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Entry: PS01236

General information about the entry

Entry name [info] PDXT_SNO_1
Accession [info] PS01236
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED; 01-APR-2006 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00950

Name and characterization of the entry

Description [info] PdxT/SNO family family signature.
Pattern [info]
[GARVS]-[LVI]-[ILAV]-[LIVF]-P-G-G-E-S-[TS]-[STAV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 241 in 241 different sequences
Number of true positive hits 241 in 241 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.63 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
241 sequences

PDX2_ARATH  (Q8LAD0    ), PDX2_DICDI  (Q54J48    ), PDX2_PLABE  (Q4PJX5    ), 
PDX2_PLAF7  (Q8IIK4    ), PDXT_ACIC1  (A0LUK9    ), PDXT_ACTP2  (A3MZT9    ), 
PDXT_ACTP7  (B3GXB7    ), PDXT_ACTPJ  (B0BUD1    ), PDXT_AERPE  (Q9YFK4    ), 
PDXT_ANOFW  (B7GFL9    ), PDXT_ARCFU  (O29741    ), PDXT_ARTS2  (A0JXB5    ), 
PDXT_AZOPC  (B6YQU3    ), PDXT_BACAA  (C3P8Q4    ), PDXT_BACAC  (C3LIY8    ), 
PDXT_BACAH  (A0R890    ), PDXT_BACAN  (Q81W26    ), PDXT_BACC0  (B7JJC7    ), 
PDXT_BACC1  (Q73FJ4    ), PDXT_BACC2  (B7IS30    ), PDXT_BACC3  (C1ES18    ), 
PDXT_BACC4  (B7HII4    ), PDXT_BACC7  (B7HPS7    ), PDXT_BACCI  (Q8L1A7    ), 
PDXT_BACCN  (A7GJS9    ), PDXT_BACCQ  (B9IYH9    ), PDXT_BACCR  (Q81JC5    ), 
PDXT_BACCZ  (Q63HF7    ), PDXT_BACHD  (Q9KGN5    ), PDXT_BACHK  (Q6HQ04    ), 
PDXT_BACLD  (Q65PL1    ), PDXT_BACP2  (A8FAD6    ), PDXT_BACSK  (Q5WKW1    ), 
PDXT_BACSU  (P37528    ), PDXT_BACVZ  (A7Z0D4    ), PDXT_BACWK  (A9VMA0    ), 
PDXT_BIFAA  (A1A3A4    ), PDXT_BIFLO  (Q8G575    ), PDXT_BREBN  (C0ZH53    ), 
PDXT_CALBD  (B9MKY8    ), PDXT_CALMQ  (A8MAY1    ), PDXT_CALS4  (Q8RBJ4    ), 
PDXT_CALS8  (A4XIB6    ), PDXT_CARHZ  (Q3A8Q0    ), PDXT_CENSY  (A0RTP4    ), 
PDXT_CHLAA  (A9WFU0    ), PDXT_CHLSY  (B9LIK4    ), PDXT_CLAM3  (A5CS10    ), 
PDXT_CLAMS  (B0REB6    ), PDXT_CLOAB  (Q97LG6    ), PDXT_CLOB8  (A6M3G5    ), 
PDXT_CLOBM  (B1KYX4    ), PDXT_CLOCE  (B8I364    ), PDXT_CLOK1  (B9E3V5    ), 
PDXT_CLOK5  (A5MZY0    ), PDXT_CORDI  (Q6NK10    ), PDXT_CORGB  (A4QCC4    ), 
PDXT_CORGL  (Q8NS90    ), PDXT_DEHM1  (Q3Z8V9    ), PDXT_DEHMB  (A5FRL6    ), 
PDXT_DEHMC  (Q3ZX06    ), PDXT_DEIGD  (Q1IZC9    ), PDXT_DEIRA  (Q9RUL8    ), 
PDXT_DESAP  (B1I158    ), PDXT_DESHD  (B8FZR4    ), PDXT_DESHY  (Q24PK8    ), 
PDXT_DESRM  (A4J0G0    ), PDXT_DICT6  (B5YF84    ), PDXT_DICTD  (B8E120    ), 
