Entry: PS01096

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General information about the entry

Entry name [info] PPIC_PPIASE_1
Accession [info] PS01096
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); DEC-2001 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00840

Name and characterization of the entry

Description [info] PpiC-type peptidyl-prolyl cis-trans isomerase signature.
Pattern [info]
F-[GSADEI]-x-[LVAQ]-A-x(3)-[ST]-x(3,4)-[STQ]-x(3,5)-[GER]-G-x-[LIVM]-
[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 120 in 101 different sequences
Number of true positive hits 119 in 100 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 131
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.17 %
Recall (true positives / (true positives + false negatives)) 47.60 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
100 sequences

CBF2_CAMJE  (Q0PAS1), CBF2_CAMJJ  (A1VYV6), DOD_DROME   (P54353), 
ESS1_YEAST  (P22696), NIFM_AZOCH  (P23119), NIFM_AZOVI  (P14890), 
NIFM_KLEOX  (P0A3Z0), NIFM_KLEPN  (P0A3Y9), PIN1_ARATH  (Q9SL42), 
PIN1_BOVIN  (Q5BIN5), PIN1_DIGLA  (Q9LEK8), PIN1_HUMAN  (Q13526), 
PIN1_MACFA  (Q4R383), PIN1_MALDO  (Q94G00), PIN1_MOUSE  (Q9QUR7), 
PLP1_BORBR  (Q7WCX5), PLP1_BORPA  (Q7W5E0), PLP1_BORPE  (P40415), 
PLP_RICBR   (Q1RI35), PPIC_ECO57  (P0A9L7), PPIC_ECOL6  (P0A9L6), 
PPIC_ECOLI  (P0A9L5), PPIC_SALTI  (P0A266), PPIC_SALTY  (P0A265), 
PPID_ECOL6  (P0ADY2), PPID_ECOLI  (P0ADY1), PPID_HAEDU  (Q7VKX4), 
PPID_HAEIN  (P44092), PRSA1_BACAN (Q81U45), PRSA1_BACCR (Q81GY5), 
PRSA2_BACAN (Q81TU1), PRSA2_BACCR (Q81GN0), PRSA3_BACCR (Q81DT1), 
PRSA4_BACCR (Q81CB1), PRSA_BACSU  (P24327), PRSA_CALS4  (Q8R760), 
PRSA_CLOAB  (Q97E99), PRSA_CLOB1  (A7FPK5), PRSA_CLOB6  (C3KW94), 
PRSA_CLOBH  (A5I7R3), PRSA_CLOBJ  (C1FNE4), PRSA_CLOBK  (B1IGZ5), 
PRSA_CLOBL  (A7GJD2), PRSA_CLOBM  (B1KTE0), PRSA_CLOK1  (B9DY54), 
PRSA_CLOK5  (A5N4J2), PRSA_GEOKA  (Q5L289), PRSA_GEOSW  (C5D6L9), 
PRSA_GEOTN  (A4IKU2), PRSA_LACLC  (P0C2B5), PRSA_LACLS  (Q02VE3), 
PRSA_LACPA  (Q02473), PRSA_OCEIH  (Q8CXK4), SURA_ALKEH  (Q0AC82), 
SURA_AROAE  (Q5P7I9), SURA_BAUCH  (Q1LSS0), SURA_CHRSD  (Q1QZ33), 
SURA_COLP3  (Q47VK0), SURA_CUPPJ  (Q475Q3), SURA_DECAR  (Q479U4), 
SURA_ECO57  (P0ABZ8), SURA_ECOL6  (P0ABZ7), SURA_ECOLI  (P0ABZ6), 
SURA_ECOUT  (Q1RGE4), SURA_HAEIN  (P44721), SURA_IDILO  (Q5QVN9), 
SURA_METCA  (Q60B78), SURA_METFK  (Q1GZC0), SURA_NITMU  (Q2YBP3), 
SURA_NITOC  (Q3JAF1), SURA_PECAS  (Q6D0E2), SURA_PHOLL  (Q7N8V5), 
SURA_POLSJ  (Q121Q4), SURA_PSEA6  (Q15QB3), SURA_RALME  (Q1LRA3), 
SURA_RALSO  (Q8Y220), SURA_RHOFT  (Q223E5), SURA_SACD2  (Q21MS8), 
SURA_SALCH  (Q57TG8), SURA_SALPA  (Q5PDE6), SURA_SALTI  (Q8XEV3), 
SURA_SALTY  (Q7CR87), SURA_SHEDO  (Q12K61), SURA_SHEFN  (Q07YK0), 
SURA_SHEON  (Q8EB95), SURA_SHESM  (Q0HLT0), SURA_SHESR  (Q0HS08), 
SURA_SHIBS  (Q326I0), SURA_SHIDS  (Q32K41), SURA_SHIFL  (P0ABZ9), 
SURA_SHISS  (Q3Z5V6), SURA_SODGM  (Q2NVX4), SURA_THIDA  (Q3SGF9), 
SURA_YERPA  (Q1C0H3), SURA_YERPE  (Q7CG87), SURA_YERPN  (Q1CMT0), 
SURA_YERPS  (Q66EQ7), Y161_HELPJ  (Q9ZMQ7), Y175_HELPY  (P56112), 
YACD_BACSU  (P37566)
» More

