To improve security and privacy, we are moving our web pages and services from HTTP to HTTPS.
To give users of web services time to transition to HTTPS, we will support separate HTTP and HTTPS services until the end of 2017.
From January 2018 most HTTP traffic will be automatically redirected to HTTPS. [more...]
View this page in https
Entry: PS01096

General information about the entry

Entry name [info] PPIC_PPIASE_1
Accession [info] PS01096
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED; 01-DEC-2001 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00840

Name and characterization of the entry

Description [info] PpiC-type peptidyl-prolyl cis-trans isomerase signature.
Pattern [info]
F-[GSADEI]-x-[LVAQ]-A-x(3)-[ST]-x(3,4)-[STQ]-x(3,5)-[GER]-G-x-[LIVM]-
[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 120 in 101 different sequences
Number of true positive hits 119 in 100 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 131
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.17 %
Recall (true positives / (true positives + false negatives)) 47.60 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
100 sequences

CBF2_CAMJE  (Q0PAS1    ), CBF2_CAMJJ  (A1VYV6    ), DOD_DROME   (P54353    ), 
ESS1_YEAST  (P22696    ), NIFM_AZOCH  (P23119    ), NIFM_AZOVI  (P14890    ), 
NIFM_KLEOX  (P0A3Z0    ), NIFM_KLEPN  (P0A3Y9    ), PIN1_ARATH  (Q9SL42    ), 
PIN1_BOVIN  (Q5BIN5    ), PIN1_DIGLA  (Q9LEK8    ), PIN1_HUMAN  (Q13526    ), 
PIN1_MACFA  (Q4R383    ), PIN1_MALDO  (Q94G00    ), PIN1_MOUSE  (Q9QUR7    ), 
PLP1_BORBR  (Q7WCX5    ), PLP1_BORPA  (Q7W5E0    ), PLP1_BORPE  (P40415    ), 
PLP_RICBR   (Q1RI35    ), PPIC_ECO57  (P0A9L7    ), PPIC_ECOL6  (P0A9L6    ), 
PPIC_ECOLI  (P0A9L5    ), PPIC_SALTI  (P0A266    ), PPIC_SALTY  (P0A265    ), 
PPID_ECOL6  (P0ADY2    ), PPID_ECOLI  (P0ADY1    ), PPID_HAEDU  (Q7VKX4    ), 
PPID_HAEIN  (P44092    ), PRSA1_BACAN (Q81U45    ), PRSA1_BACCR (Q81GY5    ), 
PRSA2_BACAN (Q81TU1    ), PRSA2_BACCR (Q81GN0    ), PRSA3_BACCR (Q81DT1    ), 
PRSA4_BACCR (Q81CB1    ), PRSA_BACSU  (P24327    ), PRSA_CALS4  (Q8R760    ), 
PRSA_CLOAB  (Q97E99    ), PRSA_CLOB1  (A7FPK5    ), PRSA_CLOB6  (C3KW94    ), 
PRSA_CLOBH  (A5I7R3    ), PRSA_CLOBJ  (C1FNE4    ), PRSA_CLOBK  (B1IGZ5    ), 
PRSA_CLOBL  (A7GJD2    ), PRSA_CLOBM  (B1KTE0    ), PRSA_CLOK1  (B9DY54    ), 
PRSA_CLOK5  (A5N4J2    ), PRSA_GEOKA  (Q5L289    ), PRSA_GEOSW  (C5D6L9    ), 
PRSA_GEOTN  (A4IKU2    ), PRSA_LACLC  (P0C2B5    ), PRSA_LACLS  (Q02VE3    ), 
PRSA_LACPA  (Q02473    ), PRSA_OCEIH  (Q8CXK4    ), SURA_ALKEH  (Q0AC82    ), 
SURA_AROAE  (Q5P7I9    ), SURA_BAUCH  (Q1LSS0    ), SURA_CHRSD  (Q1QZ33    ), 
SURA_COLP3  (Q47VK0    ), SURA_CUPMC  (Q1LRA3    ), SURA_CUPNJ  (Q475Q3    ), 
SURA_DECAR  (Q479U4    ), SURA_ECO57  (P0ABZ8    ), SURA_ECOL6  (P0ABZ7    ), 
SURA_ECOLI  (P0ABZ6    ), SURA_ECOUT  (Q1RGE4    ), SURA_HAEIN  (P44721    ), 
SURA_IDILO  (Q5QVN9    ), SURA_METCA  (Q60B78    ), SURA_METFK  (Q1GZC0    ), 
SURA_NITMU  (Q2YBP3    ), SURA_NITOC  (Q3JAF1    ), SURA_PECAS  (Q6D0E2    ), 
SURA_PHOLL  (Q7N8V5    ), SURA_POLSJ  (Q121Q4    ), SURA_PSEA6  (Q15QB3    ), 
SURA_RALSO  (Q8Y220    ), SURA_RHOFT  (Q223E5    ), SURA_SACD2  (Q21MS8    ), 
SURA_SALCH  (Q57TG8    ), SURA_SALPA  (Q5PDE6    ), SURA_SALTI  (Q8XEV3    ), 
SURA_SALTY  (Q7CR87    ), SURA_SHEDO  (Q12K61    ), SURA_SHEFN  (Q07YK0    ), 
SURA_SHEON  (Q8EB95    ), SURA_SHESM  (Q0HLT0    ), SURA_SHESR  (Q0HS08    ), 
SURA_SHIBS  (Q326I0    ), SURA_SHIDS  (Q32K41    ), SURA_SHIFL  (P0ABZ9    ), 
SURA_SHISS  (Q3Z5V6    ), SURA_SODGM  (Q2NVX4    ), SURA_THIDA  (Q3SGF9    ), 
SURA_YERPA  (Q1C0H3    ), SURA_YERPE  (Q7CG87    ), SURA_YERPN  (Q1CMT0    ), 
SURA_YERPS  (Q66EQ7    ), Y161_HELPJ  (Q9ZMQ7    ), Y175_HELPY  (P56112    ), 
YACD_BACSU  (P37566    )
» more

