Due to maintenance work, this service will not be available Thursday August 21st between 7am and 8am CEST.
Entry: PS01237

Forthcoming changes to the profile format
General information about the entry

Entry name [info] UPF0028
Accession [info] PS01237
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00951

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0028 signature.
Pattern [info]
[GA]-[GS]-G-[GA]-A-R-G-x-[SA]-H-x-G-x(9)-[IVY]-x-[IV]-[DV]-x(2)-[GA]-G-x-
S-x-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 41 in 41 different sequences
Number of true positive hits 41 in 41 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.18 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
41 sequences

NTE1_ASHGO  (Q756Z0), NTE1_ASPCL  (A1C9L6), NTE1_ASPFU  (Q4WA15), 
NTE1_CANGA  (Q6FKJ1), NTE1_COCIM  (Q1DLC7), NTE1_CRYNB  (P0CP37), 
NTE1_CRYNJ  (P0CP36), NTE1_EMENI  (Q5BAE9), NTE1_ENCCU  (Q8SVN8), 
NTE1_KLULA  (Q6CWC2), NTE1_MAGO7  (A4QVZ8), NTE1_NEOFI  (A1D9Y2), 
NTE1_NEUCR  (Q7S8J1), NTE1_USTMA  (Q4PF83), NTE1_YARLI  (Q6CF18), 
NTE1_YEAST  (Q04958), PLPL6_HUMAN (Q8IY17), PLPL6_MOUSE (Q3TRM4), 
PLPL6_PONAB (Q5RDS0), RSSA_ECOLI  (P0AFR0), RSSA_SHIFL  (P0AFR1), 
SWS_DROAN   (B3MRI9), SWS_DROER   (B3NY03), SWS_DROGR   (B4JLX2), 
SWS_DROME   (Q9U969), SWS_DROMO   (B4L535), SWS_DROPE   (B4H3U8), 
SWS_DROPS   (B5DKS8), SWS_DROSE   (B4IL64), SWS_DROVI   (B4M709), 
SWS_DROWI   (B4N1W9), SWS_DROYA   (B4Q0P3), Y1063_MYCTO (P9WIY8), 
Y1063_MYCTU (P9WIY9), Y1092_MYCBO (P67099), Y2565_MYCTO (P9WIY6), 
Y2565_MYCTU (P9WIY7), Y2594_MYCBO (P0A643), YLBK_BACSU  (O34731), 
YOL4_CAEEL  (Q02331), YVL7_CAEEL  (Q21534)
» More

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

PLPL7_HUMAN (Q6ZV29), PLPL7_MOUSE (A2AJ88), PLPL7_RAT   (Q5BK26)

		

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission