| General information about the entry |
| Entry name |
UPF0067 |
| Accession number |
PS01320 |
| Entry type |
PATTERN |
| Date |
JUL-1999 (CREATED); JUL-1999 (DATA UPDATE); MAR-2013 (INFO UPDATE).
|
| PROSITE Documentation |
PDOC01024 |
| Name and characterization of the entry |
| Description | Uncharacterized protein family UPF0067 signature.
|
| Pattern |
D-V-x(5)-H-I-[SA]-C-D-x(4)-S-E.
|
| Numerical results |
- UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
- Total number of hits in UniProtKB/Swiss-Prot: 4 hits in 4 different sequences
- Number of hits on proteins that are known to belong to the set under consideration: 4 hits in 4 different sequences
- Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
- Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
- Number of known missed hits: 1
- Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
- Precision (true hits / (true hits + false positives)): 100.00 %
- Recall (true hits / (true hits + false negatives)): 80.00 %
|
| Comments |
- Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
- Maximum known number of repetitions of the pattern in a single protein: 1
- VERSION: 1
|
| Cross-references |
| UniProtKB/Swiss-Prot |
True positive hits:FRMSR_YEAST (P36088), MSRC_ECOLI (P76270), Y507_ZYMMO (O66116),
YTSP_BACSU (O34553) False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):GAFA_DICDI (Q8MTJ7) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
Retrieve the sequence logo from the alignment
|
PDB [Detailed view] |
1F5M; 1VHM; 3KO6; |
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