Entry: PS01239

General information about the entry
Entry name DYNEIN_LIGHT_1
Accession number PS01239
Entry type PATTERN
Date NOV-1997 (CREATED); DEC-2001 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00953
Name and characterization of the entry
DescriptionDynein light chain type 1 signature.
Pattern H-x-[IV]-x-G-[KR]-x-F-[GA]-S-x-V-[ST]-[HY]-E.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 27 hits in 27 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 27 hits in 27 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 4
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 87.10 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
DYL1_ASHGO  (Q759T0), DYL1_BOVIN  (P61285), DYL1_CAEEL  (Q22799), 
DYL1_CANGA  (Q6FUJ0), DYL1_CHLRE  (Q39580), DYL1_DEBHA  (Q6BZF8), 
DYL1_DROME  (Q24117), DYL1_EMENI  (O94111), DYL1_HELCR  (O02414), 
DYL1_HUMAN  (P63167), DYL1_KLULA  (Q6CWX4), DYL1_MACFA  (P61273), 
DYL1_MOUSE  (P63168), DYL1_RABIT  (P63169), DYL1_RAT    (P63170), 
DYL1_SCHMA  (Q94758), DYL1_SCHPO  (Q9UR05), DYL1_YEAST  (Q02647), 
DYL2_BOVIN  (Q3MHR3), DYL2_CAEEL  (Q21557), DYL2_CHLRE  (Q39579), 
DYL2_DROME  (O96860), DYL2_HUMAN  (Q96FJ2), DYL2_MOUSE  (Q9D0M5), 
DYL2_RAT    (Q78P75), DYL2_SCHMA  (Q94748), DYL_DICDI   (Q86A88)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
DNAL4_BOVIN (Q32KN5), DNAL4_HUMAN (O96015), DNAL4_MOUSE (Q9DCM4), 
DNAL4_PIG   (A4F4L4)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1CMI; 1F3C; 1F95; 1F96; 1PWJ; 1RE6; 1RHW; 2P2T; 2PG1; 2XQQ; 3BRI; 3BRL; 3DVH; 3DVP; 3DVT; 3E2B; 3FM7; 3GLW; 3P8M; 4DS1;

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