Entry: PS01221

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General information about the entry

Entry name [info] PMP22_1
Accession [info] PS01221
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00939

Name and characterization of the entry

Description [info] PMP-22 / EMP / MP20 family signature 1.
Pattern [info]
[LIVMF]-[LIVMFC]-[LIVMF](2)-[SA]-[TL]-x(2)-[DNKS]-x-W-x(9,13)-[LIV]-W-
x(2)-[CG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 24 in 24 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 68.57 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
24 sequences

CLDN2_HUMAN (Q8NHS1), EMP1_HUMAN  (P54849), EMP1_MOUSE  (P47801), 
EMP1_PONAB  (Q5RCY3), EMP1_RABIT  (P54850), EMP1_RAT    (P54848), 
EMP2_BOVIN  (Q2NKU9), EMP2_HUMAN  (P54851), EMP2_MOUSE  (O88662), 
EMP2_PANTR  (A5A6N6), EMP3_BOVIN  (Q58DR6), EMP3_HUMAN  (P54852), 
EMP3_MOUSE  (O35912), EMP3_RAT    (Q9QYW5), LMIP_BOVIN  (P20274), 
LMIP_MOUSE  (P56563), LMIP_RAT    (P54825), NKG7_HUMAN  (Q16617), 
PMP22_BOVIN (Q9TQZ3), PMP22_HORSE (Q6WL85), PMP22_HUMAN (Q01453), 
PMP22_MOUSE (P16646), PMP22_PONAB (Q5RAZ3), PMP22_RAT   (P25094)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

CCGL_HUMAN  (Q8WXS4), CCGL_MOUSE  (Q9JJV3), CCGL_RAT    (Q8VHW1), 
CLDN2_MOUSE (Q9D9H2), LMIP_HUMAN  (P55344), NKG7_BOVIN  (Q2KJ11), 
NKG7_MOUSE  (Q99PA5), TM114_HUMAN (B3SHH9), TM114_MOUSE (Q9D563), 
TM235_HUMAN (A6NFC5), TM235_MOUSE (B1AQL3)
» More


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