Entry: PS01299

General information about the entry

Entry name [info] EPHRIN_RBD_1
Accession [info] PS01299
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED; 01-NOV-1997 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC01003

Name and characterization of the entry

Description [info] Ephrin receptor-binding (ephrin RBD) domain signature.
Pattern [info] 
[KRQ]-[LF]-[CST]-x-K-[IF]-Q-x-[FY]-[ST]-[PA]-x(3)-G-x-E-F-x(5)-[FY](2)-
x(2)-[SA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 28 in 28 different sequences
Number of true positive hits 28 in 28 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 90.32 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 28 sequences 

EFNA1_HUMAN (P20827    ), EFNA1_MOUSE (P52793    ), EFNA1_PIG   (Q06AS9    ), 

EFNA1_RAT   (P97553    ), EFNA1_XENLA (P52794    ), EFNA2_CHICK (P52802    ), 
EFNA2_DANRE (P79727    ), EFNA2_HUMAN (O43921    ), EFNA2_MOUSE (P52801    ), 
EFNA3_HUMAN (P52797    ), EFNA3_MOUSE (O08545    ), EFNA4_HUMAN (P52798    ), 
EFNA4_MOUSE (O08542    ), EFNA5_CHICK (P52804    ), EFNA5_DANRE (P79728    ), 
EFNA5_HUMAN (P52803    ), EFNA5_MOUSE (O08543    ), EFNA5_RAT   (P97605    ), 
EFNB1_CHICK (O73612    ), EFNB1_HUMAN (P98172    ), EFNB1_MOUSE (P52795    ), 
EFNB1_RAT   (P52796    ), EFNB1_XENLA (O13097    ), EFNB2_DANRE (O73874    ), 
EFNB2_HUMAN (P52799    ), EFNB2_MOUSE (P52800    ), EFNB3_HUMAN (Q15768    ), 
EFNB3_MOUSE (O35393    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

EFN4_CAEBR  (Q624D2    ), EFN4_CAEEL  (O44516    ), EFNA1_BOVIN (Q3ZC64    )


				
	

	

		PDB
[Detailed view]		
		
			23 PDB
			


			1IKO; 1KGY; 1SHW; 1SHX; 2HLE; 2I85; 2VSK; 2VSM; 2WO2; 2WO3; 2X11; 3CZU; 
			
				3D12; 3GXU; 3HEI; 3MBW; 3MX0; 4BK5; 4BKA; 4BKF; 4L0P; 4M4R; 4UF7
			
			

			» more

				
	





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