Entry: PS01288

General information about the entry

Entry name [info] UPF0027
Accession [info] PS01288
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED; 01-NOV-1997 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00990

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0027 signature.
Pattern [info] 
Q-[LIVM]-x-N-x-A-x-[LIVM]-P-x-I-x(6)-[LIVM]-P-D-x-H-x-G-x-G-x(2)-[IV]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 34 in 34 different sequences
Number of true positive hits 34 in 34 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 75.56 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 34 sequences 

RTCB1_CULQU (B0WCT9    ), RTCB2_CULQU (B0XKF3    ), RTCB_AEDAE  (Q17FP1    ), 

RTCB_ANOGA  (Q7Q412    ), RTCB_BOVIN  (Q5E9T9    ), RTCB_BRAFL  (C3YN79    ), 
RTCB_BRUMA  (A8QC60    ), RTCB_CAEEL  (P90838    ), RTCB_CHLRE  (A8JC00    ), 
RTCB_DANRE  (Q6NZS4    ), RTCB_DICDI  (Q54Y09    ), RTCB_DROME  (Q9VIW7    ), 
RTCB_ECOLI  (P46850    ), RTCB_HUMAN  (Q9Y3I0    ), RTCB_MACFA  (Q4R6X4    ), 
RTCB_METJA  (Q58095    ), RTCB_METKA  (Q8TUS2    ), RTCB_METMP  (Q6LXF9    ), 
RTCB_METTH  (O27634    ), RTCB_MICCC  (C1E9Y5    ), RTCB_MICPC  (C1MI97    ), 
RTCB_MONBE  (A9UXG6    ), RTCB_MOUSE  (Q99LF4    ), RTCB_MYCBO  (P59975    ), 
RTCB_MYCTO  (P9WGW4    ), RTCB_MYCTU  (P9WGW5    ), RTCB_NEMVE  (A7RKF6    ), 
RTCB_PAPAN  (A9CB42    ), RTCB_PIG    (Q19PY3    ), RTCB_RAT    (Q6AYT3    ), 
RTCB_THEAN  (Q4U923    ), RTCB_THEPA  (Q4N1R8    ), RTCB_TRIAD  (B3RID0    ), 
RTCB_XENTR  (Q561P3    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

RTCB1_ENTDS (B0EAV2    ), RTCB1_ENTHI (C4M244    ), RTCB2_ENTDS (B0EIW5    ), 

RTCB2_ENTHI (C4M6T2    ), RTCB_OSTLU  (A4S3S3    ), RTCB_OSTTA  (Q00ZY2    ), 
RTCB_PLABA  (Q4YUZ9    ), RTCB_PLAF7  (Q8IIU6    ), RTCB_PLAKH  (B3L4K9    ), 
RTCB_PLAYO  (Q7RI54    ), RTCB_THAPS  (B8LBM8    )
» more


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