Entry: PS01185

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General information about the entry

Entry name [info] CTCK_1
Accession [info] PS01185
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); FEB-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00912

Name and characterization of the entry

Description [info] C-terminal cystine knot signature.
Pattern [info]
C-C-x(13)-C-x(2)-[GN]-x(12)-C-x-C-x(2,4)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_03 which contains 542'782 sequence entries.


Total number of hits 48 in 48 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 33
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 59.26 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 2
Site [info] disulfide at position 4
Site [info] disulfide at position 8
Site [info] disulfide at position 10
Site [info] disulfide at position 12
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
48 sequences

CTGF_BOVIN  (O18739), CTGF_HUMAN  (P29279), CTGF_MOUSE  (P29268), 
CTGF_PIG    (O19113), CTGF_RAT    (Q9R1E9), CYR61_CHICK (P19336), 
CYR61_HUMAN (O00622), CYR61_MOUSE (P18406), CYR61_PANTR (A5A6L1), 
CYR61_RAT   (Q9ES72), GPHA2_MOUSE (Q925Q5), GPHA2_RAT   (Q925Q4), 
HMCT_BOMMO  (P98092), MUC19_HUMAN (Q7Z5P9), MUC19_MOUSE (Q6PZE0), 
MUC2L_RAT   (P98089), MUC2_HUMAN  (Q02817), MUC2_MOUSE  (Q80Z19), 
MUC5A_HUMAN (P98088), MUC5B_HUMAN (Q9HC84), MUCAP_PIG   (P12021), 
MUCB1_XENLA (P38565), MUCS_BOVIN  (P98091), NDP_BOVIN   (Q2KI78), 
NDP_HUMAN   (Q00604), NDP_MACFA   (Q60HE4), NDP_MOUSE   (P48744), 
NOV_CHICK   (P28686), NOV_COTJA   (P42642), NOV_HUMAN   (P48745), 
NOV_MOUSE   (Q64299), NOV_RAT     (Q9QZQ5), SLIT1_HUMAN (O75093), 
SLIT1_MOUSE (Q80TR4), SLIT1_RAT   (O88279), SLIT2_HUMAN (O94813), 
SLIT2_MOUSE (Q9R1B9), SLIT3_HUMAN (O75094), SLIT3_MOUSE (Q9WVB4), 
SLIT3_RAT   (O88280), SLIT_DROME  (P24014), VWF_CANFA   (Q28295), 
VWF_HUMAN   (P04275), VWF_MOUSE   (Q8CIZ8), VWF_PIG     (Q28833), 
WISP1_HUMAN (O95388), WISP1_MOUSE (O54775), WISP1_RAT   (Q99PP0)
» More

UniProtKB/Swiss-Prot
False negative sequences
33 sequences

BURS_AEDAE  (P85316), BURS_ANOGA  (Q66Q82), BURS_APIME  (A2VB89), 
BURS_BOMMO  (Q566B1), BURS_CULPP  (P85315), BURS_DROME  (Q9VD83), 
BURS_MANSE  (Q4FCM6), CER1_CHICK  (Q9PWB0), CER1_HUMAN  (O95813), 
CER1_MOUSE  (O55233), CER1_XENLA  (P70041), CER1_XENTR  (Q07G34), 
NOV_XENLA   (P51609), PBURS_ANOGA (Q566B3), PBURS_APIME (A2VB90), 
PBURS_BOMMO (Q566B2), PBURS_DROME (Q9VJS7), SOSD1_CHICK (Q6VYA3), 
SOSD1_HUMAN (Q6X4U4), SOSD1_MOUSE (Q9CQN4), SOSD1_PONAB (Q5R5D2), 
SOSD1_RAT   (Q642G2), SOST_BOVIN  (Q9BG79), SOST_CHLAE  (Q9BG78), 
SOST_HUMAN  (Q9BQB4), SOST_MOUSE  (Q99P68), SOST_RAT    (Q99P67), 
SSPO_BOVIN  (P98167), SSPO_CHICK  (Q2PC93), SSPO_HUMAN  (A2VEC9), 
SSPO_MOUSE  (Q8CG65), SSPO_RAT    (Q700K0), WISP3_HUMAN (O95389)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

BURS_PERAM  (P84118), VWF_BOVIN   (P80012)

		
PDB
[Detailed view]
2 PDB

4MY2; 4NT5

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