Entry: PS01236

General information about the entry

Entry name [info] PDXT_SNO_1
Accession [info] PS01236
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); APR-2006 (DATA UPDATE); FEB-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00950

Name and characterization of the entry

Description [info] PdxT/SNO family family signature.
Pattern [info]
[GARVS]-[LVI]-[ILAV]-[LIVF]-P-G-G-E-S-[TS]-[STAV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_04 which contains 548'208 sequence entries.


Total number of hits 241 in 241 different sequences
Number of true positive hits 241 in 241 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.63 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
241 sequences

PDX2_ARATH  (Q8LAD0), PDX2_DICDI  (Q54J48), PDX2_PLABE  (Q4PJX5), 
PDX2_PLAF7  (Q8IIK4), PDXT_ACIC1  (A0LUK9), PDXT_ACTP2  (A3MZT9), 
PDXT_ACTP7  (B3GXB7), PDXT_ACTPJ  (B0BUD1), PDXT_AERPE  (Q9YFK4), 
PDXT_ANOFW  (B7GFL9), PDXT_ARCFU  (O29741), PDXT_ARTAT  (A1R728), 
PDXT_ARTCA  (B8H9E0), PDXT_ARTS2  (A0JXB5), PDXT_AZOPC  (B6YQU3), 
PDXT_BACA2  (A7Z0D4), PDXT_BACAA  (C3P8Q4), PDXT_BACAC  (C3LIY8), 
PDXT_BACAH  (A0R890), PDXT_BACAN  (Q81W26), PDXT_BACC0  (B7JJC7), 
PDXT_BACC1  (Q73FJ4), PDXT_BACC2  (B7IS30), PDXT_BACC3  (C1ES18), 
PDXT_BACC4  (B7HII4), PDXT_BACC7  (B7HPS7), PDXT_BACCI  (Q8L1A7), 
PDXT_BACCN  (A7GJS9), PDXT_BACCQ  (B9IYH9), PDXT_BACCR  (Q81JC5), 
PDXT_BACCZ  (Q63HF7), PDXT_BACHD  (Q9KGN5), PDXT_BACHK  (Q6HQ04), 
PDXT_BACLD  (Q65PL1), PDXT_BACP2  (A8FAD6), PDXT_BACSK  (Q5WKW1), 
PDXT_BACSU  (P37528), PDXT_BACWK  (A9VMA0), PDXT_BIFAA  (A1A3A4), 
PDXT_BIFLO  (Q8G575), PDXT_BREBN  (C0ZH53), PDXT_CALBD  (B9MKY8), 
PDXT_CALMQ  (A8MAY1), PDXT_CALS4  (Q8RBJ4), PDXT_CALS8  (A4XIB6), 
PDXT_CARHZ  (Q3A8Q0), PDXT_CENSY  (A0RTP4), PDXT_CHLAA  (A9WFU0), 
PDXT_CHLSY  (B9LIK4), PDXT_CLAM3  (A5CS10), PDXT_CLAMS  (B0REB6), 
PDXT_CLOAB  (Q97LG6), PDXT_CLOB8  (A6M3G5), PDXT_CLOBM  (B1KYX4), 
PDXT_CLOCE  (B8I364), PDXT_CLOK1  (B9E3V5), PDXT_CLOK5  (A5MZY0), 
PDXT_CORDI  (Q6NK10), PDXT_CORGB  (A4QCC4), PDXT_CORGL  (Q8NS90), 
PDXT_DEHM1  (Q3Z8V9), PDXT_DEHMB  (A5FRL6), PDXT_DEHMC  (Q3ZX06), 
PDXT_DEIGD  (Q1IZC9), PDXT_DEIRA  (Q9RUL8), PDXT_DESAP  (B1I158), 
