Entry: PS01165

General information about the entry

Entry name [info] COPPER_AMINE_OXID_2
Accession [info] PS01165
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); JUL-1999 (DATA UPDATE); APR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00895

Name and characterization of the entry

Description [info] Copper amine oxidase copper-binding site signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_06 which contains 548'586 sequence entries.

Total number of hits 25 in 25 different sequences
Number of true positive hits 24 in 24 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.00 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] copper at position 5
Version [info] 1

Cross-references [info]

True positive sequences
24 sequences

AMO1_ARTS1  (Q07121), AMO2_ARTS1  (Q07123), AMO_ARATH   (Q8H1H9), 
AMO_ECOLI   (P46883), AMO_ENTAE   (P49250), AMO_KLEOK   (P80695), 
AMO_PICAN   (P12807), AMO_PINMG   (H2A0M3), AOC1_HUMAN  (P19801), 
AOC1_MOUSE  (Q8JZQ5), AOC1_PIG    (Q9TRC7), AOC1_RAT    (P36633), 
AOC2_HUMAN  (O75106), AOC2_MOUSE  (Q812C9), AOC3_BOVIN  (Q9TTK6), 
AOC3_HUMAN  (Q16853), AOC3_MOUSE  (O70423), AOC3_PONAB  (Q5R9I0), 
AOC3_RAT    (O08590), AOCX_BOVIN  (Q29437), AOCY_BOVIN  (O46406), 
CAO1_SCHPO  (Q9P7F2), CAO2_SCHPO  (O42890), PAOX_ARTGO  (P46881)
» More

False negative sequences
4 sequences

AMO1_ASPNG  (Q12556), AMOH_ARTGO  (Q59118), AMO_LENCU   (P49252), 
AMO_PEA     (Q43077)
» More

False positive sequences
1 sequence


[Detailed view]
91 PDB

1A2V; 1AV4; 1AVK; 1AVL; 1D6U; 1D6Y; 1D6Z; 1DYU; 1EKM; 1IQX; 1IQY; 1IU7; 1IVU; 1IVV; 1IVW; 1IVX; 1JRQ; 1LVN; 1OAC; 1PU4; 1QAF; 1QAK; 1QAL; 1RJO; 1SIH; 1SII; 1SPU; 1TU5; 1UI7; 1US1; 1W4N; 1W5Z; 1W6C; 1W6G; 1WMN; 1WMO; 1WMP; 2BT3; 2C10; 2C11; 2CFD; 2CFG; 2CFK; 2CFL; 2CFW; 2CG0; 2CG1; 2CWT; 2CWU; 2CWV; 2D1W; 2E2T; 2E2U; 2E2V; 2OOV; 2OQE; 2PNC; 2W0Q; 2WGQ; 2WO0; 2WOF; 2WOH; 2Y73; 2Y74; 2YX9; 2ZL8; 3ALA; 3AMO; 3HI7; 3HIG; 3HII; 3K5T; 3KII; 3KN4; 3MPH; 3N9H; 3NBB; 3NBJ; 3SX1; 3SXX; 3T0U; 3WA2; 3WA3; 4BTW; 4BTX; 4BTY; 4EV2; 4EV5; 4KFD; 4KFE; 4KFF
» More

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