Entry: PS01204

General information about the entry

Entry name [info] REL_1
Accession [info] PS01204
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2001 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00924

Name and characterization of the entry

Description [info] NF-kappa-B/Rel/dorsal domain signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 23 in 23 different sequences
Number of true positive hits 23 in 23 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 13
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 63.89 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
23 sequences

DIF_DROME   (P98149), DORS_DROME  (P15330), NFKB1_CANLF (Q6F3J0), 
NFKB1_CHICK (Q04861), NFKB1_HUMAN (P19838), NFKB1_MOUSE (P25799), 
NFKB2_CHICK (P98150), NFKB2_HUMAN (Q00653), NFKB2_MOUSE (Q9WTK5), 
NFKB2_XENLA (O73630), RELB_CHICK  (P51509), RELB_HUMAN  (Q01201), 
RELB_MOUSE  (Q04863), RELB_XENLA  (P51510), REL_AVIRE   (P01126), 
REL_CHICK   (P16236), REL_HUMAN   (Q04864), REL_MELGA   (P01125), 
REL_MOUSE   (P15307), TF65_CHICK  (P98152), TF65_HUMAN  (Q04206), 
TF65_MOUSE  (Q04207), TF65_XENLA  (Q04865)
» more

False negative sequences
13 sequences

NFAC1_BOVIN (P98201), NFAC1_HUMAN (O95644), NFAC1_MOUSE (O88942), 
NFAC1_PIG   (O77638), NFAC2_HUMAN (Q13469), NFAC2_MOUSE (Q60591), 
NFAC3_HUMAN (Q12968), NFAC3_MOUSE (P97305), NFAC4_HUMAN (Q14934), 
NFAC4_MOUSE (Q8K120), NFAT5_HUMAN (O94916), NFAT5_MOUSE (Q9WV30), 
NFKB1_DROME (Q94527)
» more

'Partial' sequences
1 sequence

NFKB1_RAT   (Q63369)

[Detailed view]
20 PDB

1A3Q; 1GJI; 1IKN; 1LE5; 1LE9; 1LEI; 1MDI; 1MDJ; 1MDK; 1NFI; 1NFK; 1OOA; 1RAM; 1VKX; 2I9T; 2O61; 2RAM; 2V2T; 3DO7; 3GUT
» more

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