Entry: PS01282

General information about the entry

Entry name [info] BIR_REPEAT_1
Accession [info] PS01282
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); JUL-1998 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00987

Name and characterization of the entry

Description [info] BIR repeat.
Pattern [info]
[HKEPILVY]-x(2)-R-x(3,7)-[FYW]-x(11,14)-[STAN]-G-[LMF]-x-[FYHDA]-x(4)-
[DESL]-x(2,3)-C-x(2)-C-x(6)-[WA]-x(9)-H-x(4)-[PRSD]-x-C-x(2)-[LIVMA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 83 in 46 different sequences
Number of true positive hits 83 in 46 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 25
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 76.85 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

BIR1A_MOUSE (Q9QWK5    ), BIR1B_MOUSE (Q9QUK4    ), BIR1E_MOUSE (Q9R016    ), 
BIR1F_MOUSE (Q9JIB6    ), BIR1G_MOUSE (Q9JIB3    ), BIR7A_XENLA (Q8JHV9    ), 
BIR7B_XENLA (A9ULZ2    ), BIRC1_HUMAN (Q13075    ), BIRC2_HUMAN (Q13490    ), 
BIRC2_MOUSE (Q62210    ), BIRC3_CANLF (A1E2V0    ), BIRC3_HUMAN (Q13489    ), 
BIRC3_MOUSE (O08863    ), BIRC7_HUMAN (Q96CA5    ), BIRC7_MOUSE (A2AWP0    ), 
BIRC7_XENTR (A9JTP3    ), BIRC8_HUMAN (Q96P09    ), BIRC8_PANTR (Q95M72    ), 
BIR_CHICK   (Q90660    ), DIAP1_DROME (Q24306    ), DIAP2_DROME (Q24307    ), 
IAP1_NPVAC  (P41435    ), IAP1_NPVOP  (O10296    ), IAP1_OSHVF  (Q6R7I2    ), 
IAP3_NPVOP  (P41437    ), IAPL_ASFC1  (P68764    ), IAPL_ASFC3  (O11451    ), 
IAPL_ASFCH  (P68763    ), IAPL_ASFE1  (P69181    ), IAPL_ASFE7  (P69182    ), 
IAPL_ASFH8  (P69183    ), IAPL_ASFL6  (P69184    ), IAPL_ASFM1  (O11452    ), 
IAPL_ASFP5  (P68765    ), IAP_ASFB7   (P69180    ), IAP_ASFK5   (P0C9X4    ), 
IAP_ASFM2   (O11453    ), IAP_ASFP4   (P0C9X5    ), IAP_ASFWA   (P0C9X6    ), 
IAP_GVCPM   (P41436    ), PIAP_PIG    (O62640    ), XIAP_HUMAN  (P98170    ), 
XIAP_MOUSE  (Q60989    ), XIAP_RAT    (Q9R0I6    ), XIAP_XENLA  (A5D8Q0    ), 
XIAP_XENTR  (Q5BKL8    )
» more

UniProtKB/Swiss-Prot
False negative sequences
25 sequences

BI51A_XENLA (Q8JGN5    ), BI51B_XENLA (Q4R1J6    ), BI52A_XENLA (Q50L39    ), 
BI52B_XENLA (Q804H7    ), BIR1_SCHPO  (O14064    ), BIR1_YEAST  (P47134    ), 
BIR51_XENTR (Q28H51    ), BIR52_XENTR (Q28ER3    ), BIRC5_BOVIN (Q6J1J1    ), 
BIRC5_CANLF (Q8I009    ), BIRC5_FELCA (Q6I6F4    ), BIRC5_HUMAN (O15392    ), 
BIRC5_MOUSE (O70201    ), BIRC5_PIG   (Q9GLN5    ), BIRC5_PONAB (Q5RAH9    ), 
BIRC5_RAT   (Q9JHY7    ), BIRC6_HUMAN (Q9NR09    ), BIRC6_MOUSE (O88738    ), 
BIRC8_GORGO (Q95M71    ), IAP2_NPVAC  (P41454    ), IAP2_NPVOP  (O10324    ), 
IAP2_OSHVF  (Q6R7E2    ), IAP3_OSHVF  (Q6R7D0    ), IAP4_OSHVF  (Q6R7C4    ), 
VF193_IIV6  (P47732    )
» more

PDB
[Detailed view]
89 PDB

1C9Q; 1F9X; 1G3F; 1G73; 1I3O; 1JD4; 1JD5; 1JD6; 1NW9; 1OXN; 1OXQ; 1OY7; 1Q4Q; 1QBH; 1SDZ; 1SE0; 1TFQ; 1TFT; 1TW6; 1XB0; 1XB1; 2I3H; 2I3I; 2JK7; 2OPY; 2OPZ; 2POI; 2POP; 2QRA; 2UVL; 2VM5; 2VSL; 3CLX; 3CM2; 3CM7; 3D9T; 3D9U; 3EYL; 3F7G; 3F7H; 3F7I; 3G76; 3GT9; 3GTA; 3HL5; 3M0A; 3M0D; 3M1D; 3MUP; 3OZ1; 3SIP; 3SIQ; 3T6P; 3UW4; 3UW5; 4EB9; 4EC4; 4HY0; 4HY4; 4HY5; 4J3Y; 4J44; 4J45; 4J46; 4J47; 4J48; 4KJU; 4KJV; 4KMN; 4KMP; 4LGE; 4LGU; 4MTI; 4MTZ; 4MU7; 4OXC; 4WVS; 4WVT; 4WVU; 5C0K; 5C0L; 5C3H; 5C3K; 5C7A; 5C7B; 5C7C; 5C7D; 5C83; 5C84
» more

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