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Entry: PS01222

General information about the entry

Entry name [info] PMP22_2
Accession [info] PS01222
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED; 01-DEC-2004 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00939

Name and characterization of the entry

Description [info] PMP-22 / EMP / MP20 family signature 2.
Pattern [info]
[RQ]-[AVS]-x-[MC]-[IV]-L-[SA]-x-[LI]-x(4)-[GSA]-[LIVMF]-[LIVMFS]-[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 26 in 26 different sequences
Number of true positive hits 26 in 26 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.27 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
26 sequences

EMP1_HUMAN  (P54849    ), EMP1_MOUSE  (P47801    ), EMP1_PONAB  (Q5RCY3    ), 
EMP1_RABIT  (P54850    ), EMP1_RAT    (P54848    ), EMP2_BOVIN  (Q2NKU9    ), 
EMP2_DANRE  (F1QIK8    ), EMP2_HUMAN  (P54851    ), EMP2_MOUSE  (O88662    ), 
EMP2_PANTR  (A5A6N6    ), EMP2_RAT    (Q66HH2    ), EMP3_BOVIN  (Q58DR6    ), 
EMP3_HUMAN  (P54852    ), EMP3_MOUSE  (O35912    ), EMP3_RAT    (Q9QYW5    ), 
LMIP_BOVIN  (P20274    ), LMIP_HUMAN  (P55344    ), LMIP_MOUSE  (P56563    ), 
LMIP_RAT    (P54825    ), NKG7_MOUSE  (Q99PA5    ), PMP22_BOVIN (Q9TQZ3    ), 
PMP22_HORSE (Q6WL85    ), PMP22_HUMAN (Q01453    ), PMP22_MOUSE (P16646    ), 
PMP22_PONAB (Q5RAZ3    ), PMP22_RAT   (P25094    )
» more

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

CCGL_HUMAN  (Q8WXS4    ), CCGL_MOUSE  (Q9JJV3    ), CCGL_RAT    (Q8VHW1    ), 
CLDN2_HUMAN (Q8NHS1    ), CLDN2_MOUSE (Q9D9H2    ), NKG7_BOVIN  (Q2KJ11    ), 
NKG7_HUMAN  (Q16617    ), TM114_HUMAN (B3SHH9    ), TM114_MOUSE (Q9D563    ), 
TM235_HUMAN (A6NFC5    ), TM235_MOUSE (B1AQL3    )
» more


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