Entry: PS01164

General information about the entry

Entry name [info] COPPER_AMINE_OXID_1
Accession [info] PS01164
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED; 01-MAY-2004 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00895

Name and characterization of the entry

Description [info] Copper amine oxidase topaquinone signature.
Pattern [info] 
[LIVM]-[LIVMA]-[LIVMF]-x(4)-[ST]-x(2)-N-Y-[DE]-[YN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 28 in 28 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 93.33 %
Recall (true positives / (true positives + false negatives)) 96.55 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] cofactor_TPQ at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 28 sequences 

AMO1_ARTS1  (Q07121    ), AMO1_ASPNG  (Q12556    ), AMO2_ARATH  (P0DO00    ), 

AMO2_ARTS1  (Q07123    ), AMOH_ARTGO  (Q59118    ), AMO_ECOLI   (P46883    ), 
AMO_KLEAE   (P49250    ), AMO_KLEOK   (P80695    ), AMO_LENCU   (P49252    ), 
AMO_PEA     (Q43077    ), AMO_PICAN   (P12807    ), AMO_PINMG   (H2A0M3    ), 
AO1_ARATH   (O23349    ), AOC1_HUMAN  (P19801    ), AOC1_MOUSE  (Q8JZQ5    ), 
AOC1_PIG    (Q9TRC7    ), AOC1_RAT    (P36633    ), AOC2_HUMAN  (O75106    ), 
AOC2_MOUSE  (Q812C9    ), AOC3_BOVIN  (Q9TTK6    ), AOC3_HUMAN  (Q16853    ), 
AOC3_MOUSE  (O70423    ), AOC3_RAT    (O08590    ), AOCX_BOVIN  (Q29437    ), 
AOCY_BOVIN  (O46406    ), CAO1_SCHPO  (Q9P7F2    ), CAO2_SCHPO  (O42890    ), 
PAOX_ARTGO  (P46881    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

AMO_ARATH   (Q8H1H9    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
CHAC_YEAST  (P32656    ), TOP2_IIV3   (Q196X4    )


				
	

	

		PDB
[Detailed view]		
		
			9 PDB
			


			1AVK; 1EKM; 1IVU; 1UI7; 1WMP; 2WGQ; 3SX1; 3SXX; 3T0U
				
	





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