Entry: PS01245

General information about the entry
Entry name RIO1
Accession number PS01245
Entry type PATTERN
Date NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00958
Name and characterization of the entry
DescriptionRIO1/ZK632.3/MJ0444 family signature.
Pattern [LIVMY]-[VI]-H-[GA]-D-[LF]-[SN]-E-[FY]-N-x-[LIVM].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 18 hits in 18 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 18 hits in 18 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 3
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 85.71 %
Comments
  • Taxonomic range: Archaea, Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RIO1_ARCFU  (O28471), RIO1_DICDI  (Q54VD8), RIO1_ENCCU  (Q8SVI7), 
RIO1_METJA  (Q57886), RIO1_SCHPO  (O42650), RIO1_THEAC  (Q03021), 
RIO1_YEAST  (Q12196), RIO2_DICDI  (Q54T05), RIO2_METJA  (Q58473), 
RIO2_SCHPO  (Q9P7W5), RIOK1_HUMAN (Q9BRS2), RIOK1_MOUSE (Q922Q2), 
RIOK2_HUMAN (Q9BVS4), RIOK2_MOUSE (Q9CQS5), RIOK3_BOVIN (Q1RMT7), 
RIOK3_HUMAN (O14730), RIOK3_MOUSE (Q9DBU3), YOT3_CAEEL  (P34649)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
BUD32_DEBHA (Q6BHA8), RIO2_ARCFU  (O30245), RIO2_YEAST  (P40160)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 3RE4;

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