PDXT_EXIS2  (B1YGC2    ), PDXT_FERNB  (A7HNV0    ), PDXT_FRAAA  (Q0RNV0    ), 
PDXT_FRACC  (Q2JD98    ), PDXT_FRAP2  (B0TZ16    ), PDXT_FRASN  (A8KZF0    ), 
PDXT_FRAT1  (Q14IU7    ), PDXT_FRATF  (A7NDQ2    ), PDXT_FRATH  (Q2A261    ), 
PDXT_FRATM  (B2SDL4    ), PDXT_FRATN  (A0Q5I2    ), PDXT_FRATO  (Q0BKT3    ), 
PDXT_FRATT  (Q5NHE5    ), PDXT_FRATW  (A4IZB4    ), PDXT_GEOKA  (Q5L3Y1    ), 
PDXT_GEOSE  (P83813    ), PDXT_GEOSW  (C5D338    ), PDXT_GEOTN  (A4IJ95    ), 
PDXT_HAEDU  (Q7VL87    ), PDXT_HAEI8  (Q4QJU4    ), PDXT_HAEIE  (A5UBN1    ), 
PDXT_HAEIG  (A5UF87    ), PDXT_HAEIN  (P45294    ), PDXT_HALMA  (Q5UZW7    ), 
PDXT_HALS3  (B0R879    ), PDXT_HALSA  (Q9HMD2    ), PDXT_HALWD  (Q18KL6    ), 
PDXT_HERA2  (A9B890    ), PDXT_HYPBU  (A2BLL6    ), PDXT_IGNH4  (A8A8T7    ), 
PDXT_KINRD  (A6WCI3    ), PDXT_KORCO  (B1L4Z3    ), PDXT_KORVE  (Q1IQH8    ), 
PDXT_LEIXX  (Q6AFB8    ), PDXT_LISIN  (Q929R8    ), PDXT_LISMC  (C1KX54    ), 
PDXT_LISMF  (Q71XR2    ), PDXT_LISMH  (B8DH16    ), PDXT_LISMO  (Q8Y5G1    ), 
PDXT_LISW6  (A0AKK9    ), PDXT_META3  (A6UWZ3    ), PDXT_METAC  (Q8TQH7    ), 
PDXT_METAR  (Q0W8A8    ), PDXT_METB6  (A7I472    ), PDXT_METBF  (Q465J4    ), 
PDXT_METBU  (Q12YR6    ), PDXT_METHJ  (Q2FTH1    ), PDXT_METJA  (Q59055    ), 
PDXT_METKA  (Q8TWH2    ), PDXT_METLZ  (A2SPK0    ), PDXT_METM5  (A4G0R6    ), 
PDXT_METM6  (A9A909    ), PDXT_METM7  (A6VHR9    ), PDXT_METMA  (Q8PUA4    ), 
PDXT_METMJ  (A3CRE5    ), PDXT_METMP  (P0C036    ), PDXT_METPE  (B8GE19    ), 
PDXT_METS5  (A4YI12    ), PDXT_METTP  (A0B7N4    ), PDXT_METVS  (A6UQT7    ), 
PDXT_MOOTA  (Q2RMI9    ), PDXT_MYCA1  (A0QIC6    ), PDXT_MYCA9  (B1MCJ8    ), 
PDXT_MYCBO  (Q7TY92    ), PDXT_MYCBP  (A1KLV4    ), PDXT_MYCBT  (C1AF75    ), 
PDXT_MYCLE  (Q9CCT5    ), PDXT_MYCMM  (B2HN48    ), PDXT_MYCPA  (Q73WF2    ), 
PDXT_MYCS2  (A0QWH0    ), PDXT_MYCSJ  (A3PYU8    ), PDXT_MYCSK  (A1UF87    ), 
PDXT_MYCSS  (Q1B9S6    ), PDXT_MYCTA  (A5U5V5    ), PDXT_MYCTO  (P9WII6    ), 
PDXT_MYCTU  (P9WII7    ), PDXT_MYCUA  (A0PSY6    ), PDXT_MYCVP  (A1T876    ), 
PDXT_NITMS  (A9A4S0    ), PDXT_NOCFA  (Q5YTE0    ), PDXT_NOCSJ  (A1SJA2    ), 
PDXT_OCEIH  (Q8EN04    ), PDXT_OENOB  (Q04F27    ), PDXT_PAEAT  (A1R728    ), 
PDXT_PARUW  (Q6MEN7    ), PDXT_PASMU  (Q9CLJ5    ), PDXT_PELTS  (A5D6D2    ), 
PDXT_PICTO  (Q6L1R3    ), PDXT_PROAC  (Q6A947    ), PDXT_PSECP  (B8H9E0    ), 
PDXT_PSELT  (A8F840    ), PDXT_PYRAB  (Q9V0J6    ), PDXT_PYRAE  (Q8ZUE9    ), 
PDXT_PYRAR  (A4WHH5    ), PDXT_PYRFU  (Q8TH23    ), PDXT_PYRHO  (O59079    ), 
