Entry: PS01106

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General information about the entry

Entry name [info] RIBOSOMAL_L18E
Accession [info] PS01106
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); APR-2006 (DATA UPDATE); FEB-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00850

Name and characterization of the entry

Description [info] Ribosomal protein L18e signature.
Pattern [info]
[KREWDI]-x-L-x(2)-[PSRG]-[KRS]-x(2)-[RHY]-[PSA]-x-[LIVM]-[NSA]-[LIVM]-x-
[RK]-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_03 which contains 542'782 sequence entries.


Total number of hits 47 in 47 different sequences
Number of true positive hits 47 in 47 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 20
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.15 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
47 sequences

RL18A_SCHPO (Q10192), RL18A_XENLA (P09897), RL18A_YEAST (P0CX49), 
RL18B_SCHPO (Q8TFH1), RL18B_XENLA (P02412), RL18B_YEAST (P0CX50), 
RL18E_AERPE (Q9YB51), RL18E_HALMA (P12733), RL18E_HALS3 (B0R4Y3), 
RL18E_HALSA (Q9V2W0), RL18E_METAC (Q8TT44), RL18E_METJA (P54022), 
RL18E_METKA (Q8TVB7), RL18E_METMA (Q8PW46), RL18E_PICTO (Q6L295), 
RL18E_PYRAB (Q9V197), RL18E_PYRFU (Q8U0E5), RL18E_PYRHO (O59302), 
RL18E_SULAC (P39474), RL18E_SULSO (P95990), RL18E_SULTO (Q96YW1), 
RL18E_THEAC (Q9HL06), RL18E_THEKO (Q5JJF5), RL18E_THEON (B6YSQ4), 
RL18E_THEVO (Q979K3), RL18_ANOGA  (Q7QJM5), RL18_BOMMO  (Q5UAS1), 
RL18_BOVIN  (Q5E973), RL18_CANFA  (D0VWQ3), RL18_CICAR  (O65729), 
RL18_DIACI  (Q0PXY6), RL18_DROME  (Q9VS34), RL18_DROPS  (Q2M0G4), 
RL18_HUMAN  (Q07020), RL18_ICTPU  (Q90YV0), RL18_MACFA  (Q4R5H8), 
RL18_MOUSE  (P35980), RL18_OREMO  (P69090), RL18_ORENI  (P69091), 
RL18_PIG    (Q95342), RL18_PLUXY  (Q6F442), RL18_RAT    (P12001), 
RL18_SALSA  (P24558), RL18_SPOFR  (Q962Y8), RL18_TAEAS  (A3F4S0), 
RL18_TIMBA  (Q4GXG7), RL18_TRYB2  (P50885)
» More

UniProtKB/Swiss-Prot
False negative sequences
20 sequences

RL182_ARATH (P42791), RL18E_ARCFU (O29138), RL18E_METB6 (A7IAH4), 
RL18E_METHJ (Q2FTA2), RL18E_METMP (Q6LXM7), RL18E_METPE (B8GEG4), 
RL18E_METTH (O26145), RL18E_NANEQ (Q74MB7), RL18E_PYRAE (Q8ZYQ2), 
RL18_AEDAE  (Q1HR62), RL18_CAEBR  (Q60P81), RL18_CAEEL  (O45946), 
RL18_DICDI  (Q54VZ4), RL18_IXOSC  (Q4PM04), RL18_LEIMA  (Q4QG98), 
RL18_LYSTE  (Q56FG8), RL18_TETTH  (P0DJ17), RL18_THEAN  (Q4UFD5), 
RL18_THEPA  (Q4N438), RL18_TRYCC  (Q4DZP2)
» More

PDB
[Detailed view]
81 PDB

1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S1I; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 2ZKR; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3IZS; 3J21; 3J39; 3J3B; 3O58; 3O5H; 3OW2; 3U5E; 3U5I; 3ZF7; 4B6A; 4BYN; 4BYU; 4HUB
» More

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