Entry: PS01165

General information about the entry

Entry name [info] COPPER_AMINE_OXID_2
Accession [info] PS01165
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); JUL-1999 (DATA UPDATE); OCT-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00895

Name and characterization of the entry

Description [info] Copper amine oxidase copper-binding site signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_11 which contains 549'832 sequence entries.

Total number of hits 25 in 25 different sequences
Number of true positive hits 24 in 24 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.00 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] copper at position 5
Version [info] 1

Cross-references [info]

True positive sequences
24 sequences

AMO1_ARTS1  (Q07121), AMO2_ARTS1  (Q07123), AMO_ARATH   (Q8H1H9), 
AMO_ECOLI   (P46883), AMO_ENTAE   (P49250), AMO_KLEOK   (P80695), 
AMO_PICAN   (P12807), AMO_PINMG   (H2A0M3), AOC1_HUMAN  (P19801), 
AOC1_MOUSE  (Q8JZQ5), AOC1_PIG    (Q9TRC7), AOC1_RAT    (P36633), 
AOC2_HUMAN  (O75106), AOC2_MOUSE  (Q812C9), AOC3_BOVIN  (Q9TTK6), 
AOC3_HUMAN  (Q16853), AOC3_MOUSE  (O70423), AOC3_PONAB  (Q5R9I0), 
AOC3_RAT    (O08590), AOCX_BOVIN  (Q29437), AOCY_BOVIN  (O46406), 
CAO1_SCHPO  (Q9P7F2), CAO2_SCHPO  (O42890), PAOX_ARTGO  (P46881)
» more

False negative sequences
4 sequences

AMO1_ASPNG  (Q12556), AMOH_ARTGO  (Q59118), AMO_LENCU   (P49252), 
AMO_PEA     (Q43077)
» more

False positive sequences
1 sequence


[Detailed view]
97 PDB

1A2V; 1AV4; 1AVK; 1AVL; 1D6U; 1D6Y; 1D6Z; 1DYU; 1EKM; 1IQX; 1IQY; 1IU7; 1IVU; 1IVV; 1IVW; 1IVX; 1JRQ; 1LVN; 1OAC; 1PU4; 1QAF; 1QAK; 1QAL; 1RJO; 1SIH; 1SII; 1SPU; 1TU5; 1UI7; 1US1; 1W4N; 1W5Z; 1W6C; 1W6G; 1WMN; 1WMO; 1WMP; 2BT3; 2C10; 2C11; 2CFD; 2CFG; 2CFK; 2CFL; 2CFW; 2CG0; 2CG1; 2CWT; 2CWU; 2CWV; 2D1W; 2E2T; 2E2U; 2E2V; 2OOV; 2OQE; 2PNC; 2W0Q; 2WGQ; 2WO0; 2WOF; 2WOH; 2Y73; 2Y74; 2YX9; 2ZL8; 3ALA; 3AMO; 3HI7; 3HIG; 3HII; 3K5T; 3KII; 3KN4; 3MPH; 3N9H; 3NBB; 3NBJ; 3SX1; 3SXX; 3T0U; 3WA2; 3WA3; 3X3X; 3X3Y; 3X3Z; 3X40; 3X41; 3X42; 4BTW; 4BTX; 4BTY; 4EV2; 4EV5; 4KFD; 4KFE; 4KFF
» more

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