Entry: PS01200

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General information about the entry

Entry name [info] TUB_1
Accession [info] PS01200
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2001 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00923

Name and characterization of the entry

Description [info] Tub family signature 1.
Pattern [info]
F-[KRHQ]-G-R-V-[ST]-x-A-S-V-K-N-F-Q.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 48 in 48 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.12 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
48 sequences

TLP10_ARATH (Q9FRH7), TLP10_ORYSJ (Q688Y7), TLP11_ARATH (Q6NPQ1), 
TLP11_ORYSJ (Q8H485), TLP12_ORYSJ (Q69U54), TLP13_ORYSJ (Q53PP5), 
TLP14_ORYSJ (Q2QXB2), TLP1_ARATH  (Q9ZP59), TLP1_ORYSJ  (Q5QM27), 
TLP2_ARATH  (Q8GVE5), TLP3_ORYSJ  (Q8LJA9), TLP5_ARATH  (Q944S3), 
TLP5_ORYSJ  (Q6Z2G9), TLP6_ARATH  (Q0WPY0), TLP6_ORYSJ  (Q10LG8), 
TLP7_ARATH  (Q93VI8), TLP7_ORYSJ  (Q7XSV4), TLP8_ORYSJ  (Q75HX5), 
TLP9_ARATH  (Q9SQU1), TLP9_ORYSJ  (Q68Y48), TUB1_CAEBR  (A8WN62), 
TUB1_CAEEL  (Q09306), TUB_HUMAN   (P50607), TUB_MOUSE   (P50586), 
TUB_RAT     (O88808), TULP1_AEDAE (Q16KI5), TULP1_CULQU (B0XFQ9), 
TULP1_HUMAN (O00294), TULP1_MOUSE (Q9Z273), TULP2_AEDAE (Q16IR1), 
TULP2_CULQU (B0WI30), TULP2_HUMAN (O00295), TULP2_MOUSE (P46686), 
TULP3_HUMAN (O75386), TULP3_MOUSE (O88413), TULP_ANOGA  (Q7PZK5), 
TULP_DROAN  (B3MDU3), TULP_DROER  (B3NJY0), TULP_DROGR  (B4J6R7), 
TULP_DROME  (Q86PC9), TULP_DROMO  (B4KNA9), TULP_DROPE  (B4H4X0), 
TULP_DROPS  (Q28X18), TULP_DROSE  (B4I7J9), TULP_DROSI  (B4QFM2), 
TULP_DROVI  (B4LMR9), TULP_DROWI  (B4MKC7), TULP_DROYA  (B4P9H8)
» More

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

TLP2_ORYSJ  (Q94DT9), TLP3_ARATH  (Q8VY21), TLP4_ORYSJ  (Q6ETL2)

		
PDB
[Detailed view]
5 PDB

1C8Z; 1I7E; 1S31; 2FIM; 3C5N

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