Entry: PS01235

General information about the entry

Entry name [info] PDXS_SNZ_1
Accession [info] PS01235
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); FEB-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00949

Name and characterization of the entry

Description [info] PdxS/SNZ family signature.
Pattern [info]
[LV]-P-[VI]-[VTPI]-[NQLHT]-[FL]-[ATVS]-[AS]-G-G-[LIV]-[AT]-T-P-[AQS]-D-
[AGVS]-[AS]-[LM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_04 which contains 548'208 sequence entries.


Total number of hits 206 in 206 different sequences
Number of true positive hits 206 in 206 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 4
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.10 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
206 sequences

PDX11_ARATH (O80448), PDX11_ORYSJ (Q69LA6), PDX12_ARATH (Q9ZNR6), 
PDX12_ORYSJ (Q8W3D0), PDX13_ARATH (Q8L940), PDX1_CERNC  (O59905), 
PDX1_DICDI  (Q54J47), PDX1_EMENI  (Q9UW83), PDX1_GINBI  (Q9AT63), 
PDX1_HEVBR  (Q39963), PDX1_NEUCR  (Q9C1K6), PDX1_PHAVU  (Q9FT25), 
PDX1_PLABE  (P0DMS0), PDX1_PLAF7  (C6KT50), PDX1_SCHPO  (O14027), 
PDX1_STELP  (Q41348), PDX1_SUBDO  (Q8WPW2), PDXS_ACTP2  (A3MZT8), 
PDXS_ACTP7  (B3GXB6), PDXS_ACTPJ  (B0BUD0), PDXS_AERPE  (Q9YFK2), 
PDXS_ANOFW  (B7GFL8), PDXS_ARCFU  (O29742), PDXS_BACA2  (A7Z0D3), 
PDXS_BACAA  (C3P8Q3), PDXS_BACAC  (C3LIY7), PDXS_BACAN  (Q81W27), 
PDXS_BACC0  (B7JJC6), PDXS_BACC1  (Q73FJ5), PDXS_BACC2  (B7IS29), 
PDXS_BACC3  (C1ES17), PDXS_BACC4  (B7HII3), PDXS_BACC7  (B7HPS6), 
PDXS_BACCI  (Q8L1A8), PDXS_BACCN  (A7GJS8), PDXS_BACCQ  (B9IYH8), 
PDXS_BACCR  (Q81JC6), PDXS_BACCZ  (Q63HF8), PDXS_BACHD  (Q9KGN6), 
PDXS_BACHK  (Q6HQ05), PDXS_BACLD  (Q65PL2), PDXS_BACP2  (A8FAD5), 
PDXS_BACSK  (Q5WKW2), PDXS_BACSU  (P37527), PDXS_BACWK  (A9VM99), 
PDXS_BIFA0  (B8DWP6), PDXS_BIFAA  (A1A3A5), PDXS_BIFLD  (B3DT80), 
PDXS_BIFLO  (Q8G574), PDXS_BIFLS  (B7GUB5), PDXS_CALS4  (Q8RBJ3), 
PDXS_CHLAA  (A9WFT9), PDXS_CHLAD  (B8G663), PDXS_CHLSY  (B9LIK3), 
PDXS_CLOAB  (Q97LG7), PDXS_CLOBL  (A7GH18), PDXS_CLOBM  (B1KYX5), 
PDXS_CLOCE  (B8I363), PDXS_CLONO  (Q84IL8), PDXS_CORDI  (P60800), 
PDXS_COREF  (Q8FPJ9), PDXS_CORGL  (P82134), PDXS_CORU7  (B1VDJ3), 
PDXS_DEHM1  (Q3Z9H3), PDXS_DEHMB  (A5FS82), PDXS_DEHMC  (Q3ZZB8), 
PDXS_DEIRA  (Q9RUL7), PDXS_DESDA  (B8J2D5), PDXS_DESK1  (B8D3X7), 
PDXS_DICT6  (B5YF85), PDXS_DICTD  (B8E121), PDXS_FRAP2  (B0TZ17), 
PDXS_FRAT1  (Q14IU8), PDXS_FRATF  (A7NDQ3), PDXS_FRATH  (Q2A260), 
PDXS_FRATM  (B2SDL5), PDXS_FRATN  (A0Q5I1), PDXS_FRATO  (Q0BKT2), 
PDXS_FRATT  (Q5NHE6), PDXS_FRATU  (O69190), PDXS_FRATW  (A4IZB5), 
PDXS_FUSNN  (Q8RDP7), PDXS_GEOKA  (Q5L3Y2), PDXS_GEOSW  (C5D337), 
PDXS_GEOTN  (A4IJ94), PDXS_HAEDU  (Q7VL86), PDXS_HAEI8  (Q4QJU5), 
PDXS_HAEIE  (A5UBN2), PDXS_HAEIG  (A5UF86), PDXS_HAEIN  (P45293), 
PDXS_HALLT  (B9LRS6), PDXS_HALMA  (Q5V1G7), PDXS_HALS3  (B0R6D5), 
PDXS_HALSA  (Q9HP57), PDXS_HALWD  (Q18F41), PDXS_HELMI  (B0TAQ4), 