UniProtKB/Swiss-Prot
False negative sequences
131 sequences

PIN1_RHIO9  (P0C1J8    ), PIN1_SCHPO  (O74448    ), PIN4_ASPFU  (Q4WJM6    ), 
PIN4_BOVIN  (A6QPY8    ), PIN4_DANRE  (Q503Y7    ), PIN4_EMENI  (Q5B5W1    ), 
PIN4_GIBZE  (Q4I665    ), PIN4_HUMAN  (Q9Y237    ), PIN4_MOUSE  (Q9CWW6    ), 
PIN4_NEUCR  (Q7RYY4    ), PIN4_TAEGU  (B5KFL3    ), PIN4_XENTR  (Q6P4K8    ), 
PLP_RICCN   (Q92H91    ), PLP_RICFE   (Q4UKY0    ), PLP_RICPR   (Q9ZCX6    ), 
PLP_RICTY   (Q68WG0    ), PPID_BUCAI  (P57550    ), PPID_BUCAP  (Q8K987    ), 
PPID_BUCBP  (Q89A98    ), PRSA1_LACJO (P60750    ), PRSA1_LACPL (Q88X05    ), 
PRSA1_LISIN (Q92BR2    ), PRSA1_LISMF (Q71ZM6    ), PRSA1_LISMO (Q8Y759    ), 
PRSA1_STRP1 (P60811    ), PRSA1_STRP3 (P0DD42    ), PRSA1_STRP6 (Q5XBH0    ), 
PRSA1_STRP8 (Q8P0E5    ), PRSA1_STRPQ (P0DD43    ), PRSA2_LACJO (P60810    ), 
PRSA2_LACPL (Q88T16    ), PRSA2_LISIN (Q929F4    ), PRSA2_LISMF (Q71XE6    ), 
PRSA2_LISMO (Q8Y557    ), PRSA2_STRP1 (P60812    ), PRSA2_STRP3 (P0DD44    ), 
PRSA2_STRP6 (Q5X9P6    ), PRSA2_STRP8 (P60813    ), PRSA2_STRPQ (P0DD45    ), 
PRSA3_BACAN (Q81QT1    ), PRSA_BACHD  (Q9KDN4    ), PRSA_CLOP1  (Q0TMG9    ), 
PRSA_CLOPE  (Q8XHK0    ), PRSA_CLOPS  (Q0SQ68    ), PRSA_CLOTE  (Q899I2    ), 
PRSA_ENTFA  (Q837Y9    ), PRSA_EXIS2  (B1YK87    ), PRSA_LACBA  (Q03QE1    ), 
PRSA_LACS1  (Q1WUQ1    ), PRSA_LACSS  (Q38XZ9    ), PRSA_PEDPA  (Q03GD4    ), 
PRSA_STAA1  (A7X3U8    ), PRSA_STAA2  (A6U2U4    ), PRSA_STAA3  (Q2FFQ5    ), 
PRSA_STAA8  (Q2G2S6    ), PRSA_STAAB  (Q2YTZ6    ), PRSA_STAAC  (Q5HET4    ), 
PRSA_STAAE  (A6QI23    ), PRSA_STAAM  (P60747    ), PRSA_STAAN  (P60748    ), 
PRSA_STAAR  (Q6GFL5    ), PRSA_STAAS  (Q6G894    ), PRSA_STAAT  (A8YY10    ), 
PRSA_STAAW  (P60749    ), PRSA_STAEQ  (Q5HN96    ), PRSA_STAES  (Q8CNR4    ), 
PRSA_STRA1  (Q3K1P9    ), PRSA_STRA3  (Q8E602    ), PRSA_STRA5  (Q8E0C6    ), 
PRSA_STRE4  (C0M9L5    ), PRSA_STREM  (B4U214    ), PRSA_STRGC  (A8AYJ0    ), 
PRSA_STRMU  (Q8CVC6    ), PRSA_STRP2  (Q04KU8    ), PRSA_STRP7  (C1C6V8    ), 