PDXT_PYRNV  (B1YB90    ), PDXT_RENSM  (A9WSE8    ), PDXT_RHOJR  (Q0S1D2    ), 
PDXT_RHOOB  (C1B4C5    ), PDXT_ROSCS  (A7NQB7    ), PDXT_ROSS1  (A5UY93    ), 
PDXT_RUBXD  (Q1AWE7    ), PDXT_SACEN  (A4FBA2    ), PDXT_SALAI  (A8LWZ5    ), 
PDXT_SALTO  (A4X5V4    ), PDXT_SOLUE  (Q02CB5    ), PDXT_STAA1  (A7WYT2    ), 
PDXT_STAA2  (A6TYZ6    ), PDXT_STAA3  (Q2FJC0    ), PDXT_STAA8  (Q2G0Q0    ), 
PDXT_STAA9  (A5IQ73    ), PDXT_STAAB  (Q2YSE1    ), PDXT_STAAC  (Q5HIF4    ), 
PDXT_STAAE  (A6QEH2    ), PDXT_STAAM  (Q99W83    ), PDXT_STAAN  (Q7A7A1    ), 
PDXT_STAAR  (Q6GJE9    ), PDXT_STAAS  (Q6GBW8    ), PDXT_STAAT  (A8YZL6    ), 
PDXT_STAAW  (Q7A1R6    ), PDXT_STACT  (B9DKX8    ), PDXT_STAEQ  (Q5HRN4    ), 
PDXT_STAES  (Q8CQV8    ), PDXT_STAHJ  (Q4L3H9    ), PDXT_STAMF  (A3DM32    ), 
PDXT_STAS1  (Q49V29    ), PDXT_STRAW  (Q81ZV5    ), PDXT_STRCO  (Q9L287    ), 
PDXT_STRGG  (B1W3G0    ), PDXT_STRP2  (Q04JN6    ), PDXT_STRP4  (B5E5W0    ), 
PDXT_STRP7  (C1C862    ), PDXT_STRPI  (B1ICP8    ), PDXT_STRPJ  (B8ZL13    ), 
PDXT_STRPN  (Q97PX3    ), PDXT_STRPS  (B2IQT4    ), PDXT_STRR6  (Q8DP72    ), 
PDXT_STRZJ  (C1CF49    ), PDXT_STRZP  (C1CLG6    ), PDXT_STRZT  (C1CQQ1    ), 
PDXT_SULAC  (Q4J8L2    ), PDXT_SULIA  (C3N6C7    ), PDXT_SULIK  (C4KHU2    ), 
PDXT_SULIL  (C3MQK7    ), PDXT_SULIM  (C3MW85    ), PDXT_SULIN  (C3NGV9    ), 
PDXT_SULIY  (C3NET5    ), PDXT_SULSO  (Q9UWX4    ), PDXT_SULTO  (Q971B2    ), 
PDXT_THEAB  (B7IEZ6    ), PDXT_THEAC  (Q9HM60    ), PDXT_THEFY  (Q47N39    ), 
PDXT_THEGJ  (C5A4H0    ), PDXT_THEKO  (Q5JFR2    ), PDXT_THEM4  (A6LP41    ), 
PDXT_THEMA  (Q9WYU3    ), PDXT_THENN  (B9KBI1    ), PDXT_THEON  (B6YVQ8    ), 
PDXT_THEP1  (A5IJU9    ), PDXT_THEP3  (B0KAS0    ), PDXT_THEPX  (B0K4N6    ), 
PDXT_THESQ  (B1L921    ), PDXT_THET2  (Q72KF8    ), PDXT_THET8  (Q5SKD6    ), 
PDXT_THEVO  (Q97CP5    ), PDXT_TROW8  (Q83HM6    ), PDXT_TROWT  (Q83GK3    ), 
SNO1_YEAST  (Q03144    ), SNO2_YEAST  (P53823    ), SNO3_YEAST  (P43544    ), 
YFM8_SCHPO  (Q9UTE4    )
» more

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

PDXT_CHLAD  (B8G664    ), PDXT_CORJK  (Q4JVD5    ), PDXT_HALLT  (B9LSC8    ), 
PDXT_KOSOT  (C5CG73    ), PDXT_METS3  (A5UK48    ), PDXT_METST  (Q2NGI4    ), 
PDXT_METTH  (O26292    ), PDXT_NATPD  (Q3IU60    ), PDXT_PYRCJ  (A3MSM9    ), 
PDXT_PYRIL  (A1RU67    ), PDXT_SYNAS  (Q2LXR3    )
» more

PDB
[Detailed view]
10 PDB

1Q7R; 1R9G; 2ABW; 2ISS; 2NV0; 2NV2; 2YWD; 2YWJ; 4ADS; 4WXY

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