Entry: PS01270

General information about the entry
Entry name BAND_7
Accession number PS01270
Entry type PATTERN
Date NOV-1997 (CREATED); DEC-2001 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00977
Name and characterization of the entry
DescriptionBand 7 protein family signature.
Pattern R-x(2)-[LIV]-[SAN]-x(6)-[LIV]-D-x(2)-T-x(2)-W-G-[LIVT]-[KRH]-[LIV]-x- [KRA]-[LIV]-E-[LIV]-[KRQ].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 27 hits in 27 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 27 hits in 27 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 96.43 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
BND7A_AEDAE (Q16TM5), BND7A_ANOGA (Q7PPU9), BND7A_DROME (Q9VZA4), 
MEC2_CAEEL  (Q27433), PODO_HUMAN  (Q9NP85), QMCA_ECO57  (P0AA55), 
QMCA_ECOL6  (P0AA54), QMCA_ECOLI  (P0AA53), QMCA_SHIFL  (P0AA56), 
QMCA_WIGBR  (P0DKS0), STML3_HUMAN (Q8TAV4), STML3_MOUSE (Q6PE84), 
STO1_CAEEL  (Q19200), STO2_CAEEL  (Q19958), STO3_CAEEL  (Q20657), 
STO4_CAEEL  (Q22165), STOM_HUMAN  (P27105), STOM_MOUSE  (P54116), 
UNC1_CAEEL  (Q21190), Y1128_SYNY3 (P72655), Y1420_ARCFU (O28852), 
Y1488_MYCTU (P63693), Y1511_PYRHO (O59180), Y1524_MYCBO (P63694), 
Y658_PYRAB  (Q9V0Y1), Y692_METTH  (O26788), Y827_METJA  (Q58237)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
YH77_SCHPO  (O60121)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 3BK6; 4FVF; 4FVG; 4FVJ;

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