PROSITE logo

PROSITE entry PS01164


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] COPPER_AMINE_OXID_1
Accession [info] PS01164
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-MAY-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00895

Name and characterization of the entry

Description [info] Copper amine oxidase topaquinone signature.
Pattern [info] 
[LIVM]-[LIVMA]-[LIVMF]-x(4)-[ST]-x(2)-N-Y-[DE]-[YN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 28 in 28 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 93.33 %
Recall (true positives / (true positives + false negatives)) 96.55 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] cofactor_TPQ at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 28 sequences 

AMO1_ARTS1  (Q07121), AMO1_ASPNG  (Q12556), AMO2_ARATH  (P0DO00), 

AMO2_ARTS1  (Q07123), AMOH_ARTGO  (Q59118), AMO_ECOLI   (P46883), 
AMO_KLEAE   (P49250), AMO_KLEM8   (P80695), AMO_LENCU   (P49252), 
AMO_PEA (Q43077), AMO_PICAN   (P12807), AMO_PINMG   (H2A0M3), 
AO1_ARATH   (O23349), AOC1_HUMAN  (P19801), AOC1_MOUSE  (Q8JZQ5), 
AOC1_PIG(Q9TRC7), AOC1_RAT(P36633), AOC2_HUMAN  (O75106), 
AOC2_MOUSE  (Q812C9), AOC3_BOVIN  (Q9TTK6), AOC3_HUMAN  (Q16853), 
AOC3_MOUSE  (O70423), AOC3_RAT(O08590), AOCX_BOVIN  (Q29437), 
AOCY_BOVIN  (O46406), CAO1_SCHPO  (Q9P7F2), CAO2_SCHPO  (O42890), 
PAOX_ARTGO  (P46881)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

CAOG1_ARATH (Q8H1H9)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
CHAC_YEAST  (P32656), TOP2_IIV3   (Q196X4)


				
	

	

		PDB
[Detailed view]		
		
			132 PDB
			


			1A2V; 1AV4; 1AVK; 1AVL; 1D6U; 1D6Y; 1D6Z; 1DYU; 1EKM; 1IQX; 1IQY; 1IU7; 
			
				1IVU; 1IVW; 1IVX; 1JRQ; 1KSI; 1LVN; 1OAC; 1PU4; 1QAF; 1QAK; 1QAL; 1RJO; 
				1SIH; 1SII; 1SPU; 1TU5; 1UI7; 1UI8; 1US1; 1W2Z; 1W4N; 1W6C; 1W6G; 1WMN; 
				1WMO; 1WMP; 2BT3; 2C10; 2C11; 2CFD; 2CFG; 2CFK; 2CFL; 2CFW; 2CG0; 2CG1; 
				2CWT; 2CWU; 2CWV; 2D1W; 2OOV; 2OQE; 2PNC; 2W0Q; 2WGQ; 2WO0; 2WOF; 2WOH; 
				2Y73; 2Y74; 2YX9; 2ZL8; 3ALA; 3AMO; 3HI7; 3HIG; 3HII; 3K5T; 3N9H; 3SX1; 
				3SXX; 3T0U; 3WA2; 3WA3; 3X3X; 3X3Y; 3X3Z; 3X40; 3X41; 3X42; 4BTW; 4BTX; 
				4BTY; 4EV2; 4EV5; 4KFD; 4KFE; 4KFF; 5ZOU; 5ZOW; 5ZOX; 5ZOY; 5ZOZ; 5ZP0; 
				5ZP1; 5ZP2; 5ZP3; 5ZP4; 5ZP5; 5ZP6; 5ZP7; 5ZP8; 5ZP9; 5ZPA; 5ZPB; 5ZPC; 
				5ZPD; 5ZPE; 5ZPF; 5ZPG; 5ZPH; 5ZPI; 5ZPJ; 5ZPK; 5ZPL; 5ZPM; 5ZPN; 5ZPO; 
				5ZPP; 5ZPQ; 5ZPR; 5ZPS; 5ZPT; 6EZZ; 6L9C; 7F8K; 7WNO; 7WNP; 7YNH; 8J6G
			
			

			» more