Entry: PS01309

General information about the entry
Entry name UPF0057
Accession number PS01309
Entry type PATTERN
Date JUL-1998 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC01013
Name and characterization of the entry
DescriptionUncharacterized protein family UPF0057 signature.
Pattern [LIVF]-x-[STAC]-[LIVF](3)-P-[PF]-[LIVA]-[GAV]-[IV]-x(4)-[GKN].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 40 hits in 40 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 40 hits in 40 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ESI3_LOPEL  (P68178), LT01_HORVU  (P68179), LT02_HORVU  (Q9ARD5), 
LTI6A_ORYSJ (Q8H5T6), LTI6B_ORYSI (A2Y075), LTI6B_ORYSJ (Q0DKW8), 
OSR8_ORYSJ  (Q9LRI7), PMP31_SCHPO (O74837), PMP3_ASHGO  (Q75C38), 
PMP3_ASPFU  (Q4WYA5), PMP3_CANAX  (Q9P824), PMP3_CHAGB  (Q2HAR0), 
PMP3_CRYNB  (P0CS19), PMP3_CRYNJ  (P0CS18), PMP3_DEBHA  (Q6BVN0), 
PMP3_GIBZE  (Q4HXT6), PMP3_NEUCR  (Q871V2), PMP3_SCHPO  (Q9C1W4), 
PMP3_YEAST  (P87284), RC21_ARATH  (Q9FE70), RC22_ARATH  (O82232), 
RC23_ARATH  (Q9M095), RC24_ARATH  (Q9SUI0), RCI2A_ARATH (Q9ZNQ7), 
RCI2B_ARATH (Q9ZNS6), RIC1_PHYIN  (Q9Y068), SNA2_YEAST  (P56508), 
SNA3_YEAST  (P14359), SNA4_YEAST  (Q07549), Y1169_SYNY3 (P74805), 
Y567_PSEAE  (Q9I5W9), YAM5_CAEEL  (Q17638), YCU3_CAEEL  (Q22700), 
YCU4_CAEEL  (Q22701), YCU5_CAEEL  (Q22702), YOT0_CAEEL  (P34655), 
YQAE_ECO57  (P0AE44), YQAE_ECOL6  (P0AE43), YQAE_ECOLI  (P0AE42), 
YV31_CAEEL  (Q20516)
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