Entry: PS01206

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General information about the entry

Entry name [info] ASC
Accession [info] PS01206
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00926

Name and characterization of the entry

Description [info] Amiloride-sensitive sodium channels signature.
Pattern [info]
Y-x(2)-[EQTFPMSI]-x-C-x(3)-C-x-[QTAVKS]-x(2)-[LIVMT]-[LIVMSAQ]-x(2)-C-x-
C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 58 in 58 different sequences
Number of true positive hits 58 in 58 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 6
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 90.62 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
58 sequences

ASI1A_DANRE (Q708S8), ASI1B_DANRE (Q708S7), ASI1C_DANRE (Q708S6), 
ASI4A_DANRE (Q708S4), ASI4B_DANRE (Q708S3), ASIC1_CAEEL (O01635), 
ASIC1_CHICK (Q1XA76), ASIC1_HUMAN (P78348), ASIC1_MOUSE (Q6NXK8), 
ASIC1_OPSTA (Q7T1N4), ASIC1_RAT   (P55926), ASIC2_CAEEL (Q22851), 
ASIC2_DANRE (Q708S5), ASIC2_HUMAN (Q16515), ASIC2_MOUSE (Q925H0), 
ASIC2_RAT   (Q62962), ASIC3_HUMAN (Q9UHC3), ASIC3_MOUSE (Q6X1Y6), 
ASIC3_RAT   (O35240), ASIC4_HUMAN (Q96FT7), ASIC4_MOUSE (Q7TNS7), 
ASIC4_RAT   (Q9JHS6), DEG1_CAEEL  (P24585), DEL1_CAEEL  (Q19038), 
FANA_HELAS  (Q25011), MEC10_CAEBR (Q60NC0), MEC10_CAEEL (P34886), 
MEC4_CAEBR  (Q17298), MEC4_CAEEL  (P24612), NACH_DROAN  (O61370), 
NACH_DROME  (O61365), NACH_DROVI  (Q9NJP2), PPK11_DROME (Q9VL84), 
SCNNA_BOVIN (P55270), SCNNA_CAVPO (Q9R1N2), SCNNA_CHICK (Q92075), 
SCNNA_HUMAN (P37088), SCNNA_MOUSE (Q61180), SCNNA_RABIT (O97741), 
SCNNA_RAT   (P37089), SCNNA_XENLA (P51167), SCNNB_HUMAN (P51168), 
SCNNB_LITCT (Q9W754), SCNNB_MOUSE (Q9WU38), SCNNB_RABIT (O97742), 
SCNNB_RAT   (P37090), SCNNB_XENLA (P51169), SCNNC_XENLA (O13262), 
SCNND_HUMAN (P51172), SCNND_PANTR (O46547), SCNNG_HUMAN (P51170), 
SCNNG_MOUSE (Q9WU39), SCNNG_RABIT (Q28738), SCNNG_RAT   (P37091), 
SCNNG_XENLA (P51171), SCNNH_XENLA (O13263), UN105_CAEEL (Q09274), 
UNC8_CAEEL  (Q21974)
» More

UniProtKB/Swiss-Prot
False negative sequences
6 sequences

ASIC5_HUMAN (Q9NY37), ASIC5_MOUSE (Q9R0Y1), ASIC5_RAT   (Q9R0W5), 
DEGZ_CAEEL  (Q10025), PPK19_DROME (Q9VAJ3), PPK28_DROME (Q86LG1)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

SCNNB_CANFA (Q95165), SCNNB_SHEEP (O62816)

		
PDB
[Detailed view]
10 PDB

2QTS; 3IJ4; 3S3W; 3S3X; 4FZ0; 4FZ1; 4NTW; 4NTX; 4NTY; 4NYK

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