Entry: PS01208

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General information about the entry

Entry name [info] VWFC_1
Accession [info] PS01208
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00928

Name and characterization of the entry

Description [info] VWFC domain signature.
Pattern [info]
C-x(2,3)-C-{CG}-C-x(6,14)-C-x(3,4)-C-x(2,10)-C-x(9,16)-C-C-x(2,4)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 266 in 135 different sequences
Number of true positive hits 248 in 120 different sequences
Number of 'unknown' hits
Number of false positive hits 18 in 15 different sequences
Number of false negative sequences 19
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 93.23 %
Recall (true positives / (true positives + false negatives)) 92.88 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 20
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
120 sequences

BMPER_HUMAN (Q8N8U9), BMPER_MOUSE (Q8CJ69), CHRD_DANRE  (O57472), 
CHRD_HUMAN  (Q9H2X0), CHRD_MOUSE  (Q9Z0E2), CHRD_RAT    (Q63148), 
CHRD_XENLA  (Q91713), CO1A1_BOVIN (P02453), CO1A1_CANFA (Q9XSJ7), 
CO1A1_CHICK (P02457), CO1A1_CYNPY (Q9YIB4), CO1A1_HUMAN (P02452), 
CO1A1_MOUSE (P11087), CO1A1_RAT   (P02454), CO2A1_BOVIN (P02459), 
CO2A1_HUMAN (P02458), CO2A1_MOUSE (P28481), CO2A1_XENLA (Q91717), 
CO2A1_XENTR (Q6P4Z2), CO3A1_CHICK (P12105), CO3A1_HUMAN (P02461), 
CO3A1_MOUSE (P08121), CO3A1_RAT   (P13941), CO5A2_HUMAN (P05997), 
CO5A2_MOUSE (Q3U962), CRDL1_CHICK (Q90ZD5), CRDL1_HUMAN (Q9BU40), 
CRDL1_MOUSE (Q920C1), CRDL1_RAT   (Q76LD0), CRDL2_HUMAN (Q6WN34), 
CRDL2_MOUSE (Q8VEA6), CRIM1_CHICK (Q8AWW5), CRIM1_DANRE (Q7T3Q2), 
CRIM1_HUMAN (Q9NZV1), CRIM1_MOUSE (Q9JLL0), CTGF_BOVIN  (O18739), 
CTGF_HUMAN  (P29279), CTGF_MOUSE  (P29268), CTGF_PIG    (O19113), 
CTGF_RAT    (Q9R1E9), CYR61_CHICK (P19336), CYR61_HUMAN (O00622), 
CYR61_MOUSE (P18406), CYR61_PANTR (A5A6L1), CYR61_RAT   (Q9ES72), 
ECM2_BOVIN  (Q3MHH9), ECM2_HUMAN  (O94769), ECM2_MOUSE  (Q5FW85), 
FRAS1_HUMAN (Q86XX4), FRAS1_MOUSE (Q80T14), IDD_HUMAN   (P98153), 
IDD_MOUSE   (P98154), KCP_HUMAN   (Q6ZWJ8), KCP_MOUSE   (Q3U492), 
KCP_XENLA   (Q9IBG7), MUC19_MOUSE (Q6PZE0), MUC2L_RAT   (P98089), 
MUC2_HUMAN  (Q02817), MUC2_MOUSE  (Q80Z19), MUC5A_HUMAN (P98088), 
MUC5B_CHICK (Q98UI9), MUC5B_HUMAN (Q9HC84), MUCAP_PIG   (P12021), 
MUCB1_XENLA (P38565), MUCS_BOVIN  (P98091), NELL1_HUMAN (Q92832), 
NELL1_MOUSE (Q2VWQ2), NELL1_RAT   (Q62919), NELL2_BOVIN (A6QR11), 
NELL2_DANRE (A1A5Y0), NELL2_HUMAN (Q99435), NELL2_MOUSE (Q61220), 
NELL2_PONAB (Q5R3Z7), NELL2_RAT   (Q62918), NELL2_XENLA (Q7ZXL5), 
NELL2_XENTR (A2VCU8), NEL_CHICK   (Q90827), NOV_CHICK   (P28686), 
NOV_COTJA   (P42642), NOV_HUMAN   (P48745), NOV_MOUSE   (Q64299), 
NOV_RAT     (Q9QZQ5), NOV_XENLA   (P51609), PXDNL_HUMAN (A1KZ92), 
PXDN_DROME  (Q9VZZ4), PXDN_HUMAN  (Q92626), PXDN_MOUSE  (Q3UQ28), 
PXDN_XENTR  (A4IGL7), SAS_DROME   (Q04164), SOG_DROME   (Q24025), 
SSPO_BOVIN  (P98167), SSPO_CHICK  (Q2PC93), SSPO_HUMAN  (A2VEC9), 
SSPO_MOUSE  (Q8CG65), SSPO_RAT    (Q700K0), TSP1_BOVIN  (Q28178), 
TSP1_HUMAN  (P07996), TSP1_MOUSE  (P35441), TSP1_XENLA  (P35448), 
TSP2_BOVIN  (Q95116), TSP2_CHICK  (P35440), TSP2_HUMAN  (P35442), 
TSP2_MOUSE  (Q03350), VWC2L_DANRE (B0UZC8), VWC2L_HUMAN (B2RUY7), 
VWC2L_MOUSE (Q505H4), VWC2_HUMAN  (Q2TAL6), VWC2_MOUSE  (Q8C8N3), 
VWCE_HUMAN  (Q96DN2), VWCE_MOUSE  (Q3U515), VWF_CANFA   (Q28295), 
VWF_HUMAN   (P04275), VWF_MOUSE   (Q8CIZ8), VWF_PIG     (Q28833), 
WISP1_HUMAN (O95388), WISP1_MOUSE (O54775), WISP1_RAT   (Q99PP0), 
WISP2_HUMAN (O76076), WISP2_MOUSE (Q9Z0G4), WISP2_RAT   (Q9JHC6)
» More

