Entry: PS01240

General information about the entry
Entry name PNP_MTAP_2
Accession number PS01240
Entry type PATTERN
Date NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00954
Name and characterization of the entry
DescriptionPurine and other phosphorylases family 2 signature.
Pattern [LIVF]-x(3)-[GS]-x(2)-H-x-[LIVMFY]-x(4)-[LIVMF]-x(3)-[ATV]-x(1,2)-[LIVM]- x-[ATV]-x(4)-[GN]-x(3,4)-[LIVMF](2)-x(2)-[STN]-[SAGT]-x-G-[GS]-[LIVM].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 71 hits in 71 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 71 hits in 71 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 23
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 75.53 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
MTAP1_PUCGT (E3K7C3), MTAP2_PUCGT (E3K7C1), MTAP_AEDAE  (Q16MW6), 
MTAP_AERPE  (Q9YAQ8), MTAP_AJECG  (C0NRX4), MTAP_ANODA  (E3XFR6), 
MTAP_ANOGA  (Q7Q9N9), MTAP_ASPFU  (Q4WMU1), MTAP_BOVIN  (Q3MHF7), 
MTAP_CAEBR  (A8XGS6), MTAP_CAEEL  (Q09438), MTAP_CANAL  (Q59ST1), 
MTAP_CANAW  (C4YQD9), MTAP_CENSY  (A0RVQ7), MTAP_CHLAA  (A9WAL0), 
MTAP_CIOIN  (F6X2V8), MTAP_COPC7  (A8P7Y3), MTAP_CRYNJ  (Q5KPU2), 
MTAP_DANRE  (Q7ZV22), MTAP_DROME  (Q9V813), MTAP_DROPS  (Q291H4), 
MTAP_EMENI  (C8VP37), MTAP_GLOVI  (Q7NHW1), MTAP_HUMAN  (Q13126), 
MTAP_HYPBU  (A2BIU4), MTAP_LEPIC  (Q72LZ4), MTAP_LEPIN  (Q8CXR2), 
MTAP_MACMU  (F6RQL9), MTAP_MOUSE  (Q9CQ65), MTAP_NECH7  (C7YLQ3), 
MTAP_NEMVE  (A7SN31), MTAP_NEUCR  (Q7RZA5), MTAP_NITMS  (A9A3N5), 
MTAP_PROMA  (Q7VDN6), MTAP_PYRAB  (Q9V2F1), MTAP_PYRFU  (Q8U4Q8), 
MTAP_PYRHO  (O57865), MTAP_PYRKO  (Q5JEQ6), MTAP_RHORT  (Q2RXH9), 
MTAP_SCHPO  (Q09816), MTAP_SCLS1  (A7EAA1), MTAP_SULSO  (Q97W94), 
MTAP_THEAC  (Q9HL98), MTAP_THEPD  (A1RXU2), MTAP_TUBMM  (D5GFR0), 
MTAP_USTMA  (Q4PH43), MTAP_YARLI  (Q6CES3), MTAP_YEAST  (Q07938), 
MTIP_METJA  (Q60367), MTIP_PSEAE  (Q9HZK1), MTIP_PSESM  (Q87ZC3), 
MTIP_XANCP  (Q8PB40), MTIP_XYLFA  (Q9PAZ2), MTIP_XYLFT  (Q87BR7), 
PNPH_AQUAE  (O66839), PNPH_BOVIN  (P55859), PNPH_DICTD  (B8E181), 
PNPH_HUMAN  (P00491), PNPH_MOUSE  (P23492), PNPH_PYRFU  (Q8U2I1), 
PNPH_PYRKO  (Q5JJB8), PNPH_RAT    (P85973), PNPH_YEAST  (Q05788), 
PUNA_BACSU  (P46354), PUNA_CELSP  (P81989), PUNA_GEOSE  (P77834), 
PUNA_MYCBO  (P0A539), PUNA_MYCLE  (P46862), PUNA_MYCTU  (P0A538), 
XAPA_ECOLI  (P45563), YPE2_RHORU  (P23139)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
MTAP_BRAJA  (Q89VT5), MTAP_GEOSL  (Q74E52), MTAP_KORVE  (Q1INC3), 
MTAP_MYCS2  (A0QR54), MTAP_MYCTU  (O06401), MTAP_PHANO  (Q0U796), 
MTAP_PYRAE  (Q8ZTB2), MTAP_RHOS4  (Q3J5E8), MTAP_SYNY3  (P0DJF8), 
MTAP_SYNYG  (P0DJF9), MTAP_THEEB  (Q8DJE4), MTAP_XENTR  (F6V515), 
MTIP_METAC  (Q8TQX8), MTIP_METKA  (Q8TZB4), MTIP_METTH  (O27633), 
MTIP_THEYD  (B5YKP5), PNPH_ARCFU  (O28486), PNPH_DROME  (Q8IMU4), 
PNPH_DROPS  (Q297F5), PNPH_KORCO  (B1L719), PNPH_MOOTA  (Q2RKL6), 
PNPH_SCHPO  (Q9UTG1), PNPH_STRCO  (Q9KYV7)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1A9O; 1A9P; 1A9Q; 1A9R; 1A9S; 1A9T; 1B8N; 1B8O; 1C3X; 1CB0; 1CG6; 1FXU; 1G2O; 1I80; 1K27; 1LV8; 1LVU; 1M73; 1N3I; 1PBN; 1PF7; 1PWY; 1QE5; 1RCT; 1RFG; 1RR6; 1RSZ; 1RT9; 1SD1; 1SD2; 1ULA; 1ULB; 1V2H; 1V3Q; 1V41; 1V45; 1V48; 1VFN; 1WTA; 1YQQ; 1YQU; 1YR3; 1YRY; 2A0W; 2A0X; 2A0Y; 2A8Y; 2AI1; 2AI2; 2AI3; 2OC4; 2OC9; 2ON6; 2Q7O; 2QPL; 3BGS; 3D1V; 3FUC; 3GB9; 3GGS; 3INY; 3IOM; 3K8O; 3K8Q; 3OZC; 3OZD; 3OZE; 3PHB; 3PNP; 3SCZ; 3T94; 4EAR; 4EB8; 4ECE; 4GKA; 4PNP;

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