Entry: PS01236

General information about the entry

Entry name [info] PDXT_SNO_1
Accession [info] PS01236
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); APR-2006 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00950

Name and characterization of the entry

Description [info] PdxT/SNO family family signature.
Pattern [info]
[GARVS]-[LVI]-[ILAV]-[LIVF]-P-G-G-E-S-[TS]-[STAV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 241 in 241 different sequences
Number of true positive hits 241 in 241 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.63 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
241 sequences

PDX2_ARATH  (Q8LAD0), PDX2_DICDI  (Q54J48), PDX2_PLABE  (Q4PJX5), 
PDX2_PLAF7  (Q8IIK4), PDXT_ACIC1  (A0LUK9), PDXT_ACTP2  (A3MZT9), 
PDXT_ACTP7  (B3GXB7), PDXT_ACTPJ  (B0BUD1), PDXT_AERPE  (Q9YFK4), 
PDXT_ANOFW  (B7GFL9), PDXT_ARCFU  (O29741), PDXT_ARTAT  (A1R728), 
PDXT_ARTCA  (B8H9E0), PDXT_ARTS2  (A0JXB5), PDXT_AZOPC  (B6YQU3), 
PDXT_BACA2  (A7Z0D4), PDXT_BACAA  (C3P8Q4), PDXT_BACAC  (C3LIY8), 
PDXT_BACAH  (A0R890), PDXT_BACAN  (Q81W26), PDXT_BACC0  (B7JJC7), 
PDXT_BACC1  (Q73FJ4), PDXT_BACC2  (B7IS30), PDXT_BACC3  (C1ES18), 
PDXT_BACC4  (B7HII4), PDXT_BACC7  (B7HPS7), PDXT_BACCI  (Q8L1A7), 
PDXT_BACCN  (A7GJS9), PDXT_BACCQ  (B9IYH9), PDXT_BACCR  (Q81JC5), 
PDXT_BACCZ  (Q63HF7), PDXT_BACHD  (Q9KGN5), PDXT_BACHK  (Q6HQ04), 
PDXT_BACLD  (Q65PL1), PDXT_BACP2  (A8FAD6), PDXT_BACSK  (Q5WKW1), 
PDXT_BACSU  (P37528), PDXT_BACWK  (A9VMA0), PDXT_BIFAA  (A1A3A4), 
PDXT_BIFLO  (Q8G575), PDXT_BREBN  (C0ZH53), PDXT_CALBD  (B9MKY8), 
PDXT_CALMQ  (A8MAY1), PDXT_CALS4  (Q8RBJ4), PDXT_CALS8  (A4XIB6), 
PDXT_CARHZ  (Q3A8Q0), PDXT_CENSY  (A0RTP4), PDXT_CHLAA  (A9WFU0), 
PDXT_CHLSY  (B9LIK4), PDXT_CLAM3  (A5CS10), PDXT_CLAMS  (B0REB6), 
PDXT_CLOAB  (Q97LG6), PDXT_CLOB8  (A6M3G5), PDXT_CLOBM  (B1KYX4), 
PDXT_CLOCE  (B8I364), PDXT_CLOK1  (B9E3V5), PDXT_CLOK5  (A5MZY0), 
PDXT_CORDI  (Q6NK10), PDXT_CORGB  (A4QCC4), PDXT_CORGL  (Q8NS90), 
PDXT_DEHM1  (Q3Z8V9), PDXT_DEHMB  (A5FRL6), PDXT_DEHMC  (Q3ZX06), 
PDXT_DEIGD  (Q1IZC9), PDXT_DEIRA  (Q9RUL8), PDXT_DESAP  (B1I158), 
PDXT_DESHD  (B8FZR4), PDXT_DESHY  (Q24PK8), PDXT_DESRM  (A4J0G0), 
