Entry: PS01204

General information about the entry

Entry name [info] REL_1
Accession [info] PS01204
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2001 (DATA UPDATE); MAR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00924

Name and characterization of the entry

Description [info] NF-kappa-B/Rel/dorsal domain signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_05 which contains 548'454 sequence entries.

Total number of hits 23 in 23 different sequences
Number of true positive hits 23 in 23 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 13
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 63.89 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
23 sequences

DIF_DROME   (P98149), DORS_DROME  (P15330), NFKB1_CANFA (Q6F3J0), 
NFKB1_CHICK (Q04861), NFKB1_HUMAN (P19838), NFKB1_MOUSE (P25799), 
NFKB2_CHICK (P98150), NFKB2_HUMAN (Q00653), NFKB2_MOUSE (Q9WTK5), 
NFKB2_XENLA (O73630), RELB_CHICK  (P51509), RELB_HUMAN  (Q01201), 
RELB_MOUSE  (Q04863), RELB_XENLA  (P51510), REL_AVIRE   (P01126), 
REL_CHICK   (P16236), REL_HUMAN   (Q04864), REL_MELGA   (P01125), 
REL_MOUSE   (P15307), TF65_CHICK  (P98152), TF65_HUMAN  (Q04206), 
TF65_MOUSE  (Q04207), TF65_XENLA  (Q04865)
» More

False negative sequences
13 sequences

NFAC1_BOVIN (P98201), NFAC1_HUMAN (O95644), NFAC1_MOUSE (O88942), 
NFAC1_PIG   (O77638), NFAC2_HUMAN (Q13469), NFAC2_MOUSE (Q60591), 
NFAC3_HUMAN (Q12968), NFAC3_MOUSE (P97305), NFAC4_HUMAN (Q14934), 
NFAC4_MOUSE (Q8K120), NFAT5_HUMAN (O94916), NFAT5_MOUSE (Q9WV30), 
NFKB1_DROME (Q94527)
» More

'Partial' sequences
1 sequence

NFKB1_RAT   (Q63369)

[Detailed view]
20 PDB

1A3Q; 1GJI; 1IKN; 1LE5; 1LE9; 1LEI; 1MDI; 1MDJ; 1MDK; 1NFI; 1NFK; 1OOA; 1RAM; 1VKX; 2I9T; 2O61; 2RAM; 2V2T; 3DO7; 3GUT
» More

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