EHR; 4G35; 4HNJ; 4HW2; 4HW3; 4HW4;

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission

If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)

File name:

Format: Swiss-Prot Fasta

or