Entry: PS01098

General information about the entry

Entry name [info] LIPASE_GDSL_SER
Accession [info] PS01098
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); NOV-1995 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00842

Name and characterization of the entry

Description [info] Lipolytic enzymes "G-D-S-L" family, serine active site.
Pattern [info]
[LIVMFYAG](4)-G-D-S-[LIVM]-x(1,2)-[TAG]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 53 in 47 different sequences
Number of true positive hits 49 in 43 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 120
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 92.45 %
Recall (true positives / (true positives + false negatives)) 28.99 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] active_site at position 4
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
43 sequences

APG_ARATH   (P40602), APG_BRANA   (P40603), ESTA_PSEAE  (O33407), 
ESTA_PSEPU  (Q6B6R8), ESTE_VIBMI  (Q07792), ESTP_PSEPK  (Q88QS0), 
EXL1_ARATH  (Q94CH8), EXL2_ARATH  (Q94CH7), EXL3_ARATH  (Q94CH6), 
EXL4_ARATH  (Q0WUV7), EXL5_ARATH  (Q94CH5), EXL6_ARATH  (Q93X94), 
GCAT_AERHY  (P10480), GDL24_ARATH (Q9C653), GDL25_ARATH (Q3ECM4), 
GDL26_ARATH (F4IBF0), GDL27_ARATH (P0DI15), GDL28_ARATH (Q9FVV1), 
GDL30_ARATH (Q9C9V0), GDL4_ARATH  (Q8LD23), GDL52_ARATH (Q9LH73), 
GDL55_ARATH (Q3EAQ9), GDL56_ARATH (Q9FYD3), GDL5_ARATH  (Q9ZUE4), 
GDL72_ARATH (Q9FFN0), GDL73_ARATH (Q9LZC5), GDL87_ARATH (Q9FIA1), 
GDL89_ARATH (Q9FMK6), GLIP1_ARATH (Q9FLN0), GLIP2_ARATH (Q9SYF0), 
GLIP3_ARATH (Q9SYF5), GRIP4_ARATH (Q9LJP1), HLT_VIBPA   (Q99289), 
LIP1_PHOLU  (P40601), PLB1_CAVPO  (O70320), PLB1_HUMAN  (Q6P1J6), 
PLB1_MONDO  (Q06HQ7), PLB1_MOUSE  (Q3TTY0), PLB1_RABIT  (Q05017), 
PLB1_RAT    (O54728), TESA_ECOL6  (P0ADA2), TESA_ECOLI  (P0ADA1), 
YTRP_PSEPU  (P40604)
» More

UniProtKB/Swiss-Prot
False negative sequences
120 sequences

AAE_RAUSE   (Q3MKY2), AOAH_HUMAN  (P28039), AOAH_MOUSE  (O35298), 
AOAH_RABIT  (O18823), APG2_ARATH  (Q9LU14), CPR49_ARATH (Q9SRM5), 
ESM1_ARATH  (Q9LJG3), EST_HEVBR   (Q7Y1X1), EST_PSEAE   (Q9HZY8), 
FUCO3_ARATH (Q9FXE5), GDL10_ARATH (Q9SHP6), GDL11_ARATH (Q3E7I6), 
GDL12_ARATH (Q9FPE4), GDL13_ARATH (Q38894), GDL14_ARATH (Q9C7N5), 
GDL15_ARATH (Q9C7N4), GDL16_ARATH (Q9C857), GDL17_ARATH (Q8L5Z1), 
GDL18_ARATH (Q1H583), GDL19_ARATH (Q8W4H8), GDL1_ARATH  (Q9LMJ3), 
GDL1_CARPA  (P86276), GDL20_ARATH (Q9C5N8), GDL21_ARATH (Q7XA74), 
GDL22_ARATH (Q3ECP6), GDL23_ARATH (Q9C648), GDL29_ARATH (Q9SF78), 
GDL2_ARATH  (O80522), GDL31_ARATH (Q9CA68), GDL32_ARATH (Q9SIF5), 
GDL33_ARATH (Q9SIF3), GDL34_ARATH (Q9SJB4), GDL35_ARATH (O65921), 
GDL36_ARATH (O64468), GDL37_ARATH (O64469), GDL38_ARATH (O80470), 
GDL39_ARATH (Q9SJA9), GDL3_ARATH  (Q9LMS5), GDL40_ARATH (Q9ZQI3), 
GDL41_ARATH (O22918), GDL42_ARATH (O22927), GDL43_ARATH (Q9SIQ3), 
GDL44_ARATH (Q9SIQ2), GDL45_ARATH (Q8RWJ4), GDL46_ARATH (O80443), 
GDL47_ARATH (Q9SIZ6), GDL48_ARATH (Q67ZI9), GDL49_ARATH (Q9MAA1), 
GDL50_ARATH (Q9SF94), GDL51_ARATH (Q9LJP2), GDL53_ARATH (Q9LIN2), 
GDL54_ARATH (Q9LII9), GDL57_ARATH (Q9STM6), GDL58_ARATH (Q9M2R9), 
GDL59_ARATH (Q0WPI9), GDL60_ARATH (Q6NLP7), GDL61_ARATH (Q9M153), 
GDL62_ARATH (Q680C0), GDL63_ARATH (O23469), GDL64_ARATH (O23470), 
GDL65_ARATH (Q93YW8), GDL66_ARATH (Q8VY93), GDL67_ARATH (Q9SVU5), 
GDL68_ARATH (Q9SZW7), GDL69_ARATH (Q9LZS9), GDL6_ARATH  (Q9FXJ1), 
GDL70_ARATH (Q9LZS8), GDL71_ARATH (Q9LZS7), GDL74_ARATH (Q9LZB2), 
GDL75_ARATH (Q9FNP2), GDL76_ARATH (Q9LY84), GDL77_ARATH (Q5PNZ0), 
GDL78_ARATH (Q9FFC6), GDL79_ARATH (Q8LB81), GDL7_ARATH  (Q9FXJ2), 
GDL80_ARATH (Q9FHQ1), GDL81_ARATH (Q9FJ25), GDL82_ARATH (Q9FK75), 
GDL83_ARATH (Q9FJ45), GDL84_ARATH (Q6NMR9), GDL85_ARATH (Q9FJ41), 
GDL86_ARATH (Q9FJ40), GDL88_ARATH (Q9FM04), GDL8_ARATH  (Q8RXT9), 
GDL90_ARATH (Q9FHW9), GDL91_ARATH (P0C8Z7), GDL9_ARATH  (Q94F40), 
GLIP5_ARATH (Q9SSA7), GLIP6_ARATH (Q9C996), GLIP7_ARATH (Q8LFJ9), 
IAH1_BOVIN  (Q3SZ16), IAH1_DANRE  (Q503L4), IAH1_HUMAN  (Q2TAA2), 
IAH1_MOUSE  (Q9DB29), IAH1_RAT    (Q711G3), IAH1_YEAST  (P41734), 
LIP1_STRCO  (Q9S2A5), LIP2_STRCO  (Q93J06), LIP4_ARATH  (Q9FXB6), 
LIPC_BACLD  (Q65NA4), LIPC_BACSU  (P42969), LIP_STRRM   (Q93MW7), 
LTL1_ARATH  (Q9M8Y5), PA1B2_BOVIN (P68401), PA1B2_CHICK (Q5ZMS2), 
PA1B2_DROME (Q9VXP4), PA1B2_HUMAN (P68402), PA1B2_MOUSE (Q61206), 
PA1B2_PONAB (Q5R4G2), PA1B2_RAT   (O35264), PA1B3_BOVIN (Q29460), 
PA1B3_HUMAN (Q15102), PA1B3_MOUSE (Q61205), PA1B3_PONAB (Q5R6X1), 
PA1B3_RAT   (O35263), RHA1_ASPAC  (Q00017), RHGT1_BACSU (O31523), 
RHGT2_BACSU (O31528), SSEJ_SALTY  (Q9FD10), YXIM_BACSU  (P42304)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
3 sequences

AAE_RAUVE   (P86830), GDSLH_POPEU (P84985), SFAH_HELAN  (P81098)

		
UniProtKB/Swiss-Prot
False positive sequences
4 sequences

CYF_SYNR3   (A5GRU7), NAGS_AJECN  (A6RBX7), SMG8_MOUSE  (Q8VE18), 
Y479_CLOAB  (Q97LS5)
» More

PDB
[Detailed view]
5 PDB

1IVN; 1JRL; 1U8U; 1V2G; 3KVN

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