PDXS_HERA2  (A9B891), PDXS_HYPBU  (A2BLL5), PDXS_LEIXX  (Q6AFB9), 
PDXS_LISIN  (Q929R9), PDXS_LISMC  (C1KX53), PDXS_LISMF  (Q71XR3), 
PDXS_LISMH  (B8DH17), PDXS_LISMO  (Q8Y5G2), PDXS_LISW6  (A0AKK8), 
PDXS_MACCJ  (B9E8T2), PDXS_META3  (A6UWM0), PDXS_METAC  (Q8TQH6), 
PDXS_METJA  (Q58090), PDXS_METKA  (Q8TVL8), PDXS_METLZ  (A2SPJ9), 
PDXS_METM5  (A4G086), PDXS_METM6  (A9A8I8), PDXS_METM7  (A6VI92), 
PDXS_METMA  (Q8PUA5), PDXS_METMP  (Q6M115), PDXS_METS5  (A4YI11), 
PDXS_METTH  (O26762), PDXS_METVA  (Q50841), PDXS_METVS  (A6UR91), 
PDXS_MYCA1  (A0QIC8), PDXS_MYCBO  (P60795), PDXS_MYCBP  (A1KLV6), 
PDXS_MYCBT  (C1AF77), PDXS_MYCLB  (B8ZUG3), PDXS_MYCLE  (O07145), 
PDXS_MYCPA  (Q73WF0), PDXS_MYCS2  (A0QWG8), PDXS_MYCTA  (A5U5V7), 
PDXS_MYCTO  (P9WII8), PDXS_MYCTU  (P9WII9), PDXS_NATPD  (Q3INE8), 
PDXS_NATTJ  (B2A2Z7), PDXS_NOCFA  (Q5YTD8), PDXS_OCEIH  (Q8EN03), 
PDXS_PARUW  (Q6MEN8), PDXS_PASMU  (Q9CLJ6), PDXS_PICTO  (Q6L2D8), 
PDXS_PROAC  (Q6A948), PDXS_PYRAB  (Q9V0J7), PDXS_PYRAE  (Q8ZUF0), 
PDXS_PYRAR  (A4WHH6), PDXS_PYRFU  (Q8U0Q6), PDXS_PYRHO  (O59080), 
PDXS_ROSCS  (A7NQB8), PDXS_ROSS1  (A5UY94), PDXS_SALAI  (A8LWZ4), 
PDXS_SALTO  (A4X5V3), PDXS_STAA1  (A7WYT1), PDXS_STAA2  (A6TYZ5), 
PDXS_STAA3  (Q2FJC1), PDXS_STAA8  (Q2G0Q1), PDXS_STAA9  (A5IQ72), 
PDXS_STAAC  (Q5HIF5), PDXS_STAAE  (A6QEH1), PDXS_STAAM  (P60797), 
PDXS_STAAN  (P60798), PDXS_STAAR  (Q6GJF0), PDXS_STAAS  (Q6GBW9), 
PDXS_STAAT  (A8YZL5), PDXS_STAAW  (P60799), PDXS_STACT  (B9DKX7), 
PDXS_STAEQ  (Q5HRN5), PDXS_STAES  (Q8CQV7), PDXS_STAHJ  (Q4L3H8), 
PDXS_STAS1  (Q49V28), PDXS_STRAW  (Q827U0), PDXS_STRCO  (Q9L286), 
PDXS_STRP2  (Q04JN5), PDXS_STRP4  (B5E5W1), PDXS_STRP7  (C1C863), 
PDXS_STRPI  (B1ICP9), PDXS_STRPJ  (B8ZL14), PDXS_STRPN  (Q97PX2), 
PDXS_STRR6  (Q8DP71), PDXS_STRZJ  (C1CF50), PDXS_STRZP  (C1CLG7), 
PDXS_STRZT  (C1CQQ0), PDXS_SULAC  (Q4J8L3), PDXS_SULIA  (C3N6C8), 
PDXS_SULIK  (C4KHU3), PDXS_SULIL  (C3MQK8), PDXS_SULIM  (C3MW86), 
PDXS_SULIN  (C3NGV8), PDXS_SULIY  (C3NET6), PDXS_SULSO  (Q9UWX3), 
PDXS_SULTO  (Q971B3), PDXS_SYNAS  (Q2LXR2), PDXS_THEAC  (Q9HKS5), 
PDXS_THEGJ  (C5A4G9), PDXS_THEKO  (Q5JFR1), PDXS_THEMA  (Q9WYU4), 
PDXS_THEON  (B6YVQ7), PDXS_THEP1  (A5IJU8), PDXS_THEP3  (B0KAS1), 
PDXS_THEPX  (B0K4N7), PDXS_THESQ  (B1L920), PDXS_THET2  (Q72KG1), 
PDXS_THET8  (Q5SKD9), PDXS_THEVO  (Q979Y3), PDXS_TREDE  (Q73QI7), 
PDXS_TROW8  (Q83HM5), PDXS_TROWT  (Q83MZ9), SNZ1_YEAST  (Q03148), 
SNZ2_YEAST  (P53824), SNZ3_YEAST  (P43545)
» More

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

PDXS_DESHD  (B8FZR3), PDXS_DESHY  (Q24PK7), PDXS_METST  (Q2NI73), 
PDXS_PYRCJ  (A3MSN0)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PDXS_CLOPA  (P81356)

		
PDB
[Detailed view]
19 PDB

1ZNN; 2ISS; 2NV1; 2NV2; 2YZR; 2ZBT; 3FEM; 3O05; 3O06; 3O07; 4ADS; 4ADT; 4ADU; 4FIQ; 4FIR; 4JDY; 4WXY; 4WXZ; 4WY0
» More

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