Entry: PS01251

Forthcoming changes to the profile format
General information about the entry

Entry name [info] PCNA_1
Accession [info] PS01251
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00265

Name and characterization of the entry

Description [info] Proliferating cell nuclear antigen signature 1.
Pattern [info]
[GSTA]-[LIVMF]-x-[LIVMAS]-x-[GSAVI]-[LIVM]-[DS]-x-[NSAED]-[HKRNS]-[VIT]-
x-[LMYF]-[VIGAL]-x-[LIVMF]-x-[LIVM]-x(4)-F.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 81 in 81 different sequences
Number of true positive hits 81 in 81 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.65 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
81 sequences

PCNA1_AERPE (Q9YFT8), PCNA1_ARATH (Q9M7Q7), PCNA1_DAUCA (Q00268), 
PCNA1_PBCV1 (Q84513), PCNA1_PYRAE (Q8ZTY0), PCNA1_SULAC (Q4JAI6), 
PCNA1_SULOH (P57762), PCNA1_SULTO (Q975N2), PCNA1_THEKO (Q5JF32), 
PCNA2_AERPE (Q9Y9V7), PCNA2_ARATH (Q9ZW35), PCNA2_DAUCA (Q00265), 
PCNA2_PBCV1 (O41056), PCNA2_SULAC (Q4J9A8), PCNA2_SULSO (Q97Z84), 
PCNA2_THEKO (Q5JFD3), PCNA3_SULSO (P57765), PCNA3_SULTO (Q973F5), 
PCNA_ANGJA  (Q9W644), PCNA_ARCFU  (O29912), PCNA_BOMMO  (O01377), 
PCNA_BOVIN  (Q3ZBW4), PCNA_BRANA  (Q43124), PCNA_CAEEL  (O02115), 
PCNA_CATRO  (P24314), PCNA_CHICK  (Q9DEA3), PCNA_COTJA  (Q9DDF1), 
PCNA_CRIGR  (P57761), PCNA_DANRE  (Q9PTP1), PCNA_DROME  (P17917), 
PCNA_HALMA  (Q9P9H8), PCNA_HALS3  (B0R7F7), PCNA_HALSA  (Q9HN45), 
PCNA_HAPBU  (Q6B6N4), PCNA_HUMAN  (P12004), PCNA_MACFA  (P61258), 
PCNA_MAIZE  (Q43266), PCNA_META3  (A6UUW0), PCNA_METAC  (Q8TUF7), 
PCNA_METBF  (Q46E39), PCNA_METBU  (Q12U18), PCNA_METJA  (Q57697), 
PCNA_METKA  (Q8TWK3), PCNA_METM5  (A4G0K8), PCNA_METM6  (A9A8V2), 
PCNA_METM7  (A6VHX7), PCNA_METMA  (Q8PX25), PCNA_METMP  (Q6LWJ8), 
PCNA_METS3  (A5UMB4), PCNA_METST  (Q2NE55), PCNA_METTH  (O27367), 
PCNA_METTP  (A0B7Y8), PCNA_METVS  (A6UQZ4), PCNA_MOUSE  (P17918), 
PCNA_NATPD  (Q3IU15), PCNA_NPVAC  (P11038), PCNA_NPVOP  (O10308), 
PCNA_ORYSJ  (P17070), PCNA_PEA    (O82134), PCNA_PICTO  (Q6KZF1), 
PCNA_PLAF7  (P61074), PCNA_PLAFK  (P31008), PCNA_POPNI  (Q9MAY3), 
PCNA_PYRAB  (Q9UYX8), PCNA_PYRFU  (O73947), PCNA_PYRHO  (O58398), 
PCNA_RAT    (P04961), PCNA_SARCR  (O16852), PCNA_SCHPO  (Q03392), 
PCNA_SOYBN  (P22177), PCNA_STYCL  (P53358), PCNA_THEAC  (Q9HJQ0), 
PCNA_THEFM  (Q9UWR9), PCNA_THEGJ  (C5A5N6), PCNA_THEON  (B6YVZ1), 
PCNA_THESM  (C6A1Y5), PCNA_THEVO  (Q979S2), PCNA_TOBAC  (O82797), 
PCNA_UNCMA  (Q0W2J4), PCNA_XENLA  (P18248), PCNA_YEAST  (P15873)
» More

UniProtKB/Swiss-Prot
False negative sequences
17 sequences

PCNA1_SULSO (P57766), PCNA2_PYRAE (Q8ZYL6), PCNA2_SULOH (P57763), 
PCNA2_SULTO (Q975M2), PCNA3_AERPE (Q9YEZ5), PCNA_CENSY  (A0RXH7), 
PCNA_HALLT  (B9LU30), PCNA_HALWD  (Q18E60), PCNA_METB6  (A7I849), 
PCNA_METHJ  (Q2FNX1), PCNA_METLZ  (A2SSW6), PCNA_METMJ  (A3CVJ2), 
PCNA_METPE  (B8GG80), PCNA_MIMIV  (Q7T6Y0), PCNA_NANEQ  (Q74MV1), 
PCNA_NITMS  (A9A2X4), PCNA_THEPD  (A1RXU8)
» More

PDB
[Detailed view]
53 PDB

1AXC; 1GE8; 1ISQ; 1IZ4; 1IZ5; 1PLQ; 1PLR; 1RWZ; 1RXM; 1RXZ; 1SXJ; 1U76; 1U7B; 1UD9; 1UL1; 1VYJ; 1VYM; 1W60; 2HII; 2HIK; 2IJX; 2IO4; 2IX2; 2IZO; 2NTI; 2OD8; 2ZVK; 2ZVL; 2ZVM; 2ZVV; 2ZVW; 3AIX; 3AIZ; 3F1W; 3FDS; 3GPM; 3GPN; 3L0W; 3L0X; 3L10; 3LX1; 3LX2; 3P83; 3P87; 3PGE; 3TBL; 3V60; 3V61; 3V62; 3VKX; 3WGW; 4HK1; 4L60
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission