Entry: PS01274

General information about the entry
Entry name COA_TRANSF_2
Accession number PS01274
Entry type PATTERN
Date NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00980
Associated ProRule PRU10034
Name and characterization of the entry
DescriptionCoenzyme A transferases signature 2.
Pattern [LF]-[HQ]-S-E-N-G-[LIVF](2)-[GA].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 23 hits in 23 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 23 hits in 23 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 92.00 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 4,active_site(?)
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ATOA_ECOLI  (P76459), ATOA_HAEIN  (P44874), CTFB_CLOAB  (P23673), 
PCAJ_ACIAD  (Q59091), PCAJ_PSEPK  (P0A101), PCAJ_PSEPU  (P0A102), 
SCO2A_MOUSE (Q9JJN4), SCO2A_RAT   (Q5XIJ9), SCO2B_MOUSE (Q9ESL0), 
SCOB_BACSU  (P42316), SCOB_HELPJ  (Q9ZLE4), SCOB_HELPY  (P56007), 
SCOB_MYCBO  (P63651), SCOB_MYCTU  (P63650), SCOB_XANCB  (B0RVK3), 
SCOB_XANCP  (P0C7I8), SCOT1_HUMAN (P55809), SCOT1_MOUSE (Q9D0K2), 
SCOT1_PIG   (Q29551), SCOT1_RAT   (B2GV06), SCOT2_HUMAN (Q9BYC2), 
SCOT_CAEEL  (Q09450), SCOT_DICDI  (Q54JD9)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
CATJ_PSESB  (Q8VPF2), YODR_BACSU  (O34466)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1M3E; 1O9L; 1OOY; 1OOZ; 1OPE; 2NRB; 2NRC; 3CDK; 3DLX; 3K6M; 3OXO; 3RRL;

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