Entry: PS01264

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General information about the entry

Entry name [info] TBOX_2
Accession [info] PS01264
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00972

Name and characterization of the entry

Description [info] T-box domain signature 2.
Pattern [info]
[LIVMFYWE]-H-[PADHL]-[DENQRS]-[GSE]-x(3)-G-x(2)-[WL]-[ML]-x(3)-[IVA]-x-F.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 93 in 93 different sequences
Number of true positive hits 93 in 93 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 91.18 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
93 sequences

BRAC1_BRAFL (Q17134), BRAC2_BRAFL (P80492), BRACA_DANRE (Q07998), 
BRAC_CANFA  (Q9GL27), BRAC_CHICK  (P79777), BRAC_HALRO  (P56158), 
BRAC_HEMPU  (Q25113), BRAC_HUMAN  (O15178), BRAC_MOUSE  (P20293), 
BRAC_XENLA  (P24781), BRA_PATPE   (Q9U903), BRC2_HALRO  (O01409), 
BYN_DROME   (P55965), EOMES_HUMAN (O95936), EOMES_MOUSE (O54839), 
EOMES_XENLA (P79944), MGAP_HUMAN  (Q8IWI9), MGAP_MOUSE  (A2AWL7), 
OMB_DROME   (Q24432), TBR1_HUMAN  (Q16650), TBR1_MOUSE  (Q64336), 
TBX10_HUMAN (O75333), TBX10_MOUSE (Q810F8), TBX11_CAEEL (Q20257), 
TBX12_CAEEL (P90971), TBX15_HUMAN (Q96SF7), TBX15_MOUSE (O70306), 
TBX18_HUMAN (O95935), TBX18_MOUSE (Q9EPZ6), TBX19_CANFA (Q5XNS0), 
TBX19_HUMAN (O60806), TBX19_MOUSE (Q99ME7), TBX1A_XENLA (Q8AX98), 
TBX1B_XENLA (Q32NI9), TBX1_DANRE  (Q8AXX2), TBX1_HUMAN  (O43435), 
TBX1_MOUSE  (P70323), TBX1_XENTR  (Q3SA49), TBX20_CHICK (Q8UW76), 
TBX20_DANRE (Q9I9K7), TBX20_HUMAN (Q9UMR3), TBX20_MOUSE (Q9ES03), 
TBX20_XENLA (Q8AXW8), TBX20_XENTR (Q3SA46), TBX21_HUMAN (Q9UL17), 
TBX21_MOUSE (Q9JKD8), TBX22_HUMAN (Q9Y458), TBX22_MOUSE (Q8K402), 
TBX2A_XENLA (Q9IBC8), TBX2B_XENLA (Q6PCL0), TBX2_CAEEL  (Q19691), 
TBX2_CANFA  (Q863A2), TBX2_DANRE  (Q7ZTU9), TBX2_HUMAN  (Q13207), 
TBX2_MOUSE  (Q60707), TBX2_XENTR  (Q3SA48), TBX30_CAEEL (Q9N2K7), 
TBX32_CAEEL (O61764), TBX35_CAEEL (Q09376), TBX37_CAEEL (Q9U2C9), 
TBX38_CAEEL (Q9XVD5), TBX39_CAEEL (Q9NA56), TBX3_CHICK  (O73718), 
TBX3_HUMAN  (O15119), TBX3_MOUSE  (P70324), TBX3_RAT    (Q7TST9), 
TBX40_CAEEL (Q9NA55), TBX4_CANFA  (Q861Q9), TBX4_HUMAN  (P57082), 
TBX4_MOUSE  (P70325), TBX5A_DANRE (Q9IAK8), TBX5_CHICK  (Q9PWE8), 
TBX5_HUMAN  (Q99593), TBX5_MOUSE  (P70326), TBX5_RAT    (Q5I2P1), 
TBX5_XENLA  (Q9W7C2), TBX6L_CHICK (P79779), TBX6L_DANRE (P79742), 
TBX6_BOVIN  (E1BEA8), TBX6_GORGO  (A1YF56), TBX6_HUMAN  (O95947), 
TBX6_MOUSE  (P70327), TBX6_RAT    (D3ZJK7), TBX6_XENLA  (Q8AV66), 
TBX6_XENTR  (Q66JL1), TBX7_CAEEL  (Q95PX3), TBX8_CAEEL  (Q22292), 
TBX9_CAEEL  (Q22289), TBXT_CHICK  (P79778), VEGTA_XENLA (P87377), 
VEGTB_XENLA (O13161), VEGT_XENBO  (Q98UD2), VEGT_XENTR  (Q28HY0)
» More

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

H15_DROME   (Q94890), TBR1_PATPE  (Q9NL40), TBX18_CAEEL (O02073), 
TBX31_CAEEL (Q9TZL0), TBX33_CAEEL (O45291), TBX34_CAEEL (Q9NAH2), 
TBX36_CAEEL (Q23622), TBX41_CAEEL (Q22813), TBX5_XENTR  (Q3SA47)
» More

PDB
[Detailed view]
5 PDB

1H6F; 1XBR; 2X6U; 2X6V; 4A04

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