Entry: PS01098

General information about the entry

Entry name [info] LIPASE_GDSL_SER
Accession [info] PS01098
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); NOV-1995 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00842

Name and characterization of the entry

Description [info] Lipolytic enzymes "G-D-S-L" family, serine active site.
Pattern [info]
[LIVMFYAG](4)-G-D-S-[LIVM]-x(1,2)-[TAG]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 53 in 47 different sequences
Number of true positive hits 49 in 43 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 121
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 92.45 %
Recall (true positives / (true positives + false negatives)) 28.82 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] active_site at position 4
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
43 sequences

APG_ARATH   (P40602    ), APG_BRANA   (P40603    ), ESTA_PSEAE  (O33407    ), 
ESTA_PSEPU  (Q6B6R8    ), ESTE_VIBMI  (Q07792    ), ESTP_PSEPK  (Q88QS0    ), 
EXL1_ARATH  (Q94CH8    ), EXL2_ARATH  (Q94CH7    ), EXL3_ARATH  (Q94CH6    ), 
EXL4_ARATH  (Q0WUV7    ), EXL5_ARATH  (Q94CH5    ), EXL6_ARATH  (Q93X94    ), 
GCAT_AERHY  (P10480    ), GDL24_ARATH (Q9C653    ), GDL25_ARATH (Q3ECM4    ), 
GDL26_ARATH (F4IBF0    ), GDL27_ARATH (P0DI15    ), GDL28_ARATH (Q9FVV1    ), 
GDL30_ARATH (Q9C9V0    ), GDL4_ARATH  (P0DKJ6    ), GDL52_ARATH (Q9LH73    ), 
GDL55_ARATH (Q3EAQ9    ), GDL56_ARATH (Q9FYD3    ), GDL5_ARATH  (Q9ZUE4    ), 
GDL72_ARATH (Q9FFN0    ), GDL73_ARATH (Q9LZC5    ), GDL87_ARATH (Q9FIA1    ), 
GDL89_ARATH (Q9FMK6    ), GLIP1_ARATH (Q9FLN0    ), GLIP2_ARATH (Q9SYF0    ), 
GLIP3_ARATH (Q9SYF5    ), GRIP4_ARATH (Q9LJP1    ), HLT_VIBPA   (Q99289    ), 
LIP1_PHOLU  (P40601    ), PLB1_CAVPO  (O70320    ), PLB1_HUMAN  (Q6P1J6    ), 
PLB1_MONDO  (Q06HQ7    ), PLB1_MOUSE  (Q3TTY0    ), PLB1_RABIT  (Q05017    ), 
PLB1_RAT    (O54728    ), TESA_ECOL6  (P0ADA2    ), TESA_ECOLI  (P0ADA1    ), 
YTRP_PSEPU  (P40604    )
» more