PRSA_STRPI  (B1IBE1    ), PRSA_STRPJ  (B8ZPD9    ), PRSA_STRPN  (Q97R51    ), 
PRSA_STRPS  (B2IPD4    ), PRSA_STRR6  (Q8DQ24    ), PRSA_STRS7  (C0MCT3    ), 
PRSA_STRSV  (A3CLY1    ), PRSA_STRZJ  (C1CDX6    ), PRSA_STRZP  (C1CK62    ), 
PRSA_STRZT  (C1CRR9    ), SSP1_NEUCR  (O60045    ), STR12_ARATH (Q93WI0    ), 
SURA_ALCBS  (Q0VMV4    ), SURA_BLOPB  (Q493R5    ), SURA_BORA1  (Q2KXA6    ), 
SURA_BORBR  (Q7WG19    ), SURA_BORPA  (Q7W4J5    ), SURA_BORPE  (Q7VU12    ), 
SURA_BUCAI  (P57240    ), SURA_BUCAP  (Q8KA01    ), SURA_BURCA  (Q1BTQ6    ), 
SURA_BURL3  (Q39D35    ), SURA_BURMA  (Q62MM4    ), SURA_BURP1  (Q3JVW8    ), 
SURA_BURPS  (Q63X78    ), SURA_BURTA  (Q2T116    ), SURA_CHRVO  (Q7NQB0    ), 
SURA_HAHCH  (Q2S9C1    ), SURA_LEGPA  (Q5X877    ), SURA_LEGPH  (Q5ZYR3    ), 
SURA_LEGPL  (Q5WZN0    ), SURA_NITEU  (Q82W17    ), SURA_PARXL  (Q145L3    ), 
SURA_PHOPR  (Q6LV39    ), SURA_PSE14  (Q48NT5    ), SURA_PSEAE  (Q9I5U3    ), 
SURA_PSEF5  (Q4K4X7    ), SURA_PSEHT  (Q3IFD3    ), SURA_PSEPF  (Q3K5T4    ), 
SURA_PSEPK  (Q88QT4    ), SURA_PSESM  (Q88A44    ), SURA_PSEU2  (Q4ZMG7    ), 
SURA_THICR  (Q31F26    ), SURA_VIBCH  (Q9KUS0    ), SURA_VIBF1  (Q5E863    ), 
SURA_VIBPA  (Q87ST4    ), SURA_VIBVU  (Q8DED4    ), SURA_VIBVY  (Q7MP84    ), 
SURA_XANAC  (Q8PP23    ), SURA_XANC5  (Q3BX80    ), SURA_XANC8  (Q4UR41    ), 
SURA_XANCP  (Q8PCE1    ), SURA_XANOM  (Q2NZI6    ), SURA_XANOR  (Q5GWC1    ), 
SURA_XYLFA  (Q9PF40    ), SURA_XYLFT  (Q87AJ0    )
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

PGK_APLCA   (O61471    )

		
PDB
[Detailed view]
66 PDB

1F8A; 1J6Y; 1JNS; 1JNT; 1M5Y; 1NMV; 1NMW; 1PIN; 1ZCN; 1ZK6; 2F21; 2ITK; 2KGJ; 2PV1; 2PV2; 2PV3; 2Q5A; 2RUC; 2RUD; 2RUQ; 2RUR; 2XP3; 2XP4; 2XP5; 2XP6; 2XP7; 2XP8; 2XP9; 2XPA; 2XPB; 2ZQS; 2ZQT; 2ZQU; 2ZQV; 2ZR4; 2ZR5; 2ZR6; 3I6C; 3IK8; 3IKD; 3IKG; 3JYJ; 3KAB; 3KAC; 3KAD; 3KAF; 3KAG; 3KAH; 3KAI; 3KCE; 3NTP; 3ODK; 3OOB; 3RFW; 3TC5; 3TCZ; 3TDB; 3WH0; 4QIB; 4TNS; 4TYO; 4U84; 4U85; 4U86; 4WO7; 5EZ1
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission