Entry: PS01106

General information about the entry

Entry name [info] RIBOSOMAL_L18E
Accession [info] PS01106
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); APR-2006 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00850

Name and characterization of the entry

Description [info] Ribosomal protein L18e signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 47 in 47 different sequences
Number of true positive hits 47 in 47 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 20
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.15 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

True positive sequences
47 sequences

RL18A_SCHPO (Q10192), RL18A_XENLA (P09897), RL18A_YEAST (P0CX49), 
RL18B_SCHPO (Q8TFH1), RL18B_XENLA (P02412), RL18B_YEAST (P0CX50), 
RL18E_AERPE (Q9YB51), RL18E_HALMA (P12733), RL18E_HALS3 (B0R4Y3), 
RL18E_HALSA (Q9V2W0), RL18E_METAC (Q8TT44), RL18E_METJA (P54022), 
RL18E_METKA (Q8TVB7), RL18E_METMA (Q8PW46), RL18E_PICTO (Q6L295), 
RL18E_PYRAB (Q9V197), RL18E_PYRFU (Q8U0E5), RL18E_PYRHO (O59302), 
RL18E_SULAC (P39474), RL18E_SULSO (P95990), RL18E_SULTO (Q96YW1), 
RL18E_THEVO (Q979K3), RL18_ANOGA  (Q7QJM5), RL18_BOMMO  (Q5UAS1), 
RL18_BOVIN  (Q5E973), RL18_CANLF  (D0VWQ3), RL18_CICAR  (O65729), 
RL18_DIACI  (Q0PXY6), RL18_DROME  (Q9VS34), RL18_DROPS  (Q2M0G4), 
RL18_HUMAN  (Q07020), RL18_ICTPU  (Q90YV0), RL18_MACFA  (Q4R5H8), 
RL18_MOUSE  (P35980), RL18_OREMO  (P69090), RL18_ORENI  (P69091), 
RL18_PIG    (Q95342), RL18_PLUXY  (Q6F442), RL18_RAT    (P12001), 
RL18_SALSA  (P24558), RL18_SPOFR  (Q962Y8), RL18_TAEAS  (A3F4S0), 
RL18_TIMBA  (Q4GXG7), RL18_TRYB2  (P50885)
» more

False negative sequences
20 sequences

RL182_ARATH (P42791), RL18E_ARCFU (O29138), RL18E_METB6 (A7IAH4), 
RL18E_METTH (O26145), RL18E_NANEQ (Q74MB7), RL18E_PYRAE (Q8ZYQ2), 
RL18_AEDAE  (Q1HR62), RL18_CAEBR  (Q60P81), RL18_CAEEL  (O45946), 
RL18_DICDI  (Q54VZ4), RL18_IXOSC  (Q4PM04), RL18_LEIMA  (Q4QG98), 
RL18_LYSTE  (Q56FG8), RL18_TETTH  (P0DJ17), RL18_THEAN  (Q4UFD5), 
RL18_THEPA  (Q4N438), RL18_TRYCC  (Q4DZP2)
» more

[Detailed view]
67 PDB

1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3OW2; 4ADX
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission