Entry: PS01293

General information about the entry
Entry name NUDIX_COA
Accession number PS01293
Entry type PATTERN
Date NOV-1997 (CREATED); APR-2006 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00695
Name and characterization of the entry
DescriptionNudix CoA signature.
Pattern [LM]-[LF]-T-x-R-[SA]-x(3)-[RK]-x(3)-G-x(3)-F-P-G-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 64 hits in 64 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 64 hits in 64 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 98.46 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
NDX3_CAEEL  (Q23236), NUDL_CITK8  (A8AFP5), NUDL_CROS8  (A7MKE8), 
NUDL_ECO24  (A7ZMT6), NUDL_ECO27  (B7USI8), NUDL_ECO45  (B7MBL9), 
NUDL_ECO55  (B7L6U1), NUDL_ECO57  (Q8XCQ2), NUDL_ECO5E  (B5YQV4), 
NUDL_ECO7I  (B7NSW2), NUDL_ECO81  (B7MVU2), NUDL_ECO8A  (B7M287), 
NUDL_ECOBW  (C4ZZG9), NUDL_ECODH  (B1XH80), NUDL_ECOHS  (A8A110), 
NUDL_ECOK1  (A1ABY1), NUDL_ECOL5  (Q0TH20), NUDL_ECOL6  (Q8FGU5), 
NUDL_ECOLC  (B1J0S5), NUDL_ECOLI  (P43337), NUDL_ECOLU  (B7NBF9), 
NUDL_ECOSE  (B6IBP0), NUDL_ECOSM  (B1LD60), NUDL_ECOUT  (Q1RAX9), 
NUDL_ENT38  (A4WBH1), NUDL_ENTAE  (P43338), NUDL_ERWCT  (Q6D4L1), 
NUDL_ESCF3  (B7LPN4), NUDL_KLEP3  (B5XQ60), NUDL_KLEP7  (A6TAY4), 
NUDL_PHOLL  (Q7N3M0), NUDL_SALA4  (B5F3R6), NUDL_SALCH  (Q57NI6), 
NUDL_SALDC  (B5FTK8), NUDL_SALEP  (B5R2U5), NUDL_SALHS  (B4TKF7), 
NUDL_SALNS  (B4SUL8), NUDL_SALPA  (Q5PNL9), NUDL_SALPB  (A9MVU1), 
NUDL_SALPC  (C0Q309), NUDL_SALPK  (B5BHD1), NUDL_SALSV  (B4TXZ6), 
NUDL_SALTI  (P0A2L0), NUDL_SALTY  (P0A2K9), NUDL_SHIB3  (B2U449), 
NUDL_SHIBS  (Q321V9), NUDL_SHIDS  (Q32FR6), NUDL_SHIF8  (Q0T506), 
NUDL_SHIFL  (Q83L76), NUDL_SHISS  (Q3Z2F4), NUDL_YERE8  (A1JMC0), 
NUDL_YERP3  (A7FJ95), NUDL_YERPA  (Q1C8W1), NUDL_YERPB  (B2K0H0), 
NUDL_YERPE  (Q7CHW2), NUDL_YERPG  (A9R5X2), NUDL_YERPN  (Q1CH51), 
NUDL_YERPP  (A4TKD0), NUDL_YERPS  (Q66BW8), NUDL_YERPY  (B1JP41), 
NUDT7_HUMAN (P0C024), NUDT7_MOUSE (Q99P30), PCD1_YEAST  (Q12524), 
YDH5_SCHPO  (Q92350)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
NUD11_ARATH (Q8LET2)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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