Entry: PS01329

General information about the entry
Entry name COX6A
Accession number PS01329
Entry type PATTERN
Date JUL-1999 (CREATED); JUL-1999 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC01032
Name and characterization of the entry
DescriptionCytochrome c oxidase subunit VIa signature.
Pattern [LIV]-R-x-K-x-[FYW]-x-W-[GS]-D-G-x-[KH]-[ST]-x-F-x-N.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 15 hits in 15 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 15 hits in 15 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
COX13_SCHPO (O74471), COX13_YEAST (P32799), COX6A_CAEEL (Q20779), 
COX6A_CYPCA (O13082), COX6A_ONCMY (O13085), CX6A1_BOVIN (P13182), 
CX6A1_HUMAN (P12074), CX6A1_MOUSE (P43024), CX6A1_RABIT (Q9TTT7), 
CX6A1_RAT   (P10818), CX6A2_BOVIN (P07471), CX6A2_HUMAN (Q02221), 
CX6A2_MOUSE (P43023), CX6A2_PONAB (Q5RC38), CX6A2_RAT   (P10817)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
COX6A_THUOB (P80975)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1OCC; 1OCO; 1OCR; 1OCZ; 1V54; 1V55; 2DYR; 2DYS; 2EIJ; 2EIK; 2EIL; 2EIM; 2EIN; 2OCC; 2Y69; 2YBB; 2ZXW; 3ABK; 3ABL; 3ABM; 3AG1; 3AG2; 3AG3; 3AG4; 3ASN; 3ASO;

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