PDXT_DESHD  (B8FZR4), PDXT_DESHY  (Q24PK8), PDXT_DESRM  (A4J0G0), 
PDXT_DICT6  (B5YF84), PDXT_DICTD  (B8E120), PDXT_EXIS2  (B1YGC2), 
PDXT_FERNB  (A7HNV0), PDXT_FRAAA  (Q0RNV0), PDXT_FRAP2  (B0TZ16), 
PDXT_FRASC  (Q2JD98), PDXT_FRASN  (A8KZF0), PDXT_FRAT1  (Q14IU7), 
PDXT_FRATF  (A7NDQ2), PDXT_FRATH  (Q2A261), PDXT_FRATM  (B2SDL4), 
PDXT_FRATN  (A0Q5I2), PDXT_FRATO  (Q0BKT3), PDXT_FRATT  (Q5NHE5), 
PDXT_FRATW  (A4IZB4), PDXT_GEOKA  (Q5L3Y1), PDXT_GEOSE  (P83813), 
PDXT_GEOSW  (C5D338), PDXT_GEOTN  (A4IJ95), PDXT_HAEDU  (Q7VL87), 
PDXT_HAEI8  (Q4QJU4), PDXT_HAEIE  (A5UBN1), PDXT_HAEIG  (A5UF87), 
PDXT_HAEIN  (P45294), PDXT_HALMA  (Q5UZW7), PDXT_HALS3  (B0R879), 
PDXT_HALSA  (Q9HMD2), PDXT_HALWD  (Q18KL6), PDXT_HERA2  (A9B890), 
PDXT_HYPBU  (A2BLL6), PDXT_IGNH4  (A8A8T7), PDXT_KINRD  (A6WCI3), 
PDXT_KORCO  (B1L4Z3), PDXT_KORVE  (Q1IQH8), PDXT_LEIXX  (Q6AFB8), 
PDXT_LISIN  (Q929R8), PDXT_LISMC  (C1KX54), PDXT_LISMF  (Q71XR2), 
PDXT_LISMH  (B8DH16), PDXT_LISMO  (Q8Y5G1), PDXT_LISW6  (A0AKK9), 
PDXT_META3  (A6UWZ3), PDXT_METAC  (Q8TQH7), PDXT_METB6  (A7I472), 
PDXT_METBF  (Q465J4), PDXT_METBU  (Q12YR6), PDXT_METHJ  (Q2FTH1), 
PDXT_METJA  (Q59055), PDXT_METKA  (Q8TWH2), PDXT_METLZ  (A2SPK0), 
PDXT_METM5  (A4G0R6), PDXT_METM6  (A9A909), PDXT_METM7  (A6VHR9), 
PDXT_METMA  (Q8PUA4), PDXT_METMJ  (A3CRE5), PDXT_METMP  (P0C036), 
PDXT_METPE  (B8GE19), PDXT_METS5  (A4YI12), PDXT_METTP  (A0B7N4), 
PDXT_METVS  (A6UQT7), PDXT_MOOTA  (Q2RMI9), PDXT_MYCA1  (A0QIC6), 
PDXT_MYCA9  (B1MCJ8), PDXT_MYCBO  (Q7TY92), PDXT_MYCBP  (A1KLV4), 
PDXT_MYCBT  (C1AF75), PDXT_MYCLE  (Q9CCT5), PDXT_MYCMM  (B2HN48), 
PDXT_MYCPA  (Q73WF2), PDXT_MYCS2  (A0QWH0), PDXT_MYCSJ  (A3PYU8), 
PDXT_MYCSK  (A1UF87), PDXT_MYCSS  (Q1B9S6), PDXT_MYCTA  (A5U5V5), 
PDXT_MYCTO  (P9WII6), PDXT_MYCTU  (P9WII7), PDXT_MYCUA  (A0PSY6), 
PDXT_MYCVP  (A1T876), PDXT_NITMS  (A9A4S0), PDXT_NOCFA  (Q5YTE0), 
PDXT_NOCSJ  (A1SJA2), PDXT_OCEIH  (Q8EN04), PDXT_OENOB  (Q04F27), 
PDXT_PARUW  (Q6MEN7), PDXT_PASMU  (Q9CLJ5), PDXT_PELTS  (A5D6D2), 
PDXT_PICTO  (Q6L1R3), PDXT_PROAC  (Q6A947), PDXT_PYRAB  (Q9V0J6), 
PDXT_PYRAE  (Q8ZUE9), PDXT_PYRAR  (A4WHH5), PDXT_PYRFU  (Q8TH23), 
PDXT_PYRHO  (O59079), PDXT_PYRNV  (B1YB90), PDXT_RENSM  (A9WSE8), 
PDXT_RHOJR  (Q0S1D2), PDXT_RHOOB  (C1B4C5), PDXT_ROSCS  (A7NQB7), 
PDXT_ROSS1  (A5UY93), PDXT_RUBXD  (Q1AWE7), PDXT_SACEN  (A4FBA2), 
PDXT_SALAI  (A8LWZ5), PDXT_SALTO  (A4X5V4), PDXT_SOLUE  (Q02CB5), 
PDXT_STAA1  (A7WYT2), PDXT_STAA2  (A6TYZ6), PDXT_STAA3  (Q2FJC0), 
PDXT_STAA8  (Q2G0Q0), PDXT_STAA9  (A5IQ73), PDXT_STAAB  (Q2YSE1), 
PDXT_STAAC  (Q5HIF4), PDXT_STAAE  (A6QEH2), PDXT_STAAM  (Q99W83), 
PDXT_STAAN  (Q7A7A1), PDXT_STAAR  (Q6GJE9), PDXT_STAAS  (Q6GBW8), 
PDXT_STAAT  (A8YZL6), PDXT_STAAW  (Q7A1R6), PDXT_STACT  (B9DKX8), 
PDXT_STAEQ  (Q5HRN4), PDXT_STAES  (Q8CQV8), PDXT_STAHJ  (Q4L3H9), 
PDXT_STAMF  (A3DM32), PDXT_STAS1  (Q49V29), PDXT_STRAW  (Q81ZV5), 
PDXT_STRCO  (Q9L287), PDXT_STRGG  (B1W3G0), PDXT_STRP2  (Q04JN6), 
PDXT_STRP4  (B5E5W0), PDXT_STRP7  (C1C862), PDXT_STRPI  (B1ICP8), 
PDXT_STRPJ  (B8ZL13), PDXT_STRPN  (Q97PX3), PDXT_STRPS  (B2IQT4), 
PDXT_STRR6  (Q8DP72), PDXT_STRZJ  (C1CF49), PDXT_STRZP  (C1CLG6), 
PDXT_STRZT  (C1CQQ1), PDXT_SULAC  (Q4J8L2), PDXT_SULIA  (C3N6C7), 
PDXT_SULIK  (C4KHU2), PDXT_SULIL  (C3MQK7), PDXT_SULIM  (C3MW85), 
PDXT_SULIN  (C3NGV9), PDXT_SULIY  (C3NET5), PDXT_SULSO  (Q9UWX4), 
PDXT_SULTO  (Q971B2), PDXT_THEAB  (B7IEZ6), PDXT_THEAC  (Q9HM60), 
PDXT_THEFY  (Q47N39), PDXT_THEGJ  (C5A4H0), PDXT_THEKO  (Q5JFR2), 
PDXT_THELT  (A8F840), PDXT_THEM4  (A6LP41), PDXT_THEMA  (Q9WYU3), 
PDXT_THENN  (B9KBI1), PDXT_THEON  (B6YVQ8), PDXT_THEP1  (A5IJU9), 
PDXT_THEP3  (B0KAS0), PDXT_THEPX  (B0K4N6), PDXT_THESQ  (B1L921), 
PDXT_THET2  (Q72KF8), PDXT_THET8  (Q5SKD6), PDXT_THEVO  (Q97CP5), 
PDXT_TROW8  (Q83HM6), PDXT_TROWT  (Q83GK3), PDXT_UNCMA  (Q0W8A8), 
SNO1_YEAST  (Q03144), SNO2_YEAST  (P53823), SNO3_YEAST  (P43544), 
YFM8_SCHPO  (Q9UTE4)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

PDXT_CHLAD  (B8G664), PDXT_CORJK  (Q4JVD5), PDXT_HALLT  (B9LSC8), 
PDXT_KOSOT  (C5CG73), PDXT_METS3  (A5UK48), PDXT_METST  (Q2NGI4), 
PDXT_METTH  (O26292), PDXT_NATPD  (Q3IU60), PDXT_PYRCJ  (A3MSM9), 
PDXT_PYRIL  (A1RU67), PDXT_SYNAS  (Q2LXR3)
» More

PDB
[Detailed view]
10 PDB

1Q7R; 1R9G; 2ABW; 2ISS; 2NV0; 2NV2; 2YWD; 2YWJ; 4ADS; 4WXY

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