Entry: PS01162

General information about the entry
Entry name QOR_ZETA_CRYSTAL
Accession number PS01162
Entry type PATTERN
Date NOV-1995 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00058
Name and characterization of the entry
DescriptionQuinone oxidoreductase / zeta-crystallin signature.
Pattern [GSDN]-[DEQHKM]-x(2)-L-x(3)-[SAG](2)-G-G-x-G-x(4)-Q-x(2)-[KRS].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 37 hits in 37 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 37 hits in 37 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 4
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 90.24 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ACAR_METS5  (A4YGN2), ACAR_SULTO  (Q975C8), QOR1_ECOLI  (P28304), 
QORL_ARATH  (Q9ZUC1), QOR_BOVIN   (O97764), QOR_CAVPO   (P11415), 
QOR_HUMAN   (Q08257), QOR_LAMGU   (Q28452), QOR_LEIAM   (P42865), 
QOR_MOUSE   (P47199), QOR_PIG     (Q0MVN8), QOR_PONAB   (Q5R4S7), 
QOR_PSEAE   (P43903), QOR_RAT     (Q6AYT0), QOR_SALTY   (P40783), 
QOR_YEAST   (P38230), RT4I1_BOVIN (Q0VC50), RT4I1_HUMAN (Q8WWV3), 
RT4I1_MOUSE (Q924D0), VAT1L_HUMAN (Q9HCJ6), VAT1L_MOUSE (Q80TB8), 
VAT1_DANRE  (Q8JFV8), VAT1_HUMAN  (Q99536), VAT1_MOUSE  (Q62465), 
VAT1_RAT    (Q3MIE4), VAT1_TORCA  (P19333), ZADH2_BOVIN (Q24K16), 
ZADH2_HUMAN (Q8N4Q0), ZADH2_MOUSE (Q8BGC4), ZDH1_STAAC  (Q5HE19), 
ZDH1_STAAM  (P63475), ZDH1_STAAN  (P99173), ZDH1_STAAR  (Q6GEP3), 
ZDH1_STAAS  (Q6G7C8), ZDH1_STAAW  (Q8NVD1), ZDH1_STAEQ  (Q5HM44), 
ZDH1_STAES  (Q8CRJ7)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
QORL1_BOVIN (Q59A28), QORL1_HUMAN (O95825), QORL1_MOUSE (Q921W4), 
QORX_HUMAN  (Q53FA7)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1QOR; 1YB5; 2C0C; 2VN8; 2WEK; 2X1H; 2X7H; 3QWA; 3QWB; 4A27;

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