Entry: PS01165

General information about the entry

Entry name [info] COPPER_AMINE_OXID_2
Accession [info] PS01165
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED; 01-JUL-1999 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00895

Name and characterization of the entry

Description [info] Copper amine oxidase copper-binding site signature.
Pattern [info] 
T-x-[GS]-x(2)-H-[LIVMF]-x(3)-E-[DE]-x-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 26 in 26 different sequences
Number of true positive hits 25 in 25 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 5
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.15 %
Recall (true positives / (true positives + false negatives)) 83.33 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] copper at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 25 sequences 

AMO1_ARTS1  (Q07121    ), AMO2_ARATH  (P0DO00    ), AMO2_ARTS1  (Q07123    ), 

AMO_ARATH   (Q8H1H9    ), AMO_ECOLI   (P46883    ), AMO_KLEAE   (P49250    ), 
AMO_KLEOK   (P80695    ), AMO_PICAN   (P12807    ), AMO_PINMG   (H2A0M3    ), 
AOC1_HUMAN  (P19801    ), AOC1_MOUSE  (Q8JZQ5    ), AOC1_PIG    (Q9TRC7    ), 
AOC1_RAT    (P36633    ), AOC2_HUMAN  (O75106    ), AOC2_MOUSE  (Q812C9    ), 
AOC3_BOVIN  (Q9TTK6    ), AOC3_HUMAN  (Q16853    ), AOC3_MOUSE  (O70423    ), 
AOC3_PONAB  (Q5R9I0    ), AOC3_RAT    (O08590    ), AOCX_BOVIN  (Q29437    ), 
AOCY_BOVIN  (O46406    ), CAO1_SCHPO  (Q9P7F2    ), CAO2_SCHPO  (O42890    ), 
PAOX_ARTGO  (P46881    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 5 sequences 

AMO1_ASPNG  (Q12556    ), AMOH_ARTGO  (Q59118    ), AMO_LENCU   (P49252    ), 

AMO_PEA     (Q43077    ), AO1_ARATH   (O23349    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

THII_PSEPK  (Q88CY4    )


				
	

	

		PDB
[Detailed view]		
		
			97 PDB
			


			1A2V; 1AV4; 1AVK; 1AVL; 1D6U; 1D6Y; 1D6Z; 1DYU; 1EKM; 1IQX; 1IQY; 1IU7; 
			
				1IVU; 1IVV; 1IVW; 1IVX; 1JRQ; 1LVN; 1OAC; 1PU4; 1QAF; 1QAK; 1QAL; 1RJO; 
				1SIH; 1SII; 1SPU; 1TU5; 1UI7; 1US1; 1W4N; 1W5Z; 1W6C; 1W6G; 1WMN; 1WMO; 
				1WMP; 2BT3; 2C10; 2C11; 2CFD; 2CFG; 2CFK; 2CFL; 2CFW; 2CG0; 2CG1; 2CWT; 
				2CWU; 2CWV; 2D1W; 2E2T; 2E2U; 2E2V; 2OOV; 2OQE; 2PNC; 2W0Q; 2WGQ; 2WO0; 
				2WOF; 2WOH; 2Y73; 2Y74; 2YX9; 2ZL8; 3ALA; 3AMO; 3HI7; 3HIG; 3HII; 3K5T; 
				3KII; 3KN4; 3MPH; 3N9H; 3NBB; 3NBJ; 3SX1; 3SXX; 3T0U; 3WA2; 3WA3; 3X3X; 
				3X3Y; 3X3Z; 3X40; 3X41; 3X42; 4BTW; 4BTX; 4BTY; 4EV2; 4EV5; 4KFD; 4KFE; 
				4KFF
			
			

			» more

				
	





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