PDXT_DICT6  (B5YF84), PDXT_DICTD  (B8E120), PDXT_EXIS2  (B1YGC2), 
PDXT_FERNB  (A7HNV0), PDXT_FRAAA  (Q0RNV0), PDXT_FRAP2  (B0TZ16), 
PDXT_FRASC  (Q2JD98), PDXT_FRASN  (A8KZF0), PDXT_FRAT1  (Q14IU7), 
PDXT_FRATF  (A7NDQ2), PDXT_FRATH  (Q2A261), PDXT_FRATM  (B2SDL4), 
PDXT_FRATN  (A0Q5I2), PDXT_FRATO  (Q0BKT3), PDXT_FRATT  (Q5NHE5), 
PDXT_FRATW  (A4IZB4), PDXT_GEOKA  (Q5L3Y1), PDXT_GEOSE  (P83813), 
PDXT_GEOSW  (C5D338), PDXT_GEOTN  (A4IJ95), PDXT_HAEDU  (Q7VL87), 
PDXT_HAEI8  (Q4QJU4), PDXT_HAEIE  (A5UBN1), PDXT_HAEIG  (A5UF87), 
PDXT_HAEIN  (P45294), PDXT_HALMA  (Q5UZW7), PDXT_HALS3  (B0R879), 
PDXT_HALSA  (Q9HMD2), PDXT_HALWD  (Q18KL6), PDXT_HERA2  (A9B890), 
PDXT_HYPBU  (A2BLL6), PDXT_IGNH4  (A8A8T7), PDXT_KINRD  (A6WCI3), 
PDXT_KORCO  (B1L4Z3), PDXT_KORVE  (Q1IQH8), PDXT_LEIXX  (Q6AFB8), 
PDXT_LISIN  (Q929R8), PDXT_LISMC  (C1KX54), PDXT_LISMF  (Q71XR2), 
PDXT_LISMH  (B8DH16), PDXT_LISMO  (Q8Y5G1), PDXT_LISW6  (A0AKK9), 
PDXT_META3  (A6UWZ3), PDXT_METAC  (Q8TQH7), PDXT_METAR  (Q0W8A8), 
PDXT_METB6  (A7I472), PDXT_METBF  (Q465J4), PDXT_METBU  (Q12YR6), 
PDXT_METHJ  (Q2FTH1), PDXT_METJA  (Q59055), PDXT_METKA  (Q8TWH2), 
PDXT_METLZ  (A2SPK0), PDXT_METM5  (A4G0R6), PDXT_METM6  (A9A909), 
PDXT_METM7  (A6VHR9), PDXT_METMA  (Q8PUA4), PDXT_METMJ  (A3CRE5), 
PDXT_METMP  (P0C036), PDXT_METPE  (B8GE19), PDXT_METS5  (A4YI12), 
PDXT_METTP  (A0B7N4), PDXT_METVS  (A6UQT7), PDXT_MOOTA  (Q2RMI9), 
PDXT_MYCA1  (A0QIC6), PDXT_MYCA9  (B1MCJ8), PDXT_MYCBO  (Q7TY92), 
PDXT_MYCBP  (A1KLV4), PDXT_MYCBT  (C1AF75), PDXT_MYCLE  (Q9CCT5), 
PDXT_MYCMM  (B2HN48), PDXT_MYCPA  (Q73WF2), PDXT_MYCS2  (A0QWH0), 
PDXT_MYCSJ  (A3PYU8), PDXT_MYCSK  (A1UF87), PDXT_MYCSS  (Q1B9S6), 
PDXT_MYCTA  (A5U5V5), PDXT_MYCTO  (P9WII6), PDXT_MYCTU  (P9WII7), 
PDXT_MYCUA  (A0PSY6), PDXT_MYCVP  (A1T876), PDXT_NITMS  (A9A4S0), 
PDXT_NOCFA  (Q5YTE0), PDXT_NOCSJ  (A1SJA2), PDXT_OCEIH  (Q8EN04), 
PDXT_OENOB  (Q04F27), PDXT_PARUW  (Q6MEN7), PDXT_PASMU  (Q9CLJ5), 
PDXT_PELTS  (A5D6D2), PDXT_PICTO  (Q6L1R3), PDXT_PROAC  (Q6A947), 
PDXT_PSELT  (A8F840), PDXT_PYRAB  (Q9V0J6), PDXT_PYRAE  (Q8ZUE9), 
PDXT_PYRAR  (A4WHH5), PDXT_PYRFU  (Q8TH23), PDXT_PYRHO  (O59079), 
