Entry: PS01208

General information about the entry

Entry name [info] VWFC_1
Accession [info] PS01208
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00928

Name and characterization of the entry

Description [info] VWFC domain signature.
Pattern [info]
C-x(2,3)-C-{CG}-C-x(6,14)-C-x(3,4)-C-x(2,10)-C-x(9,16)-C-C-x(2,4)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 266 in 135 different sequences
Number of true positive hits 248 in 120 different sequences
Number of 'unknown' hits 0
Number of false positive hits 18 in 15 different sequences
Number of false negative sequences 19
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 93.23 %
Recall (true positives / (true positives + false negatives)) 92.88 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 20
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
120 sequences

BMPER_HUMAN (Q8N8U9    ), BMPER_MOUSE (Q8CJ69    ), CHRD_DANRE  (O57472    ), 
CHRD_HUMAN  (Q9H2X0    ), CHRD_MOUSE  (Q9Z0E2    ), CHRD_RAT    (Q63148    ), 
CHRD_XENLA  (Q91713    ), CO1A1_BOVIN (P02453    ), CO1A1_CANLF (Q9XSJ7    ), 
CO1A1_CHICK (P02457    ), CO1A1_CYNPY (Q9YIB4    ), CO1A1_HUMAN (P02452    ), 
CO1A1_MOUSE (P11087    ), CO1A1_RAT   (P02454    ), CO2A1_BOVIN (P02459    ), 
CO2A1_HUMAN (P02458    ), CO2A1_MOUSE (P28481    ), CO2A1_XENLA (Q91717    ), 
CO2A1_XENTR (Q6P4Z2    ), CO3A1_CHICK (P12105    ), CO3A1_HUMAN (P02461    ), 
CO3A1_MOUSE (P08121    ), CO3A1_RAT   (P13941    ), CO5A2_HUMAN (P05997    ), 
CO5A2_MOUSE (Q3U962    ), CRDL1_CHICK (Q90ZD5    ), CRDL1_HUMAN (Q9BU40    ), 
CRDL1_MOUSE (Q920C1    ), CRDL1_RAT   (Q76LD0    ), CRDL2_HUMAN (Q6WN34    ), 
CRDL2_MOUSE (Q8VEA6    ), CRIM1_CHICK (Q8AWW5    ), CRIM1_DANRE (Q7T3Q2    ), 
CRIM1_HUMAN (Q9NZV1    ), CRIM1_MOUSE (Q9JLL0    ), CTGF_BOVIN  (O18739    ), 
CTGF_HUMAN  (P29279    ), CTGF_MOUSE  (P29268    ), CTGF_PIG    (O19113    ), 
CTGF_RAT    (Q9R1E9    ), CYR61_CHICK (P19336    ), CYR61_HUMAN (O00622    ), 
CYR61_MOUSE (P18406    ), CYR61_PANTR (A5A6L1    ), CYR61_RAT   (Q9ES72    ), 
ECM2_BOVIN  (Q3MHH9    ), ECM2_HUMAN  (O94769    ), ECM2_MOUSE  (Q5FW85    ), 
FRAS1_HUMAN (Q86XX4    ), FRAS1_MOUSE (Q80T14    ), IDD_HUMAN   (P98153    ), 
IDD_MOUSE   (P98154    ), KCP_HUMAN   (Q6ZWJ8    ), KCP_MOUSE   (Q3U492    ), 
KCP_XENLA   (Q9IBG7    ), MUC19_MOUSE (Q6PZE0    ), MUC2L_RAT   (P98089    ), 
MUC2_HUMAN  (Q02817    ), MUC2_MOUSE  (Q80Z19    ), MUC5A_HUMAN (P98088    ), 
MUC5B_CHICK (Q98UI9    ), MUC5B_HUMAN (Q9HC84    ), MUCAP_PIG   (P12021    ), 
MUCB1_XENLA (P38565    ), MUCS_BOVIN  (P98091    ), NELL1_HUMAN (Q92832    ), 
NELL1_MOUSE (Q2VWQ2    ), NELL1_RAT   (Q62919    ), NELL2_BOVIN (A6QR11    ), 
NELL2_DANRE (A1A5Y0    ), NELL2_HUMAN (Q99435    ), NELL2_MOUSE (Q61220    ), 
NELL2_PONAB (Q5R3Z7    ), NELL2_RAT   (Q62918    ), NELL2_XENLA (Q7ZXL5    ), 
NELL2_XENTR (A2VCU8    ), NEL_CHICK   (Q90827    ), NOV_CHICK   (P28686    ), 
NOV_COTJA   (P42642    ), NOV_HUMAN   (P48745    ), NOV_MOUSE   (Q64299    ), 
NOV_RAT     (Q9QZQ5    ), NOV_XENLA   (P51609    ), PXDNL_HUMAN (A1KZ92    ), 
PXDN_DROME  (Q9VZZ4    ), PXDN_HUMAN  (Q92626    ), PXDN_MOUSE  (Q3UQ28    ), 
PXDN_XENTR  (A4IGL7    ), SAS_DROME   (Q04164    ), SOG_DROME   (Q24025    ), 
SSPO_BOVIN  (P98167    ), SSPO_CHICK  (Q2PC93    ), SSPO_HUMAN  (A2VEC9    ), 
SSPO_MOUSE  (Q8CG65    ), SSPO_RAT    (Q700K0    ), TSP1_BOVIN  (Q28178    ), 
TSP1_HUMAN  (P07996    ), TSP1_MOUSE  (P35441    ), TSP1_XENLA  (P35448    ), 
TSP2_BOVIN  (Q95116    ), TSP2_CHICK  (P35440    ), TSP2_HUMAN  (P35442    ), 
TSP2_MOUSE  (Q03350    ), VWC2L_DANRE (B0UZC8    ), VWC2L_HUMAN (B2RUY7    ), 
VWC2L_MOUSE (Q505H4    ), VWC2_HUMAN  (Q2TAL6    ), VWC2_MOUSE  (Q8C8N3    ), 
VWCE_HUMAN  (Q96DN2    ), VWCE_MOUSE  (Q3U515    ), VWF_CANLF   (Q28295    ), 
VWF_HUMAN   (P04275    ), VWF_MOUSE   (Q8CIZ8    ), VWF_PIG     (Q28833    ), 
WISP1_HUMAN (O95388    ), WISP1_MOUSE (O54775    ), WISP1_RAT   (Q99PP0    ), 
WISP2_HUMAN (O76076    ), WISP2_MOUSE (Q9Z0G4    ), WISP2_RAT   (Q9JHC6    )
» more

