Entry: PS01096

General information about the entry

Entry name [info] PPIC_PPIASE_1
Accession [info] PS01096
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); DEC-2001 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00840

Name and characterization of the entry

Description [info] PpiC-type peptidyl-prolyl cis-trans isomerase signature.
Pattern [info]
F-[GSADEI]-x-[LVAQ]-A-x(3)-[ST]-x(3,4)-[STQ]-x(3,5)-[GER]-G-x-[LIVM]-
[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 120 in 101 different sequences
Number of true positive hits 119 in 100 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 131
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.17 %
Recall (true positives / (true positives + false negatives)) 47.60 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
100 sequences

CBF2_CAMJE  (Q0PAS1    ), CBF2_CAMJJ  (A1VYV6    ), DOD_DROME   (P54353    ), 
ESS1_YEAST  (P22696    ), NIFM_AZOCH  (P23119    ), NIFM_AZOVI  (P14890    ), 
NIFM_KLEOX  (P0A3Z0    ), NIFM_KLEPN  (P0A3Y9    ), PIN1_ARATH  (Q9SL42    ), 
PIN1_BOVIN  (Q5BIN5    ), PIN1_DIGLA  (Q9LEK8    ), PIN1_HUMAN  (Q13526    ), 
PIN1_MACFA  (Q4R383    ), PIN1_MALDO  (Q94G00    ), PIN1_MOUSE  (Q9QUR7    ), 
PLP1_BORBR  (Q7WCX5    ), PLP1_BORPA  (Q7W5E0    ), PLP1_BORPE  (P40415    ), 
PLP_RICBR   (Q1RI35    ), PPIC_ECO57  (P0A9L7    ), PPIC_ECOL6  (P0A9L6    ), 
PPIC_ECOLI  (P0A9L5    ), PPIC_SALTI  (P0A266    ), PPIC_SALTY  (P0A265    ), 
PPID_ECOL6  (P0ADY2    ), PPID_ECOLI  (P0ADY1    ), PPID_HAEDU  (Q7VKX4    ), 
PPID_HAEIN  (P44092    ), PRSA1_BACAN (Q81U45    ), PRSA1_BACCR (Q81GY5    ), 
PRSA2_BACAN (Q81TU1    ), PRSA2_BACCR (Q81GN0    ), PRSA3_BACCR (Q81DT1    ), 
PRSA4_BACCR (Q81CB1    ), PRSA_BACSU  (P24327    ), PRSA_CALS4  (Q8R760    ), 
PRSA_CLOAB  (Q97E99    ), PRSA_CLOB1  (A7FPK5    ), PRSA_CLOB6  (C3KW94    ), 
PRSA_CLOBH  (A5I7R3    ), PRSA_CLOBJ  (C1FNE4    ), PRSA_CLOBK  (B1IGZ5    ), 
PRSA_CLOBL  (A7GJD2    ), PRSA_CLOBM  (B1KTE0    ), PRSA_CLOK1  (B9DY54    ), 
PRSA_CLOK5  (A5N4J2    ), PRSA_GEOKA  (Q5L289    ), PRSA_GEOSW  (C5D6L9    ), 
PRSA_GEOTN  (A4IKU2    ), PRSA_LACLC  (P0C2B5    ), PRSA_LACLS  (Q02VE3    ), 
PRSA_LACPA  (Q02473    ), PRSA_OCEIH  (Q8CXK4    ), SURA_ALKEH  (Q0AC82    ), 
SURA_AROAE  (Q5P7I9    ), SURA_BAUCH  (Q1LSS0    ), SURA_CHRSD  (Q1QZ33    ), 
SURA_COLP3  (Q47VK0    ), SURA_CUPMC  (Q1LRA3    ), SURA_CUPPJ  (Q475Q3    ), 
SURA_DECAR  (Q479U4    ), SURA_ECO57  (P0ABZ8    ), SURA_ECOL6  (P0ABZ7    ), 
SURA_ECOLI  (P0ABZ6    ), SURA_ECOUT  (Q1RGE4    ), SURA_HAEIN  (P44721    ), 
SURA_IDILO  (Q5QVN9    ), SURA_METCA  (Q60B78    ), SURA_METFK  (Q1GZC0    ), 
SURA_NITMU  (Q2YBP3    ), SURA_NITOC  (Q3JAF1    ), SURA_PECAS  (Q6D0E2    ), 
SURA_PHOLL  (Q7N8V5    ), SURA_POLSJ  (Q121Q4    ), SURA_PSEA6  (Q15QB3    ), 
SURA_RALSO  (Q8Y220    ), SURA_RHOFT  (Q223E5    ), SURA_SACD2  (Q21MS8    ), 
SURA_SALCH  (Q57TG8    ), SURA_SALPA  (Q5PDE6    ), SURA_SALTI  (Q8XEV3    ), 
SURA_SALTY  (Q7CR87    ), SURA_SHEDO  (Q12K61    ), SURA_SHEFN  (Q07YK0    ), 
SURA_SHEON  (Q8EB95    ), SURA_SHESM  (Q0HLT0    ), SURA_SHESR  (Q0HS08    ), 
SURA_SHIBS  (Q326I0    ), SURA_SHIDS  (Q32K41    ), SURA_SHIFL  (P0ABZ9    ), 
SURA_SHISS  (Q3Z5V6    ), SURA_SODGM  (Q2NVX4    ), SURA_THIDA  (Q3SGF9    ), 
SURA_YERPA  (Q1C0H3    ), SURA_YERPE  (Q7CG87    ), SURA_YERPN  (Q1CMT0    ), 
SURA_YERPS  (Q66EQ7    ), Y161_HELPJ  (Q9ZMQ7    ), Y175_HELPY  (P56112    ), 
YACD_BACSU  (P37566    )
» more

