Entry: PS01299

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General information about the entry

Entry name [info] EPHRIN_RBD_1
Accession [info] PS01299
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC01003

Name and characterization of the entry

Description [info] Ephrin receptor-binding (ephrin RBD) domain signature.
Pattern [info]
[KRQ]-[LF]-[CST]-x-K-[IF]-Q-x-[FY]-[ST]-[PA]-x(3)-G-x-E-F-x(5)-[FY](2)-
x(2)-[SA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 28 in 28 different sequences
Number of true positive hits 28 in 28 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 90.32 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
28 sequences

EFNA1_HUMAN (P20827), EFNA1_MOUSE (P52793), EFNA1_PIG   (Q06AS9), 
EFNA1_RAT   (P97553), EFNA1_XENLA (P52794), EFNA2_CHICK (P52802), 
EFNA2_DANRE (P79727), EFNA2_HUMAN (O43921), EFNA2_MOUSE (P52801), 
EFNA3_HUMAN (P52797), EFNA3_MOUSE (O08545), EFNA4_HUMAN (P52798), 
EFNA4_MOUSE (O08542), EFNA5_CHICK (P52804), EFNA5_DANRE (P79728), 
EFNA5_HUMAN (P52803), EFNA5_MOUSE (O08543), EFNA5_RAT   (P97605), 
EFNB1_CHICK (O73612), EFNB1_HUMAN (P98172), EFNB1_MOUSE (P52795), 
EFNB1_RAT   (P52796), EFNB1_XENLA (O13097), EFNB2_DANRE (O73874), 
EFNB2_HUMAN (P52799), EFNB2_MOUSE (P52800), EFNB3_HUMAN (Q15768), 
EFNB3_MOUSE (O35393)
» More

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

EFN4_CAEBR  (Q624D2), EFN4_CAEEL  (O44516), EFNA1_BOVIN (Q3ZC64)

		
PDB
[Detailed view]
21 PDB

1IKO; 1KGY; 1SHW; 1SHX; 2HLE; 2I85; 2VSK; 2VSM; 2WO2; 2WO3; 2X11; 3CZU; 3D12; 3GXU; 3HEI; 3MBW; 3MX0; 4BK5; 4BKA; 4BKF; 4M4R
» More

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