Entry: PS01087

General information about the entry
Entry name RADICAL_ACTIVATING
Accession number PS01087
Entry type PATTERN
Date NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00834
Name and characterization of the entry
DescriptionRadical activating enzymes signature.
Pattern [GVPS]-x-[GKS]-x-[KRS]-x(3)-[FL]-x(2)-G-x(0,1)-C-x(3)-C-x(2)-C-x-[NLF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 42 hits in 42 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 42 hits in 42 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Archaea, Bacteriophages, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 11,iron_sulfur
  • `Interesting' site in the pattern: 13,iron_sulfur
  • `Interesting' site in the pattern: 15,iron_sulfur
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
BSSD_THAAR  (O87941), HPDA_CLOD6  (Q18CP3), HPDA_CLODC  (C9XIS7), 
HPDA_CLODI  (Q84F14), HPDA_CLODR  (C9YHW3), HPDA_CLOSL  (Q38HX2), 
NRDG_BPT4   (P07075), NRDG_ECO57  (P0A9N9), NRDG_ECOLI  (P0A9N8), 
NRDG_HAEIN  (P45080), NRDG_PASMU  (Q9CM94), NRDG_SALTI  (Q8Z138), 
NRDG_SALTY  (Q9L645), NRDG_VIBCH  (Q9KM76), PFLA_CLOPA  (Q46267), 
PFLA_ECO57  (P0A9N6), PFLA_ECOL6  (P0A9N5), PFLA_ECOLI  (P0A9N4), 
PFLA_HAEIN  (P43751), PFLA_LISIN  (P0A443), PFLA_LISMF  (Q71ZR3), 
PFLA_LISMO  (P0A442), PFLA_SHIFL  (P0A9N7), PFLA_STAA3  (Q2FK43), 
PFLA_STAA8  (Q2G1D7), PFLA_STAAB  (Q2YV52), PFLA_STAAC  (Q5HJF3), 
PFLA_STAAM  (Q99WZ6), PFLA_STAAN  (Q7A7X5), PFLA_STAAR  (Q6GK89), 
PFLA_STAAS  (Q6GCP9), PFLA_STAAW  (Q7A1W8), PFLA_STAEQ  (Q5HKI0), 
PFLA_STAES  (Q8CTX5), PFLA_STRMU  (O68575), PFLC_ECOLI  (P32675), 
PFLE_ECOLI  (P75794), Y021_METJA  (Q60332), Y1227_METJA (Q58624), 
Y1632_METJA (Q59026), Y520_HAEIN  (P44743), YJJW_ECOLI  (P39409)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 3C8F; 3CB8;

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