Entry: PS01221

General information about the entry

Entry name [info] PMP22_1
Accession [info] PS01221
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00939

Name and characterization of the entry

Description [info] PMP-22 / EMP / MP20 family signature 1.
Pattern [info]
[LIVMF]-[LIVMFC]-[LIVMF](2)-[SA]-[TL]-x(2)-[DNKS]-x-W-x(9,13)-[LIV]-W-
x(2)-[CG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 26 in 26 different sequences
Number of true positive hits 26 in 26 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.27 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
26 sequences

CLDN2_HUMAN (Q8NHS1), EMP1_HUMAN  (P54849), EMP1_MOUSE  (P47801), 
EMP1_PONAB  (Q5RCY3), EMP1_RABIT  (P54850), EMP1_RAT    (P54848), 
EMP2_BOVIN  (Q2NKU9), EMP2_DANRE  (F1QIK8), EMP2_HUMAN  (P54851), 
EMP2_MOUSE  (O88662), EMP2_PANTR  (A5A6N6), EMP2_RAT    (Q66HH2), 
EMP3_BOVIN  (Q58DR6), EMP3_HUMAN  (P54852), EMP3_MOUSE  (O35912), 
EMP3_RAT    (Q9QYW5), LMIP_BOVIN  (P20274), LMIP_MOUSE  (P56563), 
LMIP_RAT    (P54825), NKG7_HUMAN  (Q16617), PMP22_BOVIN (Q9TQZ3), 
PMP22_HORSE (Q6WL85), PMP22_HUMAN (Q01453), PMP22_MOUSE (P16646), 
PMP22_PONAB (Q5RAZ3), PMP22_RAT   (P25094)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

CCGL_HUMAN  (Q8WXS4), CCGL_MOUSE  (Q9JJV3), CCGL_RAT    (Q8VHW1), 
CLDN2_MOUSE (Q9D9H2), LMIP_HUMAN  (P55344), NKG7_BOVIN  (Q2KJ11), 
NKG7_MOUSE  (Q99PA5), TM114_HUMAN (B3SHH9), TM114_MOUSE (Q9D563), 
TM235_HUMAN (A6NFC5), TM235_MOUSE (B1AQL3)
» More


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