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Entry: PS01200

General information about the entry

Entry name [info] TUB_1
Accession [info] PS01200
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED; 01-DEC-2001 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00923

Name and characterization of the entry

Description [info] Tub family signature 1.
Pattern [info]
F-[KRHQ]-G-R-V-[ST]-x-A-S-V-K-N-F-Q.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 48 in 48 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.12 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
48 sequences

TLP10_ARATH (Q9FRH7    ), TLP10_ORYSJ (Q688Y7    ), TLP11_ARATH (Q6NPQ1    ), 
TLP11_ORYSJ (Q8H485    ), TLP12_ORYSJ (Q69U54    ), TLP13_ORYSJ (Q53PP5    ), 
TLP14_ORYSJ (Q2QXB2    ), TLP1_ARATH  (Q9ZP59    ), TLP1_ORYSJ  (Q5QM27    ), 
TLP2_ARATH  (Q8GVE5    ), TLP3_ORYSJ  (Q8LJA9    ), TLP5_ARATH  (Q944S3    ), 
TLP5_ORYSJ  (Q6Z2G9    ), TLP6_ARATH  (Q0WPY0    ), TLP6_ORYSJ  (Q10LG8    ), 
TLP7_ARATH  (Q93VI8    ), TLP7_ORYSJ  (Q7XSV4    ), TLP8_ORYSJ  (Q75HX5    ), 
TLP9_ARATH  (Q9SQU1    ), TLP9_ORYSJ  (Q68Y48    ), TUB1_CAEBR  (A8WN62    ), 
TUB1_CAEEL  (Q09306    ), TUB_HUMAN   (P50607    ), TUB_MOUSE   (P50586    ), 
TUB_RAT     (O88808    ), TULP1_AEDAE (Q16KI5    ), TULP1_CULQU (B0XFQ9    ), 
TULP1_HUMAN (O00294    ), TULP1_MOUSE (Q9Z273    ), TULP2_AEDAE (Q16IR1    ), 
TULP2_CULQU (B0WI30    ), TULP2_HUMAN (O00295    ), TULP2_MOUSE (P46686    ), 
TULP3_HUMAN (O75386    ), TULP3_MOUSE (O88413    ), TULP_ANOGA  (Q7PZK5    ), 
TULP_DROAN  (B3MDU3    ), TULP_DROER  (B3NJY0    ), TULP_DROGR  (B4J6R7    ), 
TULP_DROME  (Q86PC9    ), TULP_DROMO  (B4KNA9    ), TULP_DROPE  (B4H4X0    ), 
TULP_DROPS  (Q28X18    ), TULP_DROSE  (B4I7J9    ), TULP_DROSI  (B4QFM2    ), 
TULP_DROVI  (B4LMR9    ), TULP_DROWI  (B4MKC7    ), TULP_DROYA  (B4P9H8    )
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

TLP2_ORYSJ  (Q94DT9    ), TLP3_ARATH  (Q8VY21    ), TLP4_ORYSJ  (Q6ETL2    )

		
PDB
[Detailed view]
5 PDB

1C8Z; 1I7E; 1S31; 2FIM; 3C5N

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