UniProtKB/Swiss-Prot
False negative sequences
131 sequences

PIN1_RHIO9  (P0C1J8    ), PIN1_SCHPO  (O74448    ), PIN4_ASPFU  (Q4WJM6    ), 
PIN4_BOVIN  (A6QPY8    ), PIN4_DANRE  (Q503Y7    ), PIN4_EMENI  (Q5B5W1    ), 
PIN4_GIBZE  (Q4I665    ), PIN4_HUMAN  (Q9Y237    ), PIN4_MOUSE  (Q9CWW6    ), 
PIN4_NEUCR  (Q7RYY4    ), PIN4_TAEGU  (B5KFL3    ), PIN4_XENTR  (Q6P4K8    ), 
PLP_RICCN   (Q92H91    ), PLP_RICFE   (Q4UKY0    ), PLP_RICPR   (Q9ZCX6    ), 
PLP_RICTY   (Q68WG0    ), PPID_BUCAI  (P57550    ), PPID_BUCAP  (Q8K987    ), 
PPID_BUCBP  (Q89A98    ), PRSA1_LACJO (P60750    ), PRSA1_LACPL (Q88X05    ), 
PRSA1_LISIN (Q92BR2    ), PRSA1_LISMF (Q71ZM6    ), PRSA1_LISMO (Q8Y759    ), 
PRSA1_STRP1 (P60811    ), PRSA1_STRP3 (P0DD42    ), PRSA1_STRP6 (Q5XBH0    ), 
PRSA1_STRP8 (Q8P0E5    ), PRSA1_STRPQ (P0DD43    ), PRSA2_LACJO (P60810    ), 
PRSA2_LACPL (Q88T16    ), PRSA2_LISIN (Q929F4    ), PRSA2_LISMF (Q71XE6    ), 
PRSA2_LISMO (Q8Y557    ), PRSA2_STRP1 (P60812    ), PRSA2_STRP3 (P0DD44    ), 
PRSA2_STRP6 (Q5X9P6    ), PRSA2_STRP8 (P60813    ), PRSA2_STRPQ (P0DD45    ), 
PRSA3_BACAN (Q81QT1    ), PRSA_BACHD  (Q9KDN4    ), PRSA_CLOP1  (Q0TMG9    ), 
PRSA_CLOPE  (Q8XHK0    ), PRSA_CLOPS  (Q0SQ68    ), PRSA_CLOTE  (Q899I2    ), 
PRSA_ENTFA  (Q837Y9    ), PRSA_EXIS2  (B1YK87    ), PRSA_LACBA  (Q03QE1    ), 
PRSA_LACS1  (Q1WUQ1    ), PRSA_LACSS  (Q38XZ9    ), PRSA_PEDPA  (Q03GD4    ), 
PRSA_STAA1  (A7X3U8    ), PRSA_STAA2  (A6U2U4    ), PRSA_STAA3  (Q2FFQ5    ), 
PRSA_STAA8  (Q2G2S6    ), PRSA_STAAB  (Q2YTZ6    ), PRSA_STAAC  (Q5HET4    ), 
PRSA_STAAE  (A6QI23    ), PRSA_STAAM  (P60747    ), PRSA_STAAN  (P60748    ), 
PRSA_STAAR  (Q6GFL5    ), PRSA_STAAS  (Q6G894    ), PRSA_STAAT  (A8YY10    ), 
PRSA_STAAW  (P60749    ), PRSA_STAEQ  (Q5HN96    ), PRSA_STAES  (Q8CNR4    ), 
PRSA_STRA1  (Q3K1P9    ), PRSA_STRA3  (Q8E602    ), PRSA_STRA5  (Q8E0C6    ), 
PRSA_STRE4  (C0M9L5    ), PRSA_STREM  (B4U214    ), PRSA_STRGC  (A8AYJ0    ), 
PRSA_STRMU  (Q8CVC6    ), PRSA_STRP2  (Q04KU8    ), PRSA_STRP7  (C1C6V8    ), 