UniProtKB/Swiss-Prot
False negative sequences
131 sequences

PIN1_RHIO9  (P0C1J8), PIN1_SCHPO  (O74448), PIN4_ASPFU  (Q4WJM6), 
PIN4_BOVIN  (A6QPY8), PIN4_DANRE  (Q503Y7), PIN4_EMENI  (Q5B5W1), 
PIN4_GIBZE  (Q4I665), PIN4_HUMAN  (Q9Y237), PIN4_MOUSE  (Q9CWW6), 
PIN4_NEUCR  (Q7RYY4), PIN4_TAEGU  (B5KFL3), PIN4_XENTR  (Q6P4K8), 
PLP_RICCN   (Q92H91), PLP_RICFE   (Q4UKY0), PLP_RICPR   (Q9ZCX6), 
PLP_RICTY   (Q68WG0), PPID_BUCAI  (P57550), PPID_BUCAP  (Q8K987), 
PPID_BUCBP  (Q89A98), PRSA1_LACJO (P60750), PRSA1_LACPL (Q88X05), 
PRSA1_LISIN (Q92BR2), PRSA1_LISMF (Q71ZM6), PRSA1_LISMO (Q8Y759), 
PRSA1_STRP1 (P60811), PRSA1_STRP3 (P0DD42), PRSA1_STRP6 (Q5XBH0), 
PRSA1_STRP8 (Q8P0E5), PRSA1_STRPQ (P0DD43), PRSA2_LACJO (P60810), 
PRSA2_LACPL (Q88T16), PRSA2_LISIN (Q929F4), PRSA2_LISMF (Q71XE6), 
PRSA2_LISMO (Q8Y557), PRSA2_STRP1 (P60812), PRSA2_STRP3 (P0DD44), 
PRSA2_STRP6 (Q5X9P6), PRSA2_STRP8 (P60813), PRSA2_STRPQ (P0DD45), 
PRSA3_BACAN (Q81QT1), PRSA_BACHD  (Q9KDN4), PRSA_CLOP1  (Q0TMG9), 
PRSA_CLOPE  (Q8XHK0), PRSA_CLOPS  (Q0SQ68), PRSA_CLOTE  (Q899I2), 
PRSA_ENTFA  (Q837Y9), PRSA_EXIS2  (B1YK87), PRSA_LACBA  (Q03QE1), 
PRSA_LACS1  (Q1WUQ1), PRSA_LACSS  (Q38XZ9), PRSA_PEDPA  (Q03GD4), 
PRSA_STAA1  (A7X3U8), PRSA_STAA2  (A6U2U4), PRSA_STAA3  (Q2FFQ5), 
PRSA_STAA8  (Q2G2S6), PRSA_STAAB  (Q2YTZ6), PRSA_STAAC  (Q5HET4), 
PRSA_STAAE  (A6QI23), PRSA_STAAM  (P60747), PRSA_STAAN  (P60748), 
PRSA_STAAR  (Q6GFL5), PRSA_STAAS  (Q6G894), PRSA_STAAT  (A8YY10), 
PRSA_STAAW  (P60749), PRSA_STAEQ  (Q5HN96), PRSA_STAES  (Q8CNR4), 
PRSA_STRA1  (Q3K1P9), PRSA_STRA3  (Q8E602), PRSA_STRA5  (Q8E0C6), 
PRSA_STRE4  (C0M9L5), PRSA_STREM  (B4U214), PRSA_STRGC  (A8AYJ0), 
PRSA_STRMU  (Q8CVC6), PRSA_STRP2  (Q04KU8), PRSA_STRP7  (C1C6V8), 
PRSA_STRPI  (B1IBE1), PRSA_STRPJ  (B8ZPD9), PRSA_STRPN  (Q97R51), 
PRSA_STRPS  (B2IPD4), PRSA_STRR6  (Q8DQ24), PRSA_STRS7  (C0MCT3), 
PRSA_STRSV  (A3CLY1), PRSA_STRZJ  (C1CDX6), PRSA_STRZP  (C1CK62), 
PRSA_STRZT  (C1CRR9), SSP1_NEUCR  (O60045), STR12_ARATH (Q93WI0), 
SURA_ALCBS  (Q0VMV4), SURA_BLOPB  (Q493R5), SURA_BORA1  (Q2KXA6), 
SURA_BORBR  (Q7WG19), SURA_BORPA  (Q7W4J5), SURA_BORPE  (Q7VU12), 
SURA_BUCAI  (P57240), SURA_BUCAP  (Q8KA01), SURA_BURCA  (Q1BTQ6), 
SURA_BURMA  (Q62MM4), SURA_BURP1  (Q3JVW8), SURA_BURPS  (Q63X78), 
SURA_BURS3  (Q39D35), SURA_BURTA  (Q2T116), SURA_BURXL  (Q145L3), 
SURA_CHRVO  (Q7NQB0), SURA_HAHCH  (Q2S9C1), SURA_LEGPA  (Q5X877), 
SURA_LEGPH  (Q5ZYR3), SURA_LEGPL  (Q5WZN0), SURA_NITEU  (Q82W17), 
SURA_PHOPR  (Q6LV39), SURA_PSE14  (Q48NT5), SURA_PSEAE  (Q9I5U3), 
SURA_PSEF5  (Q4K4X7), SURA_PSEHT  (Q3IFD3), SURA_PSEPF  (Q3K5T4), 
SURA_PSEPK  (Q88QT4), SURA_PSESM  (Q88A44), SURA_PSEU2  (Q4ZMG7), 
SURA_THICR  (Q31F26), SURA_VIBCH  (Q9KUS0), SURA_VIBF1  (Q5E863), 
SURA_VIBPA  (Q87ST4), SURA_VIBVU  (Q8DED4), SURA_VIBVY  (Q7MP84), 
SURA_XANAC  (Q8PP23), SURA_XANC5  (Q3BX80), SURA_XANC8  (Q4UR41), 
SURA_XANCP  (Q8PCE1), SURA_XANOM  (Q2NZI6), SURA_XANOR  (Q5GWC1), 
SURA_XYLFA  (Q9PF40), SURA_XYLFT  (Q87AJ0)
» More

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

PGK_APLCA   (O61471)

		
PDB
[Detailed view]
54 PDB

1F8A; 1J6Y; 1JNS; 1JNT; 1M5Y; 1NMV; 1NMW; 1PIN; 1ZCN; 1ZK6; 2F21; 2ITK; 2KGJ; 2PV1; 2PV2; 2PV3; 2Q5A; 2XP3; 2XP4; 2XP5; 2XP6; 2XP7; 2XP8; 2XP9; 2XPA; 2XPB; 2ZQS; 2ZQT; 2ZQU; 2ZQV; 2ZR4; 2ZR5; 2ZR6; 3I6C; 3IK8; 3IKD; 3IKG; 3JYJ; 3KAB; 3KAC; 3KAD; 3KAF; 3KAG; 3KAH; 3KAI; 3KCE; 3NTP; 3ODK; 3OOB; 3RFW; 3TC5; 3TCZ; 3TDB; 4TYO
» More

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