UniProtKB/Swiss-Prot
False negative sequences
121 sequences

AAE_RAUSE   (Q3MKY2    ), AOAH_HUMAN  (P28039    ), AOAH_MOUSE  (O35298    ), 
AOAH_RABIT  (O18823    ), APG2_ARATH  (Q9LU14    ), AXE2_GEOSE  (Q09LX1    ), 
CPR49_ARATH (Q9SRM5    ), ESM1_ARATH  (Q9LJG3    ), EST_HEVBR   (Q7Y1X1    ), 
EST_PSEAE   (Q9HZY8    ), FUCO3_ARATH (Q9FXE5    ), GDL10_ARATH (Q9SHP6    ), 
GDL11_ARATH (Q3E7I6    ), GDL12_ARATH (Q9FPE4    ), GDL13_ARATH (Q38894    ), 
GDL14_ARATH (Q9C7N5    ), GDL15_ARATH (Q9C7N4    ), GDL16_ARATH (Q9C857    ), 
GDL17_ARATH (Q8L5Z1    ), GDL18_ARATH (Q1H583    ), GDL19_ARATH (Q8W4H8    ), 
GDL1_ARATH  (Q9LMJ3    ), GDL1_CARPA  (P86276    ), GDL20_ARATH (Q9C5N8    ), 
GDL21_ARATH (Q7XA74    ), GDL22_ARATH (Q3ECP6    ), GDL23_ARATH (Q9C648    ), 
GDL29_ARATH (Q9SF78    ), GDL2_ARATH  (O80522    ), GDL31_ARATH (Q9CA68    ), 
GDL32_ARATH (Q9SIF5    ), GDL33_ARATH (Q9SIF3    ), GDL34_ARATH (Q9SJB4    ), 
GDL35_ARATH (O65921    ), GDL36_ARATH (O64468    ), GDL37_ARATH (O64469    ), 
GDL38_ARATH (O80470    ), GDL39_ARATH (Q9SJA9    ), GDL3_ARATH  (Q9LMS5    ), 
GDL40_ARATH (Q9ZQI3    ), GDL41_ARATH (O22918    ), GDL42_ARATH (O22927    ), 
GDL43_ARATH (Q9SIQ3    ), GDL44_ARATH (Q9SIQ2    ), GDL45_ARATH (Q8RWJ4    ), 
GDL46_ARATH (O80443    ), GDL47_ARATH (Q9SIZ6    ), GDL48_ARATH (Q67ZI9    ), 
GDL49_ARATH (Q9MAA1    ), GDL50_ARATH (Q9SF94    ), GDL51_ARATH (Q9LJP2    ), 
GDL53_ARATH (Q9LIN2    ), GDL54_ARATH (Q9LII9    ), GDL57_ARATH (Q9STM6    ), 
GDL58_ARATH (Q9M2R9    ), GDL59_ARATH (Q0WPI9    ), GDL60_ARATH (Q6NLP7    ), 
GDL61_ARATH (Q9M153    ), GDL62_ARATH (Q680C0    ), GDL63_ARATH (O23469    ), 
GDL64_ARATH (O23470    ), GDL65_ARATH (Q93YW8    ), GDL66_ARATH (Q8VY93    ), 
GDL67_ARATH (Q9SVU5    ), GDL68_ARATH (Q9SZW7    ), GDL69_ARATH (Q9LZS9    ), 
GDL6_ARATH  (Q9FXJ1    ), GDL70_ARATH (Q9LZS8    ), GDL71_ARATH (Q9LZS7    ), 
GDL74_ARATH (Q9LZB2    ), GDL75_ARATH (Q9FNP2    ), GDL76_ARATH (Q9LY84    ), 
GDL77_ARATH (Q5PNZ0    ), GDL78_ARATH (Q9FFC6    ), GDL79_ARATH (Q8LB81    ), 
GDL7_ARATH  (Q9FXJ2    ), GDL80_ARATH (Q9FHQ1    ), GDL81_ARATH (Q9FJ25    ), 
GDL82_ARATH (Q9FK75    ), GDL83_ARATH (Q9FJ45    ), GDL84_ARATH (Q6NMR9    ), 
GDL85_ARATH (Q9FJ41    ), GDL86_ARATH (Q9FJ40    ), GDL88_ARATH (Q9FM04    ), 
GDL8_ARATH  (Q8RXT9    ), GDL90_ARATH (Q9FHW9    ), GDL91_ARATH (P0C8Z7    ), 
GDL9_ARATH  (Q94F40    ), GLIP5_ARATH (Q9SSA7    ), GLIP6_ARATH (Q9C996    ), 
GLIP7_ARATH (Q8LFJ9    ), IAH1_BOVIN  (Q3SZ16    ), IAH1_DANRE  (Q503L4    ), 
IAH1_HUMAN  (Q2TAA2    ), IAH1_MOUSE  (Q9DB29    ), IAH1_RAT    (Q711G3    ), 
IAH1_YEAST  (P41734    ), LIP1_STRCO  (Q9S2A5    ), LIP2_STRCO  (Q93J06    ), 
LIP4_ARATH  (Q9FXB6    ), LIPC_BACLD  (Q65NA4    ), LIPC_BACSU  (P42969    ), 
LIP_STRRM   (Q93MW7    ), LTL1_ARATH  (Q9M8Y5    ), PA1B2_BOVIN (P68401    ), 
PA1B2_CHICK (Q5ZMS2    ), PA1B2_DROME (Q9VXP4    ), PA1B2_HUMAN (P68402    ), 
PA1B2_MOUSE (Q61206    ), PA1B2_PONAB (Q5R4G2    ), PA1B2_RAT   (O35264    ), 
PA1B3_BOVIN (Q29460    ), PA1B3_HUMAN (Q15102    ), PA1B3_MOUSE (Q61205    ), 
PA1B3_PONAB (Q5R6X1    ), PA1B3_RAT   (O35263    ), RHA1_ASPAC  (Q00017    ), 
RHGT1_BACSU (O31523    ), RHGT2_BACSU (O31528    ), SSEJ_SALTY  (Q9FD10    ), 
YXIM_BACSU  (P42304    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
3 sequences

AAE_RAUVE   (P86830    ), GDSLH_POPEU (P84985    ), SFAH_HELAN  (P81098    )

		
UniProtKB/Swiss-Prot
False positive sequences
4 sequences

CYF_SYNR3   (A5GRU7    ), NAGS_AJECN  (A6RBX7    ), SMG8_MOUSE  (Q8VE18    ), 
Y479_CLOAB  (Q97LS5    )
» more

PDB
[Detailed view]
5 PDB

1IVN; 1JRL; 1U8U; 1V2G; 3KVN

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