Entry: PS01207

Forthcoming changes to the profile format
General information about the entry

Entry name [info] GLYPICAN
Accession [info] PS01207
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); APR-2006 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00927

Name and characterization of the entry

Description [info] Glypicans signature.
Pattern [info]
C-x(2)-C-x-[GS]-[LIVM]-x(4)-P-C-x(2)-[FY]-C-x(2)-[LIVM]-x(2)-G-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 20 in 20 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.24 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
20 sequences

GPC1_BOVIN  (G3X745), GPC1_CHICK  (P50593), GPC1_DANRE  (F1QCC6), 
GPC1_HUMAN  (P35052), GPC1_MOUSE  (Q9QZF2), GPC1_RAT    (P35053), 
GPC2_HUMAN  (Q8N158), GPC2_MOUSE  (Q8BKV1), GPC2_RAT    (P51653), 
GPC3_HUMAN  (P51654), GPC3_MOUSE  (Q8CFZ4), GPC3_PANTR  (A5A6P7), 
GPC3_RAT    (P13265), GPC4_HUMAN  (O75487), GPC4_MOUSE  (P51655), 
GPC5_HUMAN  (P78333), GPC5_MOUSE  (Q8CAL5), GPC6_HUMAN  (Q9Y625), 
GPC6_MOUSE  (Q9R087), GPC6_PONAB  (Q5RE54)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

DALY_DROME  (Q24114)

		
PDB
[Detailed view]
3 PDB

4ACR; 4AD7; 4BWE

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission