Entry: PS01251

General information about the entry

Entry name [info] PCNA_1
Accession [info] PS01251
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00265

Name and characterization of the entry

Description [info] Proliferating cell nuclear antigen signature 1.
Pattern [info]
[GSTA]-[LIVMF]-x-[LIVMAS]-x-[GSAVI]-[LIVM]-[DS]-x-[NSAED]-[HKRNS]-[VIT]-
x-[LMYF]-[VIGAL]-x-[LIVMF]-x-[LIVM]-x(4)-F.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 81 in 81 different sequences
Number of true positive hits 81 in 81 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.65 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
81 sequences

PCNA1_AERPE (Q9YFT8    ), PCNA1_ARATH (Q9M7Q7    ), PCNA1_DAUCA (Q00268    ), 
PCNA1_PBCV1 (Q84513    ), PCNA1_PYRAE (Q8ZTY0    ), PCNA1_SULAC (Q4JAI6    ), 
PCNA1_SULOH (P57762    ), PCNA1_SULTO (Q975N2    ), PCNA1_THEKO (Q5JF32    ), 
PCNA2_AERPE (Q9Y9V7    ), PCNA2_ARATH (Q9ZW35    ), PCNA2_DAUCA (Q00265    ), 
PCNA2_PBCV1 (O41056    ), PCNA2_SULAC (Q4J9A8    ), PCNA2_SULSO (Q97Z84    ), 
PCNA2_THEKO (Q5JFD3    ), PCNA3_SULSO (P57765    ), PCNA3_SULTO (Q973F5    ), 
PCNA_ANGJA  (Q9W644    ), PCNA_ARCFU  (O29912    ), PCNA_BOMMO  (O01377    ), 
PCNA_BOVIN  (Q3ZBW4    ), PCNA_BRANA  (Q43124    ), PCNA_CAEEL  (O02115    ), 
PCNA_CATRO  (P24314    ), PCNA_CHICK  (Q9DEA3    ), PCNA_COTJA  (Q9DDF1    ), 
PCNA_CRIGR  (P57761    ), PCNA_DANRE  (Q9PTP1    ), PCNA_DROME  (P17917    ), 
PCNA_HALMA  (Q9P9H8    ), PCNA_HALS3  (B0R7F7    ), PCNA_HALSA  (Q9HN45    ), 
PCNA_HAPBU  (Q6B6N4    ), PCNA_HUMAN  (P12004    ), PCNA_MACFA  (P61258    ), 
PCNA_MAIZE  (Q43266    ), PCNA_META3  (A6UUW0    ), PCNA_METAC  (Q8TUF7    ), 
PCNA_METAR  (Q0W2J4    ), PCNA_METBF  (Q46E39    ), PCNA_METBU  (Q12U18    ), 
PCNA_METJA  (Q57697    ), PCNA_METKA  (Q8TWK3    ), PCNA_METM5  (A4G0K8    ), 
PCNA_METM6  (A9A8V2    ), PCNA_METM7  (A6VHX7    ), PCNA_METMA  (Q8PX25    ), 
PCNA_METMP  (Q6LWJ8    ), PCNA_METS3  (A5UMB4    ), PCNA_METST  (Q2NE55    ), 
PCNA_METTH  (O27367    ), PCNA_METTP  (A0B7Y8    ), PCNA_METVS  (A6UQZ4    ), 
PCNA_MOUSE  (P17918    ), PCNA_NATPD  (Q3IU15    ), PCNA_NPVAC  (P11038    ), 
PCNA_NPVOP  (O10308    ), PCNA_ORYSJ  (P17070    ), PCNA_PEA    (O82134    ), 
PCNA_PICTO  (Q6KZF1    ), PCNA_PLAF7  (P61074    ), PCNA_PLAFK  (P31008    ), 
PCNA_POPNI  (Q9MAY3    ), PCNA_PYRAB  (Q9UYX8    ), PCNA_PYRFU  (O73947    ), 
PCNA_PYRHO  (O58398    ), PCNA_RAT    (P04961    ), PCNA_SARCR  (O16852    ), 
PCNA_SCHPO  (Q03392    ), PCNA_SOYBN  (P22177    ), PCNA_STYCL  (P53358    ), 
PCNA_THEAC  (Q9HJQ0    ), PCNA_THEFM  (Q9UWR9    ), PCNA_THEGJ  (C5A5N6    ), 
PCNA_THEON  (B6YVZ1    ), PCNA_THESM  (C6A1Y5    ), PCNA_THEVO  (Q979S2    ), 
PCNA_TOBAC  (O82797    ), PCNA_XENLA  (P18248    ), PCNA_YEAST  (P15873    )
» more

UniProtKB/Swiss-Prot
False negative sequences
17 sequences

PCNA1_SULSO (P57766    ), PCNA2_PYRAE (Q8ZYL6    ), PCNA2_SULOH (P57763    ), 
PCNA2_SULTO (Q975M2    ), PCNA3_AERPE (Q9YEZ5    ), PCNA_CENSY  (A0RXH7    ), 
PCNA_HALLT  (B9LU30    ), PCNA_HALWD  (Q18E60    ), PCNA_METB6  (A7I849    ), 
PCNA_METHJ  (Q2FNX1    ), PCNA_METLZ  (A2SSW6    ), PCNA_METMJ  (A3CVJ2    ), 
PCNA_METPE  (B8GG80    ), PCNA_MIMIV  (Q7T6Y0    ), PCNA_NANEQ  (Q74MV1    ), 
PCNA_NITMS  (A9A2X4    ), PCNA_THEPD  (A1RXU8    )
» more

PDB
[Detailed view]
65 PDB

1AXC; 1GE8; 1ISQ; 1IZ4; 1IZ5; 1PLQ; 1PLR; 1RWZ; 1RXM; 1RXZ; 1SXJ; 1U76; 1U7B; 1UD9; 1UL1; 1VYJ; 1VYM; 1W60; 2HII; 2HIK; 2IJX; 2IO4; 2IX2; 2IZO; 2NTI; 2OD8; 2ZVK; 2ZVL; 2ZVM; 2ZVV; 2ZVW; 3AIX; 3AIZ; 3F1W; 3FDS; 3GPM; 3GPN; 3JA9; 3L0W; 3L0X; 3L10; 3LX1; 3LX2; 3P83; 3P87; 3PGE; 3TBL; 3V60; 3V61; 3V62; 3VKX; 3WGW; 4D2G; 4HK1; 4L60; 4L6P; 4RJF; 4YHR; 4ZTD; 5DA7; 5DAI; 5E0T; 5E0U; 5E0V; 5IY4
» more

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