PRSA_STRPI  (B1IBE1    ), PRSA_STRPJ  (B8ZPD9    ), PRSA_STRPN  (Q97R51    ), 
PRSA_STRPS  (B2IPD4    ), PRSA_STRR6  (Q8DQ24    ), PRSA_STRS7  (C0MCT3    ), 
PRSA_STRSV  (A3CLY1    ), PRSA_STRZJ  (C1CDX6    ), PRSA_STRZP  (C1CK62    ), 
PRSA_STRZT  (C1CRR9    ), SSP1_NEUCR  (O60045    ), STR12_ARATH (Q93WI0    ), 
SURA_ALCBS  (Q0VMV4    ), SURA_BLOPB  (Q493R5    ), SURA_BORA1  (Q2KXA6    ), 
SURA_BORBR  (Q7WG19    ), SURA_BORPA  (Q7W4J5    ), SURA_BORPE  (Q7VU12    ), 
SURA_BUCAI  (P57240    ), SURA_BUCAP  (Q8KA01    ), SURA_BURCA  (Q1BTQ6    ), 
SURA_BURL3  (Q39D35    ), SURA_BURMA  (Q62MM4    ), SURA_BURP1  (Q3JVW8    ), 
SURA_BURPS  (Q63X78    ), SURA_BURTA  (Q2T116    ), SURA_BURXL  (Q145L3    ), 
SURA_CHRVO  (Q7NQB0    ), SURA_HAHCH  (Q2S9C1    ), SURA_LEGPA  (Q5X877    ), 
SURA_LEGPH  (Q5ZYR3    ), SURA_LEGPL  (Q5WZN0    ), SURA_NITEU  (Q82W17    ), 
SURA_PHOPR  (Q6LV39    ), SURA_PSE14  (Q48NT5    ), SURA_PSEAE  (Q9I5U3    ), 
SURA_PSEF5  (Q4K4X7    ), SURA_PSEHT  (Q3IFD3    ), SURA_PSEPF  (Q3K5T4    ), 
SURA_PSEPK  (Q88QT4    ), SURA_PSESM  (Q88A44    ), SURA_PSEU2  (Q4ZMG7    ), 
SURA_THICR  (Q31F26    ), SURA_VIBCH  (Q9KUS0    ), SURA_VIBF1  (Q5E863    ), 
SURA_VIBPA  (Q87ST4    ), SURA_VIBVU  (Q8DED4    ), SURA_VIBVY  (Q7MP84    ), 
SURA_XANAC  (Q8PP23    ), SURA_XANC5  (Q3BX80    ), SURA_XANC8  (Q4UR41    ), 
SURA_XANCP  (Q8PCE1    ), SURA_XANOM  (Q2NZI6    ), SURA_XANOR  (Q5GWC1    ), 
SURA_XYLFA  (Q9PF40    ), SURA_XYLFT  (Q87AJ0    )
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

PGK_APLCA   (O61471    )

		
PDB
[Detailed view]
66 PDB

1F8A; 1J6Y; 1JNS; 1JNT; 1M5Y; 1NMV; 1NMW; 1PIN; 1ZCN; 1ZK6; 2F21; 2ITK; 2KGJ; 2PV1; 2PV2; 2PV3; 2Q5A; 2RUC; 2RUD; 2RUQ; 2RUR; 2XP3; 2XP4; 2XP5; 2XP6; 2XP7; 2XP8; 2XP9; 2XPA; 2XPB; 2ZQS; 2ZQT; 2ZQU; 2ZQV; 2ZR4; 2ZR5; 2ZR6; 3I6C; 3IK8; 3IKD; 3IKG; 3JYJ; 3KAB; 3KAC; 3KAD; 3KAF; 3KAG; 3KAH; 3KAI; 3KCE; 3NTP; 3ODK; 3OOB; 3RFW; 3TC5; 3TCZ; 3TDB; 3WH0; 4QIB; 4TNS; 4TYO; 4U84; 4U85; 4U86; 4WO7; 5EZ1
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission