Entry: PS01185

General information about the entry

Entry name [info] CTCK_1
Accession [info] PS01185
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00912

Name and characterization of the entry

Description [info] C-terminal cystine knot signature.
Pattern [info]
C-C-x(13)-C-x(2)-[GN]-x(12)-C-x-C-x(2,4)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 48 in 48 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 33
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 59.26 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 2
Site [info] disulfide at position 4
Site [info] disulfide at position 8
Site [info] disulfide at position 10
Site [info] disulfide at position 12
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
48 sequences

CTGF_BOVIN  (O18739    ), CTGF_HUMAN  (P29279    ), CTGF_MOUSE  (P29268    ), 
CTGF_PIG    (O19113    ), CTGF_RAT    (Q9R1E9    ), CYR61_CHICK (P19336    ), 
CYR61_HUMAN (O00622    ), CYR61_MOUSE (P18406    ), CYR61_PANTR (A5A6L1    ), 
CYR61_RAT   (Q9ES72    ), GPHA2_MOUSE (Q925Q5    ), GPHA2_RAT   (Q925Q4    ), 
HMCT_BOMMO  (P98092    ), MUC19_HUMAN (Q7Z5P9    ), MUC19_MOUSE (Q6PZE0    ), 
MUC2L_RAT   (P98089    ), MUC2_HUMAN  (Q02817    ), MUC2_MOUSE  (Q80Z19    ), 
MUC5A_HUMAN (P98088    ), MUC5B_HUMAN (Q9HC84    ), MUCAP_PIG   (P12021    ), 
MUCB1_XENLA (P38565    ), MUCS_BOVIN  (P98091    ), NDP_BOVIN   (Q2KI78    ), 
NDP_HUMAN   (Q00604    ), NDP_MACFA   (Q60HE4    ), NDP_MOUSE   (P48744    ), 
NOV_CHICK   (P28686    ), NOV_COTJA   (P42642    ), NOV_HUMAN   (P48745    ), 
NOV_MOUSE   (Q64299    ), NOV_RAT     (Q9QZQ5    ), SLIT1_HUMAN (O75093    ), 
SLIT1_MOUSE (Q80TR4    ), SLIT1_RAT   (O88279    ), SLIT2_HUMAN (O94813    ), 
SLIT2_MOUSE (Q9R1B9    ), SLIT3_HUMAN (O75094    ), SLIT3_MOUSE (Q9WVB4    ), 
SLIT3_RAT   (O88280    ), SLIT_DROME  (P24014    ), VWF_CANLF   (Q28295    ), 
VWF_HUMAN   (P04275    ), VWF_MOUSE   (Q8CIZ8    ), VWF_PIG     (Q28833    ), 
WISP1_HUMAN (O95388    ), WISP1_MOUSE (O54775    ), WISP1_RAT   (Q99PP0    )
» more

UniProtKB/Swiss-Prot
False negative sequences
33 sequences

BURS_AEDAE  (P85316    ), BURS_ANOGA  (Q66Q82    ), BURS_APIME  (A2VB89    ), 
BURS_BOMMO  (Q566B1    ), BURS_CULPP  (P85315    ), BURS_DROME  (Q9VD83    ), 
BURS_MANSE  (Q4FCM6    ), CER1_CHICK  (Q9PWB0    ), CER1_HUMAN  (O95813    ), 
CER1_MOUSE  (O55233    ), CER1_XENLA  (P70041    ), CER1_XENTR  (Q07G34    ), 
NOV_XENLA   (P51609    ), PBURS_ANOGA (Q566B3    ), PBURS_APIME (A2VB90    ), 
PBURS_BOMMO (Q566B2    ), PBURS_DROME (Q9VJS7    ), SOSD1_CHICK (Q6VYA3    ), 
SOSD1_HUMAN (Q6X4U4    ), SOSD1_MOUSE (Q9CQN4    ), SOSD1_PONAB (Q5R5D2    ), 
SOSD1_RAT   (Q642G2    ), SOST_BOVIN  (Q9BG79    ), SOST_CHLAE  (Q9BG78    ), 
SOST_HUMAN  (Q9BQB4    ), SOST_MOUSE  (Q99P68    ), SOST_RAT    (Q99P67    ), 
SSPO_BOVIN  (P98167    ), SSPO_CHICK  (Q2PC93    ), SSPO_HUMAN  (A2VEC9    ), 
SSPO_MOUSE  (Q8CG65    ), SSPO_RAT    (Q700K0    ), WISP3_HUMAN (O95389    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

BURS_PERAM  (P84118    ), VWF_BOVIN   (P80012    )

		
PDB
[Detailed view]
8 PDB

4MY2; 4NT5; 5BPU; 5BQ8; 5BQB; 5BQC; 5BQE; 5CL1

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