Entry: PS01182

General information about the entry
Entry name GLYCOSYL_HYDROL_F35
Accession number PS01182
Entry type PATTERN
Date NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00910
Name and characterization of the entry
DescriptionGlycosyl hydrolases family 35 putative active site.
Pattern G-G-P-[LIVM](2)-x(2)-Q-x-E-N-E-[FY].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 64 hits in 64 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 64 hits in 64 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 28
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 3
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 69.57 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 10,active_site(?)
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
BGA10_ARATH (Q9FN08), BGA10_ORYSJ (Q67VU7), BGA11_ARATH (Q9SCV1), 
BGA11_ORYSJ (Q6ZJJ0), BGA12_ARATH (Q9SCV0), BGA12_ORYSJ (Q0IZZ8), 
BGA13_ARATH (Q9SCU9), BGA13_ORYSJ (Q7G3T8), BGA14_ARATH (Q9SCU8), 
BGA14_ORYSJ (Q7XFK2), BGA15_ARATH (Q9C6W4), BGA15_ORYSJ (Q0INM3), 
BGA16_ARATH (Q8GX69), BGA17_ARATH (Q93Z24), BGAL1_ARATH (Q9SCW1), 
BGAL1_DICDI (Q54GE1), BGAL1_ORYSJ (Q8RUV9), BGAL2_ARATH (Q9LFA6), 
BGAL2_DICDI (Q54MV6), BGAL2_ORYSJ (Q8W0A1), BGAL3_ARATH (Q9SCV9), 
BGAL4_ARATH (Q9SCV8), BGAL4_ORYSI (A2X2H7), BGAL4_ORYSJ (Q6Z6K4), 
BGAL5_ARATH (Q9MAJ7), BGAL5_ORYSJ (Q10RB4), BGAL6_ARATH (Q9FFN4), 
BGAL6_ORYSJ (Q10NX8), BGAL7_ARATH (Q9SCV5), BGAL7_ORYSJ (Q75HQ3), 
BGAL8_ARATH (Q9SCV4), BGAL8_ORYSJ (Q0DGD7), BGAL9_ARATH (Q9SCV3), 
BGAL9_ORYSJ (Q5Z7L0), BGALA_ASPFC (B0XMP7), BGALA_ASPFN (B8N6V7), 
BGALA_ASPFU (Q4WS33), BGALA_ASPNC (A2QAN3), BGALA_ASPOR (Q2UCU3), 
BGALA_ASPSA (Q4ZHV7), BGALA_NEOFI (A1D1Z9), BGALA_PENEN (B8QGZ3), 
BGALA_PENSQ (Q700S9), BGALE_ASPFC (B0XXE7), BGALE_ASPFU (Q4WG05), 
BGALE_NEOFI (A1DJ58), BGAL_ASPNG  (P29853), BGAL_ASPOF  (P45582), 
BGAL_BOVIN  (Q58D55), BGAL_BRAOL  (P49676), BGAL_CANFA  (Q9TRY9), 
BGAL_DIACA  (Q00662), BGAL_FELCA  (O19015), BGAL_HUMAN  (P16278), 
BGAL_MACFA  (Q60HF6), BGAL_MALDO  (P48981), BGAL_MOUSE  (P23780), 
BGAL_PONAB  (Q5R7P4), BGAL_SOLLC  (P48980), BGAL_XANMN  (P48982), 
GLBL2_HUMAN (Q8IW92), GLBL2_MOUSE (Q3UPY5), GLBL3_MOUSE (A2RSQ1), 
GLBL3_RAT   (Q5XIL5)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
BGALA_EMENI (Q5BFC4), BGALB_ASPFC (B0XNY2), BGALB_ASPFN (B8NKI4), 
BGALB_ASPFU (Q4WRD3), BGALB_ASPNC (A2QA64), BGALB_ASPOR (Q2U6P1), 
BGALB_ASPTN (Q0CMF3), BGALB_BOTFB (A6RPN7), BGALB_EMENI (Q5BEQ0), 
BGALB_NEOFI (A1D199), BGALB_PENCW (B6GW04), BGALB_PENMQ (B6QLF0), 
BGALB_PYRTR (B2W791), BGALB_SCLS1 (A7EBU5), BGALC_ASPCL (A1CE56), 
BGALC_ASPFC (B0Y752), BGALC_ASPFN (B8N2I5), BGALC_ASPFU (Q4WNE4), 
BGALC_ASPNC (A2QL84), BGALC_ASPOR (Q2UMD5), BGALC_NEOFI (A1DM65), 
BGALC_PENCW (B6H5X9), BGALC_PENMQ (B6QHA9), BGALC_SCLS1 (A7EZS5), 
GLB1L_HUMAN (Q6UWU2), GLB1L_MACFA (Q95LV1), GLB1L_MOUSE (Q8VC60), 
GLBL3_HUMAN (Q8NCI6)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
BGAL_HORVU  (P83252), BGAL_PHODC  (P85412), BGAL_PINPS  (P81669)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1TG7; 1XC6; 3THC; 3THD;

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