UniProtKB/Swiss-Prot
False negative sequences
19 sequences

AMNLS_CANFA (Q6UKI2), AMNLS_HUMAN (Q9BXJ7), AMNLS_MOUSE (Q99JB7), 
FSTL1_BOVIN (Q58D84), FSTL1_HUMAN (Q12841), FSTL1_MACFA (Q9GKY0), 
FSTL1_MOUSE (Q62356), FSTL1_PONAB (Q5R9Y1), FSTL1_RAT   (Q62632), 
HMCT_BOMMO  (P98092), JAG1B_DANRE (Q90Y54), JAG2_HUMAN  (Q9Y219), 
MUC19_HUMAN (Q7Z5P9), MUC2_RAT    (Q62635), VWC2L_MACFA (Q95K75), 
ZAN_HUMAN   (Q9Y493), ZAN_MOUSE   (O88799), ZAN_PIG     (Q28983), 
ZAN_RABIT   (P57999)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

CO1A1_RABIT (P02456), CO2A1_CHICK (P02460), CO3A1_BOVIN (P04258), 
VWF_BOVIN   (P80012)
» More

UniProtKB/Swiss-Prot
False positive sequences
15 sequences

GG3_ARATH   (Q6AWT8), KR510_HUMAN (Q6L8G5), KRA51_HUMAN (Q6L8H4), 
KRA51_MOUSE (Q64507), KRA53_HUMAN (Q6L8H2), KRA54_HUMAN (Q6L8H1), 
KRA56_HUMAN (Q6L8G9), KRA57_HUMAN (Q6L8G8), KRA58_HUMAN (O75690), 
KRA59_HUMAN (P26371), KRUC_SHEEP  (P26372), MCSP_MOUSE  (P15265), 
MCSP_RAT    (Q64298), MTCU_CALSI  (Q9U620), MT_CARMA    (P55948)
» More

PDB
[Detailed view]
1 PDB

1U5M

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