Entry: PS01216

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General information about the entry

Entry name [info] SUCCINYL_COA_LIG_1
Accession [info] PS01216
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00335

Name and characterization of the entry

Description [info] ATP-citrate lyase / succinyl-CoA ligases family signature 1.
Pattern [info]
S-[KR]-S-G-[GT]-[LIVM]-[GST]-x-[EQ]-x(8,10)-G-x(4)-[LIVM]-[GA]-[LIVM]-G-
G-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 63 in 63 different sequences
Number of true positive hits 63 in 63 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 8
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 88.73 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
63 sequences

ACL1_NEUCR  (Q8X097), ACL1_SCHPO  (Q9P7W3), ACL1_SORMK  (O93988), 
ACLB1_ARATH (Q9C522), ACLB1_ORYSJ (Q93VT8), ACLB2_ARATH (Q9FGX1), 
ACLY_BOVIN  (Q32PF2), ACLY_CAEEL  (P53585), ACLY_DICDI  (Q54YA0), 
ACLY_HUMAN  (P53396), ACLY_MOUSE  (Q91V92), ACLY_RAT    (P16638), 
ACLY_SHEEP  (Q2TCH3), MTKB_METEA  (P53595), SUCA1_ARATH (P68209), 
SUCA1_SOLLC (Q8GTQ9), SUCA1_TRIVA (P53399), SUCA2_ARATH (Q8LAD2), 
SUCA2_SOLLC (Q6DQL1), SUCA2_TRIVA (P53400), SUCA3_TRIVA (P53401), 
SUCA_BOVIN  (Q58DR8), SUCA_CAEEL  (P53596), SUCA_COLLI  (Q9YGD2), 
SUCA_DICDI  (P36967), SUCA_DROME  (Q94522), SUCA_HUMAN  (P53597), 
SUCA_MOUSE  (Q9WUM5), SUCA_NEUCR  (Q9P727), SUCA_ORYSJ  (Q6ZL94), 
SUCA_PIG    (O19069), SUCA_RAT    (P13086), SUCA_SCHPO  (O13750), 
SUCA_YEAST  (P53598), SUCD1_ARCFU (O28733), SUCD2_ARCFU (O28098), 
SUCD_AQUAE  (O67547), SUCD_BACSU  (P80865), SUCD_COXBU  (P53591), 
SUCD_ECO57  (P0AGF1), SUCD_ECOL6  (P0AGF0), SUCD_ECOLI  (P0AGE9), 
SUCD_HAEIN  (P45102), SUCD_METJA  (Q58643), SUCD_METTH  (O26663), 
SUCD_MYCBO  (Q7U0Z0), SUCD_MYCTO  (P9WGC6), SUCD_MYCTU  (P9WGC7), 
SUCD_PSEAE  (Q51567), SUCD_RICBR  (Q1RH56), SUCD_RICCN  (Q92I22), 
SUCD_RICFE  (Q4ULQ8), SUCD_RICPR  (O08371), SUCD_RICTY  (Q9AKE1), 
SUCD_STAAC  (Q5HGI6), SUCD_STAAM  (P66866), SUCD_STAAN  (P99070), 
SUCD_STAAR  (Q6GHI9), SUCD_STAAS  (Q6G9W7), SUCD_STAAW  (Q8NX01), 
SUCD_STAEQ  (Q5HPU4), SUCD_STAES  (Q8CPH4), SUCD_THETH  (P09143)
» More

UniProtKB/Swiss-Prot
False negative sequences
8 sequences

ACL2_SCHPO  (O13907), ACLA1_ARATH (Q9SGY2), ACLA1_ORYSJ (Q53JY8), 
ACLA2_ARATH (O22718), ACLA2_ORYSJ (Q2QZ86), ACLA3_ARATH (O80526), 
ACLA3_ORYSJ (Q2QNG7), SUCB_SOLLC  (Q84LB6)
» More

PDB
[Detailed view]
22 PDB

1CQI; 1CQJ; 1EUC; 1EUD; 1JKJ; 1JLL; 1OI7; 1SCU; 2FP4; 2FPG; 2FPI; 2FPP; 2NU6; 2NU7; 2NU8; 2NU9; 2NUA; 2SCU; 2YV1; 3MWE; 3PFF; 3UFX
» More

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