Entry: PS01130

General information about the entry
Entry name SLC26A
Accession number PS01130
Entry type PATTERN
Date NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00870
Name and characterization of the entry
DescriptionSLC26A transporters signature.
Pattern [PAV]-x-[FYLCVI]-[GS]-L-Y-[STAG]-[STAGL]-x(4)-[LIVFYA]-[LIVMST]-[YI]- x(3)-[GA]-[GST]-[SRV]-[KRNP].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 49 hits in 49 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 49 hits in 49 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 12
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 80.33 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CYS14_NEUCR (P23622), DAUA_ECO57  (P0AFR3), DAUA_ECOLI  (P0AFR2), 
NO70_SOYBN  (Q02920), S2611_BOVIN (Q58DD2), S2611_HUMAN (Q86WA9), 
S2611_MOUSE (Q80ZD3), S26A1_HUMAN (Q9H2B4), S26A1_MOUSE (P58735), 
S26A1_RAT   (P45380), S26A2_BOVIN (Q9BEG8), S26A2_BUBBU (Q69DJ1), 
S26A2_HORSE (Q65AC2), S26A2_HUMAN (P50443), S26A2_MOUSE (Q62273), 
S26A2_RAT   (O70531), S26A2_SHEEP (Q9GJY3), S26A3_HUMAN (P40879), 
S26A3_MOUSE (Q9WVC8), S26A3_RAT   (Q924C9), S26A4_HUMAN (O43511), 
S26A4_MOUSE (Q9R155), S26A4_RAT   (Q9R154), S26A5_HUMAN (P58743), 
S26A5_MERUN (Q9JKQ2), S26A5_MOUSE (Q99NH7), S26A5_RAT   (Q9EPH0), 
S26A6_HUMAN (Q9BXS9), SUL1_YEAST  (P38359), SUL2_YEAST  (Q12325), 
SULH1_SCHPO (O74377), SULP3_CAEEL (Q94225), SULX_YEAST  (P53394), 
SUT11_ARATH (Q9SAY1), SUT12_ARATH (Q9MAX3), SUT13_ARATH (Q9FEP7), 
SUT1_STYHA  (P53391), SUT21_ARATH (O04722), SUT22_ARATH (P92946), 
SUT2_STYHA  (P53392), SUT31_ARATH (Q9SV13), SUT32_ARATH (O04289), 
SUT33_ARATH (Q9SXS2), SUT34_ARATH (Q9LW86), SUT35_ARATH (Q94LW6), 
SUT3_STYHA  (P53393), SUT41_ARATH (Q9FY46), SUT42_ARATH (Q8GYH8), 
YBAR_BACSU  (P55189)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
S2610_HUMAN (Q8NG04), S2610_MOUSE (Q5EBI0), S26A7_HUMAN (Q8TE54), 
S26A7_MOUSE (Q8R2Z3), S26A7_PONAB (Q5RAL2), S26A7_RABIT (Q8HY59), 
S26A8_BOVIN (A6QNW6), S26A8_HUMAN (Q96RN1), S26A8_MACFA (Q4R445), 
S26A8_MOUSE (Q8R0C3), SULH2_SCHPO (Q9URY8), SULH3_SCHPO (O59782)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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