Entry: PS01177

General information about the entry
Entry name ANAPHYLATOXIN_1
Accession number PS01177
Entry type PATTERN
Date NOV-1997 (CREATED); MAY-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00906
Name and characterization of the entry
DescriptionAnaphylatoxin domain signature.
Pattern [CSH]-C-x(2)-[GAP]-x(7,8)-[GASTDEQR]-C-[GASTDEQL]-x(3,9)-[GASTDEQN]-x(2)- [CE]-x(6,7)-C-C.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 39 hits in 31 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 37 hits in 29 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 2 hits in 2 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 3
  • Precision (true hits / (true hits + false positives)): 94.87 %
  • Recall (true hits / (true hits + false negatives)): 94.87 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 3
  • `Interesting' site in the pattern: 1,disulfide
  • `Interesting' site in the pattern: 2,disulfide
  • `Interesting' site in the pattern: 7,disulfide
  • `Interesting' site in the pattern: 12,disulfide
  • `Interesting' site in the pattern: 14,disulfide
  • `Interesting' site in the pattern: 15,disulfide
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CO31_AUSSU  (Q0ZZJ6), CO32_AUSSU  (A0RZC6), CO3_CAVPO   (P12387), 
CO3_EPTBU   (P98094), CO3_HUMAN   (P01024), CO3_LAMJA   (Q00685), 
CO3_MOUSE   (P01027), CO3_NAJNA   (Q01833), CO3_ONCMY   (P98093), 
CO3_PIG     (P01025), CO3_RAT     (P01026), CO4A_HUMAN  (P0C0L4), 
CO4B_HUMAN  (P0C0L5), CO4B_MOUSE  (P01029), CO4_BOVIN   (P01030), 
CO4_RAT     (P08649), CO5_BOVIN   (P12082), CO5_HUMAN   (P01031), 
CO5_MOUSE   (P06684), CO5_PIG     (P01032), CO5_RAT     (P08650), 
FBLN1_CAEEL (O77469), FBLN1_CHICK (O73775), FBLN1_CHLAE (Q8MJJ9), 
FBLN1_DANRE (O42182), FBLN1_HUMAN (P23142), FBLN1_MOUSE (Q08879), 
FBLN2_HUMAN (P98095), FBLN2_MOUSE (P37889)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
CO3_BOVIN   (Q2UVX4), CO3_NAJKA   (Q91132)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
CO3_RABIT   (P12247), CO3_XENLA   (P23667), CO4_CAVPO   (P19069)
False positive hits (sequences which do not belong to the set under consideration):
FRAS1_MOUSE (Q80T14), KRA51_MOUSE (Q64507)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1C5A; 1CFA; 1KJS; 2A73; 3CU7; 3HQA; 3HQB; 3KLS; 3KM9; 3PRX; 3PVM; 4FXG; 4FXK; 4HW5; 4HWJ; 4I6O;

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