PDXT_PYRNV  (B1YB90), PDXT_RENSM  (A9WSE8), PDXT_RHOJR  (Q0S1D2), 
PDXT_RHOOB  (C1B4C5), PDXT_ROSCS  (A7NQB7), PDXT_ROSS1  (A5UY93), 
PDXT_RUBXD  (Q1AWE7), PDXT_SACEN  (A4FBA2), PDXT_SALAI  (A8LWZ5), 
PDXT_SALTO  (A4X5V4), PDXT_SOLUE  (Q02CB5), PDXT_STAA1  (A7WYT2), 
PDXT_STAA2  (A6TYZ6), PDXT_STAA3  (Q2FJC0), PDXT_STAA8  (Q2G0Q0), 
PDXT_STAA9  (A5IQ73), PDXT_STAAB  (Q2YSE1), PDXT_STAAC  (Q5HIF4), 
PDXT_STAAE  (A6QEH2), PDXT_STAAM  (Q99W83), PDXT_STAAN  (Q7A7A1), 
PDXT_STAAR  (Q6GJE9), PDXT_STAAS  (Q6GBW8), PDXT_STAAT  (A8YZL6), 
PDXT_STAAW  (Q7A1R6), PDXT_STACT  (B9DKX8), PDXT_STAEQ  (Q5HRN4), 
PDXT_STAES  (Q8CQV8), PDXT_STAHJ  (Q4L3H9), PDXT_STAMF  (A3DM32), 
PDXT_STAS1  (Q49V29), PDXT_STRAW  (Q81ZV5), PDXT_STRCO  (Q9L287), 
PDXT_STRGG  (B1W3G0), PDXT_STRP2  (Q04JN6), PDXT_STRP4  (B5E5W0), 
PDXT_STRP7  (C1C862), PDXT_STRPI  (B1ICP8), PDXT_STRPJ  (B8ZL13), 
PDXT_STRPN  (Q97PX3), PDXT_STRPS  (B2IQT4), PDXT_STRR6  (Q8DP72), 
PDXT_STRZJ  (C1CF49), PDXT_STRZP  (C1CLG6), PDXT_STRZT  (C1CQQ1), 
PDXT_SULAC  (Q4J8L2), PDXT_SULIA  (C3N6C7), PDXT_SULIK  (C4KHU2), 
PDXT_SULIL  (C3MQK7), PDXT_SULIM  (C3MW85), PDXT_SULIN  (C3NGV9), 
PDXT_SULIY  (C3NET5), PDXT_SULSO  (Q9UWX4), PDXT_SULTO  (Q971B2), 
PDXT_THEAB  (B7IEZ6), PDXT_THEAC  (Q9HM60), PDXT_THEFY  (Q47N39), 
PDXT_THEGJ  (C5A4H0), PDXT_THEKO  (Q5JFR2), PDXT_THEM4  (A6LP41), 
PDXT_THEMA  (Q9WYU3), PDXT_THENN  (B9KBI1), PDXT_THEON  (B6YVQ8), 
PDXT_THEP1  (A5IJU9), PDXT_THEP3  (B0KAS0), PDXT_THEPX  (B0K4N6), 
PDXT_THESQ  (B1L921), PDXT_THET2  (Q72KF8), PDXT_THET8  (Q5SKD6), 
PDXT_THEVO  (Q97CP5), PDXT_TROW8  (Q83HM6), PDXT_TROWT  (Q83GK3), 
SNO1_YEAST  (Q03144), SNO2_YEAST  (P53823), SNO3_YEAST  (P43544), 
YFM8_SCHPO  (Q9UTE4)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

PDXT_CHLAD  (B8G664), PDXT_CORJK  (Q4JVD5), PDXT_HALLT  (B9LSC8), 
PDXT_KOSOT  (C5CG73), PDXT_METS3  (A5UK48), PDXT_METST  (Q2NGI4), 
PDXT_METTH  (O26292), PDXT_NATPD  (Q3IU60), PDXT_PYRCJ  (A3MSM9), 
PDXT_PYRIL  (A1RU67), PDXT_SYNAS  (Q2LXR3)
» More

PDB
[Detailed view]
10 PDB

1Q7R; 1R9G; 2ABW; 2ISS; 2NV0; 2NV2; 2YWD; 2YWJ; 4ADS; 4WXY

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