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Entry: PS01151

General information about the entry

Entry name [info] FIMBRIAL_USHER
Accession [info] PS01151
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED; 01-NOV-1995 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00886

Name and characterization of the entry

Description [info] Fimbrial biogenesis outer membrane usher protein signature.
Pattern [info]
[VL]-[PASQ]-[PAS]-G-[PAD]-[FY]-x-[LI]-[DNQSTAP]-[DNH]-[LIVMFY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 33 in 33 different sequences
Number of true positive hits 33 in 33 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
33 sequences

AFAC_ECOLX  (P53517    ), AGGC_ECOLX  (P46005    ), CAF1A_YERPE (P26949    ), 
CS32_ECOLX  (P15484    ), ELFC_ECO57  (Q8XDD1    ), ELFC_ECOLI  (P75857    ), 
FAED_ECOLX  (P06970    ), FAND_ECOLX  (P12050    ), FASD_ECOLX  (P46000    ), 
FIMC_BORPE  (P33410    ), FIMD_ECOLI  (P30130    ), FIMD_SALTY  (P37924    ), 
FOCD_ECOLX  (P46009    ), HIFC1_HAEIF (P33397    ), HIFC2_HAEIF (P45997    ), 
HIFC3_HAEIF (P45998    ), HTRE_ECOLI  (P33129    ), LPFC_ECO57  (Q8X5K7    ), 
LPFC_SALTY  (P43662    ), MRKC_KLEPN  (P21647    ), MYFC_YEREN  (P33408    ), 
PAPC_ECOLX  (P07110    ), PEFC_SALTY  (P37868    ), PMFC_PROMH  (P53514    ), 
PSAC_YERPE  (P31527    ), PSAC_YERPS  (Q56983    ), SFMD_ECOLI  (P77468    ), 
YBGQ_ECOLI  (P75750    ), YEHB_ECOLI  (P33341    ), YFCU_ECOLI  (P77196    ), 
YHCD_ECOLI  (P45420    ), YQIG_ECOLI  (P76655    ), YRAJ_ECOLI  (P42915    )
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CSSD1_ECOLX (P53512    ), CSSD2_ECOLX (P53513    ), SEFC_SALEN  (P33388    )

		
PDB
[Detailed view]
6 PDB

2VQI; 3FCG; 3FIP; 3OHN; 3RFZ; 4J3O

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