PROSITE logo

PROSITE entry PS01106


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_L18E
Accession [info] PS01106
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00850

Name and characterization of the entry

Description [info] Ribosomal protein L18e signature.
Pattern [info] 
[KREWDI]-x-L-x(2)-[PSRG]-[KRS]-x(2)-[RHY]-[PSA]-x-[LIVM]-[NSA]-[LIVM]-x-
[RK]-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 48 in 48 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 20
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.59 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 48 sequences 

RL18A_SCHPO (Q10192), RL18A_XENLA (P09897), RL18A_YEAST (P0CX49), 

RL18B_SCHPO (Q8TFH1), RL18B_XENLA (P02412), RL18B_YEAST (P0CX50), 
RL18E_AERPE (Q9YB51), RL18E_HALMA (P12733), RL18E_HALS3 (B0R4Y3), 
RL18E_HALSA (Q9V2W0), RL18E_METAC (Q8TT44), RL18E_METJA (P54022), 
RL18E_METKA (Q8TVB7), RL18E_METMA (Q8PW46), RL18E_PICTO (Q6L295), 
RL18E_PYRAB (Q9V197), RL18E_PYRFU (Q8U0E5), RL18E_PYRHO (O59302), 
RL18E_SACS2 (P95990), RL18E_SULAC (P39474), RL18E_SULTO (Q96YW1), 
RL18E_THEAC (Q9HL06), RL18E_THEKO (Q5JJF5), RL18E_THEON (B6YSQ4), 
RL18E_THEVO (Q979K3), RL18_ANOGA  (Q7QJM5), RL18_BOMMO  (Q5UAS1), 
RL18_BOVIN  (Q5E973), RL18_CANAL  (A0A1D8PK43), RL18_CANLF  (D0VWQ3), 
RL18_CICAR  (O65729), RL18_DIACI  (Q0PXY6), RL18_DROME  (Q9VS34), 
RL18_DROPS  (Q2M0G4), RL18_HUMAN  (Q07020), RL18_ICTPU  (Q90YV0), 
RL18_MACFA  (Q4R5H8), RL18_MOUSE  (P35980), RL18_OREMO  (P69090), 
RL18_ORENI  (P69091), RL18_PIG(Q95342), RL18_PLUXY  (Q6F442), 
RL18_RAT(P12001), RL18_SALSA  (P24558), RL18_SPOFR  (Q962Y8), 
RL18_TAEAS  (A3F4S0), RL18_TIMBA  (Q4GXG7), RL18_TRYB2  (P50885)
» more

UniProtKB/Swiss-Prot
False negative sequences		 20 sequences 

RL182_ARATH (P42791), RL18E_ARCFU (O29138), RL18E_METB6 (A7IAH4), 

RL18E_METHJ (Q2FTA2), RL18E_METMP (Q6LXM7), RL18E_METPE (B8GEG4), 
RL18E_METTH (O26145), RL18E_NANEQ (Q74MB7), RL18E_PYRAE (Q8ZYQ2), 
RL18_AEDAE  (Q1HR62), RL18_CAEBR  (Q60P81), RL18_CAEEL  (O45946), 
RL18_DICDI  (Q54VZ4), RL18_IXOSC  (Q4PM04), RL18_LEIMA  (Q4QG98), 
RL18_LYSTE  (Q56FG8), RL18_TETTH  (P0DJ17), RL18_THEAN  (Q4UFD5), 
RL18_THEPA  (Q4N438), RL18_TRYCC  (Q4DZP2)
» more

PDB
[Detailed view]		 414 PDB

1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3J6X; 3J6Y; 3J77; 3J78; 3J7O; 3J7P; 3J7Q; 3J7R; 3JCT; 3OW2; 4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4B; 4V4N; 4V5Z; 4V6I; 4V6U; 4V6W; 4V6X; 4V7F; 4V7R; 4V88; 4V8M; 4V8T; 4V8Y; 4V8Z; 4V91; 4V9F; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 5Z3G; 6C0F; 6CB1; 6ELZ; 6EM1; 6EM3; 6EM4; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6LQM; 6LSR; 6LSS; 6LU8; 6M62; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OIG; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SWA; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6W6L; 6WOO; 6XA1; 6XIQ; 6XIR; 6XU6; 6XU7; 6XU8; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 6YLY; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZVK; 7A01; 7AZY; 7B7D; 7BHP; 7BT6; 7BTB; 7CPU; 7CPV; 7F5S; 7LS1; 7LS2; 7MPI; 7MPJ; 7N8B; 7NAC; 7NRC; 7NRD; 7OF1; 7OH3; 7OHP; 7OHQ; 7OHR; 7OHS; 7OHT; 7OHU; 7OHV; 7OHW; 7OHX; 7OHY; 7OW7; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QVP; 7R7A; 7TOO; 7TOP; 7U0H; 7UG6; 7UOO; 7UQB; 7UQZ; 7V08; 7XNX; 7XNY; 7Z34; 7ZPQ; 7ZRS; 7ZS5; 7ZUW; 7ZUX; 7ZW0; 8A3D; 8AAF; 8AGT; 8AGU; 8AGV; 8AGW; 8AGX; 8AGZ; 8BIP; 8BJQ; 8BN3; 8BQD; 8BQX; 8CCS; 8CDL; 8CDR; 8CEH; 8CF5; 8CG8; 8CGN; 8CIV; 8CKU; 8CMJ; 8E5T; 8ESQ; 8ESR; 8ETC; 8ETG; 8ETH; 8ETI; 8ETJ; 8EUB; 8EUG; 8EUI; 8EUP; 8EUY; 8EV3; 8EVP; 8EVQ; 8EVR; 8EVS; 8EVT; 8EWB; 8EWC; 8FKP; 8FKQ; 8FKR; 8FKS; 8FKT; 8FKU; 8FKV; 8FKW; 8FKX; 8FKY; 8FKZ; 8FL0; 8FL2; 8FL3; 8FL4; 8FL6; 8FL7; 8FL9; 8FLA; 8FLB; 8FLC; 8FLD; 8FLE; 8FLF; 8G5Y; 8G5Z; 8G60; 8G61; 8G6J; 8GLP; 8HFR; 8HKU; 8HKV; 8HKY; 8HKZ; 8HL1; 8HL2; 8HL3; 8HL4; 8HL5; 8IDT; 8IDY; 8IE3; 8IFD; 8IFE; 8INE; 8INF; 8INK; 8IPD; 8IPX; 8IPY; 8IR1; 8IR3; 8JDJ; 8JDK; 8JDL; 8JDM; 8K2C; 8K2D; 8K82; 8OHD; 8OJ0; 8OJ5; 8OJ8; 8OVA; 8OVE; 8P8M; 8P8N; 8P8U; 8PFR; 8QFD; 8QOI; 8V83; 8V84; 8V87; 8XSX; 8XSY; 8XSZ; 8Y0U; 8Y0W; 8Y0X; 8YOO; 8YOP
» more