UniProtKB/Swiss-Prot
False negative sequences
19 sequences

AMNLS_CANLF (Q6UKI2    ), AMNLS_HUMAN (Q9BXJ7    ), AMNLS_MOUSE (Q99JB7    ), 
FSTL1_BOVIN (Q58D84    ), FSTL1_HUMAN (Q12841    ), FSTL1_MACFA (Q9GKY0    ), 
FSTL1_MOUSE (Q62356    ), FSTL1_PONAB (Q5R9Y1    ), FSTL1_RAT   (Q62632    ), 
HMCT_BOMMO  (P98092    ), JAG1B_DANRE (Q90Y54    ), JAG2_HUMAN  (Q9Y219    ), 
MUC19_HUMAN (Q7Z5P9    ), MUC2_RAT    (Q62635    ), VWC2L_MACFA (Q95K75    ), 
ZAN_HUMAN   (Q9Y493    ), ZAN_MOUSE   (O88799    ), ZAN_PIG     (Q28983    ), 
ZAN_RABIT   (P57999    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

CO1A1_RABIT (P02456    ), CO2A1_CHICK (P02460    ), CO3A1_BOVIN (P04258    ), 
VWF_BOVIN   (P80012    )
» more

UniProtKB/Swiss-Prot
False positive sequences
15 sequences

GG3_ARATH   (Q6AWT8    ), KR510_HUMAN (Q6L8G5    ), KRA51_HUMAN (Q6L8H4    ), 
KRA51_MOUSE (Q64507    ), KRA53_HUMAN (Q6L8H2    ), KRA54_HUMAN (Q6L8H1    ), 
KRA56_HUMAN (Q6L8G9    ), KRA57_HUMAN (Q6L8G8    ), KRA58_HUMAN (O75690    ), 
KRA59_HUMAN (P26371    ), KRUC_SHEEP  (P26372    ), MCSP_MOUSE  (P15265    ), 
MCSP_RAT    (Q64298    ), MTCU_CALSI  (Q9U620    ), MT_CARMA    (P55948    )
» more

PDB
[Detailed view]
1 PDB

1U5M

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